Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / aramis-lab/clinicadl issues and pull requests

#648 - Remove TaskManager

Pull Request - State: open - Opened by camillebrianceau 3 months ago

#647 - Monai networks

Pull Request - State: open - Opened by thibaultdvx 3 months ago - 1 comment
Labels: refactoring

#646 - MapsManager cleaning

Pull Request - State: closed - Opened by camillebrianceau 3 months ago

#645 - Update LICENSE.txt to 2024

Pull Request - State: closed - Opened by nburgos 3 months ago

#643 - Optim module

Pull Request - State: closed - Opened by thibaultdvx 4 months ago
Labels: refactoring

#642 - HR caps dataset for mood

Pull Request - State: closed - Opened by camillebrianceau 4 months ago - 1 comment

#641 - HR CAPS DATASET FOR MOOD

Pull Request - State: closed - Opened by camillebrianceau 4 months ago - 1 comment

#640 - Loss functions module

Pull Request - State: closed - Opened by thibaultdvx 4 months ago - 1 comment
Labels: refactoring

#639 - Clinicadl models

Pull Request - State: closed - Opened by thibaultdvx 4 months ago
Labels: refactoring

#638 - Bump sentry-sdk from 1.40.1 to 2.8.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies, python

#637 - MS CAPS MAPS FOR MOOD

Pull Request - State: open - Opened by camillebrianceau 4 months ago

#636 - Bump setuptools from 69.0.3 to 70.0.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies, python

#635 - Bump zipp from 3.17.0 to 3.19.1

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies, python

#634 - Bump certifi from 2024.2.2 to 2024.7.4

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago
Labels: dependencies, python

#633 - Some cleaning with utils files

Pull Request - State: closed - Opened by camillebrianceau 5 months ago
Labels: refactoring

#632 - Some cleaning with utils files

Pull Request - State: closed - Opened by camillebrianceau 5 months ago

#631 - Pb with Predict

Pull Request - State: open - Opened by camillebrianceau 5 months ago
Labels: refactoring

#630 - Some cleaning 2

Pull Request - State: open - Opened by camillebrianceau 5 months ago
Labels: refactoring

#629 - Some cleaning

Pull Request - State: closed - Opened by camillebrianceau 5 months ago
Labels: refactoring

#628 - Add pydantic and change metrics module 1rst part

Pull Request - State: open - Opened by camillebrianceau 5 months ago
Labels: refactoring

#627 - Change file_type dict for a class

Pull Request - State: closed - Opened by camillebrianceau 5 months ago
Labels: refactoring

#626 - CHange extract/preprocessing/modality names

Pull Request - State: closed - Opened by camillebrianceau 5 months ago

#625 - Bump urllib3 from 1.26.18 to 1.26.19

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago
Labels: dependencies, python

#624 - Cb mood24

Pull Request - State: closed - Opened by camillebrianceau 5 months ago

#623 - Trigger tests when undrafted

Pull Request - State: closed - Opened by thibaultdvx 5 months ago

#622 - Cb delete preprocessing dict

Pull Request - State: closed - Opened by camillebrianceau 5 months ago

#621 - rebase

Pull Request - State: closed - Opened by camillebrianceau 5 months ago

#620 - Run unittets and cleaning

Pull Request - State: closed - Opened by thibaultdvx 6 months ago
Labels: refactoring

#619 - Rebase to run unittests on refactoring

Pull Request - State: closed - Opened by thibaultdvx 6 months ago - 1 comment

#618 - [CI] Run unit tests and linter on refactoring branch

Pull Request - State: closed - Opened by NicolasGensollen 6 months ago

#617 - Pythae + VAE from maelys et ravi

Pull Request - State: open - Opened by camillebrianceau 6 months ago

#616 - Clean tasks cli and add update_with_toml method in TrainConfig

Pull Request - State: closed - Opened by thibaultdvx 6 months ago
Labels: refactoring

#615 - Pythae + sample in VAE latent space

Pull Request - State: closed - Opened by msolal 6 months ago

#614 - rebase

Pull Request - State: closed - Opened by camillebrianceau 6 months ago

#613 - rebase dev in mood24

Pull Request - State: closed - Opened by camillebrianceau 6 months ago

#612 - Put resume in trainer

Pull Request - State: closed - Opened by thibaultdvx 6 months ago
Labels: refactoring

#611 - Rebase

Pull Request - State: closed - Opened by thibaultdvx 6 months ago
Labels: refactoring

#610 - Fix issue in compare_folders

Pull Request - State: closed - Opened by thibaultdvx 6 months ago - 1 comment
Labels: bug

#609 - Update quality_check.py

Pull Request - State: closed - Opened by HuguesRoy 6 months ago

#608 - Flag for local tests

Pull Request - State: closed - Opened by thibaultdvx 6 months ago

#607 - rebase

Pull Request - State: closed - Opened by camillebrianceau 6 months ago

#606 - Rebase test

Pull Request - State: closed - Opened by camillebrianceau 6 months ago

#605 - Rebase test

Pull Request - State: closed - Opened by camillebrianceau 6 months ago

#603 - [INFRA] Update the Makefile `check.lock` target

Pull Request - State: closed - Opened by NicolasGensollen 6 months ago

#602 - Reorganize architecture

Pull Request - State: closed - Opened by camillebrianceau 6 months ago - 1 comment
Labels: refactoring

#601 - Cb new architecture

Pull Request - State: closed - Opened by camillebrianceau 6 months ago

#599 - rebase

Pull Request - State: closed - Opened by camillebrianceau 6 months ago - 1 comment

#598 - [CI] Remove duplicated verbose flag in test pipelines

Pull Request - State: closed - Opened by NicolasGensollen 6 months ago

#597 - Cb refactoring rebase

Pull Request - State: closed - Opened by camillebrianceau 6 months ago

#596 - Add flags to run CI tests locally

Pull Request - State: closed - Opened by thibaultdvx 6 months ago
Labels: enhancement

#595 - [CI] Remove all scripts related to Jenkins

Pull Request - State: closed - Opened by NicolasGensollen 6 months ago

#594 - [CI] Remove GPU pipeline from Jenkinsfile

Pull Request - State: closed - Opened by NicolasGensollen 6 months ago

#593 - [CI] Port remaining GPU tests to GitHub Actions

Pull Request - State: closed - Opened by NicolasGensollen 6 months ago

#592 - [CI] Skip tests when PR is in draft mode

Pull Request - State: closed - Opened by NicolasGensollen 6 months ago - 2 comments

#590 - [CI] Test train workflow on GPU machine

Pull Request - State: closed - Opened by NicolasGensollen 6 months ago - 1 comment

#589 - Add enum

Pull Request - State: closed - Opened by camillebrianceau 6 months ago
Labels: refactoring

#588 - Trainer adaptation to data class

Pull Request - State: closed - Opened by camillebrianceau 6 months ago - 1 comment
Labels: refactoring

#587 - Prepare data and quality check adapatation to data class

Pull Request - State: closed - Opened by camillebrianceau 6 months ago - 1 comment
Labels: refactoring

#586 - Predict and interpret adaptation to data class

Pull Request - State: closed - Opened by camillebrianceau 6 months ago - 1 comment
Labels: refactoring

#585 - Interpret pipeline adaptation to data class

Pull Request - State: closed - Opened by camillebrianceau 6 months ago
Labels: refactoring

#584 - Hugging face pipeline adaptation to data class

Pull Request - State: closed - Opened by camillebrianceau 6 months ago
Labels: refactoring

#583 - generate pipeline adaptation to data classes

Pull Request - State: closed - Opened by camillebrianceau 6 months ago
Labels: refactoring

#582 - Generate pipeline adaptation to data class

Pull Request - State: closed - Opened by camillebrianceau 6 months ago

#581 - [CI] Port remaining non GPU tests to GitHub Actions

Pull Request - State: closed - Opened by NicolasGensollen 6 months ago - 1 comment

#580 - Create config folder

Pull Request - State: closed - Opened by camillebrianceau 6 months ago

#579 - Folder organization

Pull Request - State: closed - Opened by camillebrianceau 6 months ago
Labels: refactoring

#578 - Bump requests from 2.31.0 to 2.32.0

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago
Labels: dependencies, python

#577 - Try to parse prepare data config

Pull Request - State: closed - Opened by camillebrianceau 6 months ago - 1 comment
Labels: refactoring

#576 - Bump gunicorn from 21.2.0 to 22.0.0

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago
Labels: dependencies, python

#575 - Bump mlflow from 2.10.1 to 2.12.1

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago
Labels: dependencies, python

#574 - Config class in trainer

Pull Request - State: closed - Opened by thibaultdvx 6 months ago - 1 comment
Labels: refactoring

#573 - [CI] Run tests through GitHub Actions

Pull Request - State: closed - Opened by NicolasGensollen 6 months ago - 3 comments

#572 - BUG in CI tests for prepare_data

Pull Request - State: open - Opened by camillebrianceau 6 months ago - 1 comment

#571 - Bump jinja2 from 3.1.3 to 3.1.4

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#570 - Bump werkzeug from 3.0.1 to 3.0.3

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#569 - Bump tqdm from 4.66.1 to 4.66.3

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#568 - Creation of Prepare Data Config

Pull Request - State: closed - Opened by camillebrianceau 7 months ago

#567 - Clean train cli

Pull Request - State: closed - Opened by thibaultdvx 7 months ago
Labels: refactoring

#566 - Reorganize train folder

Pull Request - State: closed - Opened by thibaultdvx 7 months ago
Labels: refactoring

#565 - Put train pipeline inside CLI files

Pull Request - State: closed - Opened by thibaultdvx 7 months ago
Labels: refactoring

#564 - Cleaning

Pull Request - State: closed - Opened by camillebrianceau 7 months ago
Labels: refactoring

#563 - Creation of GenerateConfig

Pull Request - State: closed - Opened by camillebrianceau 7 months ago
Labels: refactoring

#562 - New caps dataset

Pull Request - State: open - Opened by HuguesRoy 7 months ago - 1 comment
Labels: refactoring

#561 - Trainer config

Pull Request - State: closed - Opened by thibaultdvx 7 months ago - 1 comment
Labels: refactoring

#560 - Add a DataClass for predict pipeline

Pull Request - State: closed - Opened by camillebrianceau 7 months ago - 1 comment
Labels: refactoring

#559 - Creation of the trainer

Pull Request - State: closed - Opened by thibaultdvx 7 months ago - 2 comments
Labels: refactoring

#558 - Bump sqlparse from 0.4.4 to 0.5.0

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#557 - Creation of a PredictManager from MapsManager

Pull Request - State: closed - Opened by camillebrianceau 7 months ago - 1 comment
Labels: refactoring

#556 - add pydantic to dependency

Pull Request - State: closed - Opened by camillebrianceau 7 months ago - 2 comments
Labels: refactoring

#555 - tests for refacto

Pull Request - State: closed - Opened by camillebrianceau 7 months ago

#554 - Bump idna from 3.6 to 3.7

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#553 - Prepare release 1.6.1

Pull Request - State: closed - Opened by camillebrianceau 8 months ago

#552 - Solve issue when saving nifti in interpret command

Pull Request - State: closed - Opened by camillebrianceau 8 months ago

#551 - Bump pillow from 10.2.0 to 10.3.0

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies, python

#550 - change 2 digits session labels to 3 digits

Pull Request - State: closed - Opened by thibaultdvx 8 months ago

#549 - [INFRA] Remove black and isort from dependencies

Pull Request - State: closed - Opened by NicolasGensollen 8 months ago