Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / aramis-lab/clinicadl issues and pull requests

#548 - Bump black from 24.1.1 to 24.3.0

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago - 2 comments
Labels: dependencies, python

#547 - test to correct sorting with 2 digit

Pull Request - State: closed - Opened by camillebrianceau 8 months ago

#546 - [INFRA] Use ruff instead of black and use codespell

Pull Request - State: closed - Opened by NicolasGensollen 8 months ago

#545 - fix BIDS file format for pet

Pull Request - State: closed - Opened by thibaultdvx 8 months ago - 3 comments

#544 - fix typeerror 543

Pull Request - State: closed - Opened by thibaultdvx 8 months ago

#543 - TypeError: can only concatenate str (not "PosixPath") to str

Issue - State: closed - Opened by thibaultdvx 8 months ago
Labels: bug

#542 - [INFRA] Update isort in pre-commit config

Pull Request - State: closed - Opened by NicolasGensollen 8 months ago

#541 - [INFRA] Use python 3.11 in the readthedocs workflow

Pull Request - State: closed - Opened by NicolasGensollen 8 months ago - 1 comment

#540 - Solve CI pb in random search tests

Pull Request - State: closed - Opened by camillebrianceau 8 months ago

#539 - get-progression turns 2-digits session labels to 3 digits

Issue - State: closed - Opened by thibaultdvx 8 months ago - 1 comment
Labels: bug

#538 - File format not BIDS compliant

Issue - State: closed - Opened by thibaultdvx 8 months ago

#537 - No Hippocampus Mask Available/Compatible

Issue - State: open - Opened by naji-s 9 months ago - 3 comments

#536 - copyright update

Pull Request - State: closed - Opened by thibaultdvx 9 months ago

#534 - Use `setdefault()` method instead of looping over default dict

Pull Request - State: closed - Opened by thibaultdvx 9 months ago

#533 - Use `setdefault()` method instead of looping over default dict

Issue - State: closed - Opened by NicolasGensollen 9 months ago
Labels: good first issue

#531 - Documentation copyright is outdated

Issue - State: closed - Opened by NicolasGensollen 9 months ago
Labels: documentation, good first issue

#530 - Release 1.6.0

Pull Request - State: closed - Opened by camillebrianceau 9 months ago

#529 - resolve issue

Pull Request - State: closed - Opened by camillebrianceau 9 months ago

#528 - test sofiene ci pull request copy

Pull Request - State: closed - Opened by camillebrianceau 9 months ago

#526 - Update CHANGELOG for release 1.6.0

Pull Request - State: closed - Opened by camillebrianceau 9 months ago

#525 - Remove clinica dependency

Pull Request - State: closed - Opened by camillebrianceau 10 months ago

#523 - Add an option to skip data leakage check

Pull Request - State: closed - Opened by camillebrianceau 10 months ago

#522 - CI Metrics

Pull Request - State: open - Opened by sofiene26000 10 months ago - 2 comments

#521 - Extract tensor from BIDS

Pull Request - State: closed - Opened by camillebrianceau 10 months ago - 2 comments

#520 - Add option for adaptive learning rate

Pull Request - State: closed - Opened by camillebrianceau 10 months ago

#519 - Bump pillow from 10.1.0 to 10.2.0

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago
Labels: dependencies, python

#518 - ADD modality in clinicaDL (prepare-data)

Pull Request - State: closed - Opened by camillebrianceau 10 months ago - 1 comment

#517 - ClinicaDL cleaning

Pull Request - State: closed - Opened by camillebrianceau 10 months ago - 1 comment

#516 - update dependencies

Pull Request - State: closed - Opened by camillebrianceau 10 months ago

#515 - Expanding Modality Support for ML Classification in ClinicaDL

Issue - State: closed - Opened by souravraha 10 months ago - 1 comment

#514 - Bump jinja2 from 3.1.2 to 3.1.3

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago - 3 comments
Labels: dependencies, python

#513 - Bump gitpython from 3.1.37 to 3.1.41

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago - 5 comments
Labels: dependencies, python

#512 - Bump fonttools from 4.42.1 to 4.43.0

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago - 1 comment
Labels: dependencies, python

#511 - Bump mlflow from 2.8.1 to 2.9.2

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies, python

#510 - Bump mlflow from 2.8.1 to 2.9.1

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago - 1 comment
Labels: dependencies, python

#509 - Bump mlflow from 2.8.1 to 2.9.0

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago - 1 comment
Labels: dependencies, python

#508 - Bump actions/setup-python from 4 to 5

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies, github_actions

#507 - Add option to save model for each epochs

Pull Request - State: closed - Opened by camillebrianceau 12 months ago

#506 - Add option to save model for each epochs

Issue - State: closed - Opened by camillebrianceau 12 months ago

#505 - minor changes

Pull Request - State: closed - Opened by camillebrianceau 12 months ago

#504 - try to update to python 3.11.x

Pull Request - State: closed - Opened by camillebrianceau 12 months ago

#503 - [DOC] Fix a few small typos in the documentation

Pull Request - State: closed - Opened by NicolasGensollen 12 months ago

#502 - Refactoring: First try for data handler

Pull Request - State: closed - Opened by camillebrianceau about 1 year ago - 1 comment

#501 - Bump pyarrow from 13.0.0 to 14.0.1

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies, python

#500 - Bump mlflow from 2.7.1 to 2.8.1

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies, python

#499 - Add missing model methods

Pull Request - State: closed - Opened by camillebrianceau about 1 year ago

#498 - fix adapt bug

Pull Request - State: closed - Opened by camillebrianceau about 1 year ago

#497 - Add others callbacks

Pull Request - State: closed - Opened by camillebrianceau about 1 year ago - 1 comment

#496 - Bump werkzeug from 2.3.7 to 3.0.1

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#495 - Bump urllib3 from 2.0.6 to 2.0.7

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#492 - solve issue #491 t1-volume empty tsv files

Pull Request - State: closed - Opened by camillebrianceau about 1 year ago - 1 comment

#491 - T1-Volume quality check tsv are empty

Issue - State: closed - Opened by MatthieuJoulot about 1 year ago

#490 - Bump gitpython from 3.1.36 to 3.1.37

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#489 - Fully Sharded Data Parallel

Pull Request - State: closed - Opened by ncassereau-idris about 1 year ago - 1 comment

#488 - Rh pythae

Pull Request - State: closed - Opened by ravih18 about 1 year ago - 1 comment

#487 - JZ modification

Pull Request - State: closed - Opened by ravih18 about 1 year ago - 1 comment

#486 - Bump urllib3 from 2.0.5 to 2.0.6

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#485 - Sl dart ssda

Pull Request - State: closed - Opened by sophieloiz about 1 year ago - 1 comment

#484 - Prepare next release (1.5.1)

Pull Request - State: closed - Opened by camillebrianceau about 1 year ago

#483 - Add option to use longitudinal data for validation

Pull Request - State: closed - Opened by camillebrianceau about 1 year ago

#481 - Requirement for 'diagnosis' Column in Generalization Testing with ClinicaDL

Issue - State: open - Opened by mtmmu88 about 1 year ago - 1 comment

#479 - Fix retrocompatibility pb with maps.json

Pull Request - State: closed - Opened by camillebrianceau about 1 year ago

#478 - Retrocompatibility problem with maps.json

Issue - State: closed - Opened by camillebrianceau about 1 year ago
Labels: bug

#477 - Add carbon emissions tracker callback

Pull Request - State: closed - Opened by camillebrianceau about 1 year ago - 1 comment

#475 - Cb issue 471

Pull Request - State: closed - Opened by camillebrianceau about 1 year ago
Labels: bug

#474 - Prepare next release (1.5.0)

Pull Request - State: closed - Opened by camillebrianceau about 1 year ago

#473 - Bump actions/checkout from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, github_actions

#472 - Add carbon emissions tracker option

Pull Request - State: closed - Opened by camillebrianceau about 1 year ago

#471 - categorical split variable flag

Issue - State: closed - Opened by mselimata about 1 year ago - 1 comment

#470 - Fix issue 469

Pull Request - State: closed - Opened by camillebrianceau about 1 year ago

#469 - unsupported operand type(s) for +=: 'PosixPath' and 'str'

Issue - State: closed - Opened by mtmmu88 about 1 year ago - 5 comments

#468 - hugging face

Pull Request - State: closed - Opened by camillebrianceau about 1 year ago - 1 comment

#467 - augmentation cli options

Pull Request - State: closed - Opened by mselimata about 1 year ago - 1 comment

#466 - data augmentation issues

Issue - State: closed - Opened by mselimata about 1 year ago - 1 comment

#465 - Execute SSIM on GPU

Pull Request - State: closed - Opened by ncassereau-idris over 1 year ago

#464 - Fix issues for adapt tool

Pull Request - State: closed - Opened by sophieloiz over 1 year ago - 1 comment

#463 - Cb predict2

Pull Request - State: open - Opened by camillebrianceau over 1 year ago - 1 comment

#462 - add save model output function

Pull Request - State: closed - Opened by camillebrianceau over 1 year ago

#461 - tests remove diagnoses option

Pull Request - State: open - Opened by camillebrianceau over 1 year ago

#460 - Generate artifacts

Pull Request - State: closed - Opened by camillebrianceau over 1 year ago

#459 - clinicadl-pythae

Pull Request - State: open - Opened by camillebrianceau over 1 year ago

#458 - Bump certifi from 2023.5.7 to 2023.7.22

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#457 - Generate - add generate trivial contrast - motion and noise

Pull Request - State: closed - Opened by StephaneMbll over 1 year ago - 1 comment

#456 - Running predict with --overwrite delete the results on all the splits

Issue - State: closed - Opened by ravih18 over 1 year ago
Labels: bug

#455 - pr to test

Pull Request - State: closed - Opened by camillebrianceau over 1 year ago

#454 - clinicadl tsvtools analysis error

Issue - State: closed - Opened by mselimata over 1 year ago - 6 comments

#453 - Cb wandb

Pull Request - State: closed - Opened by camillebrianceau over 1 year ago - 1 comment

#452 - Issue With Installation for ANTS

Issue - State: open - Opened by J-V1 over 1 year ago - 1 comment

#451 - Create CITATION.cff

Pull Request - State: closed - Opened by camillebrianceau over 1 year ago

#450 - Dev rh pythae

Pull Request - State: open - Opened by camillebrianceau over 1 year ago

#449 - test pour les modifs de rh_pythae

Pull Request - State: closed - Opened by camillebrianceau over 1 year ago

#448 - Rh pythae test

Pull Request - State: closed - Opened by camillebrianceau over 1 year ago

#447 - test push ms_predict

Pull Request - State: closed - Opened by camillebrianceau over 1 year ago