aplbrain/dotmotif issues and pull requests

#147 - ci: Update python versions

Pull Request - State: closed - Opened by j6k4m8 about 1 month ago

#146 - Bump black from 23.3.0 to 24.3.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#145 - Bump certifi from 2023.7.22 to 2024.7.4

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#144 - Bump tqdm from 4.65.0 to 4.66.3

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#143 - Bump urllib3 from 2.0.6 to 2.2.2

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#142 - Bump requests from 2.31.0 to 2.32.2

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#141 - Bump idna from 3.4 to 3.7

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago - 1 comment
Labels: dependencies

#140 - Remove docker support

Pull Request - State: closed - Opened by j6k4m8 about 1 month ago

#139 - RFC: Removing Neo4j / docker dependency from this library?

Issue - State: closed - Opened by j6k4m8 about 1 month ago - 5 comments

#138 - Support nonexistent attributes instead of throwing a NoneType error

Issue - State: open - Opened by j6k4m8 4 months ago
Labels: bug, NetworkXExecutor, GrandIsoExecutor

#137 - Module Not Foud

Issue - State: closed - Opened by anonimoustt 8 months ago - 3 comments

#136 - Error in motif calculation

Issue - State: closed - Opened by KeremKurban 9 months ago - 2 comments

#135 - Performance on large graphs

Issue - State: open - Opened by KeremKurban 9 months ago - 3 comments

#134 - Bump urllib3 from 2.0.2 to 2.0.6

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies

#133 - Bump certifi from 2023.5.7 to 2023.7.22

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 2 comments
Labels: dependencies

#132 - Bump requests from 2.30.0 to 2.31.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies

#131 - v0.14.0

Pull Request - State: closed - Opened by j6k4m8 over 1 year ago

#130 - fix: enforce json rules on edge and not on node

Pull Request - State: closed - Opened by jakobtroidl almost 2 years ago - 3 comments

#129 - fix: weight edge attribute doesn't throw errors anymore (#127)

Pull Request - State: closed - Opened by jakobtroidl about 2 years ago - 3 comments

#128 - feat: ROI edge constraints for Neuprint Executor (#127)

Pull Request - State: closed - Opened by jakobtroidl about 2 years ago - 3 comments

#127 - Neuprint Executor - Labeling Edges by ROI

Issue - State: closed - Opened by jakobtroidl about 2 years ago - 9 comments
Labels: enhancement, cypher, Neo4jExecutor, NeuPrintExecutor

#126 - Allow users to specify dtypes of columns

Pull Request - State: closed - Opened by j6k4m8 over 2 years ago
Labels: bug, ingest

#125 - Don't cast ingest datatypes to string

Issue - State: closed - Opened by j6k4m8 over 2 years ago
Labels: bug, ingest

#124 - Add tests for ingesters from edgelists

Pull Request - State: closed - Opened by j6k4m8 over 2 years ago - 1 comment
Labels: tests

#123 - Propagate constraints from automorphic vertices

Pull Request - State: closed - Opened by j6k4m8 over 2 years ago
Labels: enhancement

#122 - Add Impossible Constraints validator

Issue - State: open - Opened by j6k4m8 over 2 years ago
Labels: enhancement, validator

#121 - Add macro edge aliases

Pull Request - State: closed - Opened by j6k4m8 over 2 years ago - 1 comment
Labels: enhancement, DSL, parser

#120 - Rewrite tests to parametrize executors

Issue - State: closed - Opened by j6k4m8 over 2 years ago
Labels: good first issue, tests

#119 - Add edge aliasing and edge constraints

Pull Request - State: closed - Opened by j6k4m8 over 2 years ago - 1 comment
Labels: enhancement, DSL, parser, cypher, Neo4jExecutor, NetworkXExecutor, NeuPrintExecutor, GrandIsoExecutor

#118 - Propagate constraints on formally-notated node symmetries

Issue - State: closed - Opened by j6k4m8 over 2 years ago
Labels: enhancement, DSL, parser

#117 - Add offset/limit depagination support to Neo4jExecutor

Issue - State: closed - Opened by j6k4m8 over 2 years ago - 1 comment
Labels: enhancement, Neo4jExecutor, NeuPrintExecutor

#116 - Add special installs to setup

Pull Request - State: closed - Opened by j6k4m8 over 2 years ago - 1 comment
Labels: install

#114 - Move special imports to `extras_require`

Issue - State: closed - Opened by j6k4m8 over 2 years ago
Labels: good first issue, install

#113 - Remove deprecated code and some other code cleanup

Pull Request - State: closed - Opened by j6k4m8 over 2 years ago

#112 - Add node attribute bracket syntax

Pull Request - State: closed - Opened by j6k4m8 over 2 years ago - 1 comment
Labels: parser, cypher, Neo4jExecutor, NeuPrintExecutor

#111 - Filtering By Properties w/ Invalid Characters in the Name

Issue - State: closed - Opened by simonwarchol over 2 years ago - 6 comments
Labels: parser, cypher

#110 - Aliased edges and inter-edge comparisons

Issue - State: closed - Opened by j6k4m8 over 2 years ago - 1 comment
Labels: enhancement, DSL, parser

#109 - Update to use lark cython parser

Pull Request - State: closed - Opened by j6k4m8 over 2 years ago

#108 - Fix grandiso 2.1 compat

Pull Request - State: closed - Opened by j6k4m8 over 2 years ago - 1 comment

#107 - Add initial working multigraph edge validator plus tests

Pull Request - State: closed - Opened by j6k4m8 about 3 years ago - 2 comments
Labels: enhancement, NetworkXExecutor, GrandIsoExecutor

#106 - Add multigraph support to networkx executor

Pull Request - State: closed - Opened by j6k4m8 about 3 years ago - 1 comment

#105 - Update README.md with new dotmotif cite

Pull Request - State: closed - Opened by j6k4m8 over 3 years ago - 1 comment

#104 - Update grandiso to use inlined node attribute matching

Pull Request - State: closed - Opened by j6k4m8 over 3 years ago - 1 comment

#103 - Remove unused files (repo cleanup)

Pull Request - State: closed - Opened by j6k4m8 over 3 years ago

#102 - Upgrade grandiso to use generator API

Pull Request - State: closed - Opened by j6k4m8 over 3 years ago - 1 comment

#101 - MultiDiGraph support

Issue - State: closed - Opened by hpawa over 3 years ago - 1 comment
Labels: enhancement, NetworkXExecutor, GrandIsoExecutor

#100 - Organize tests

Pull Request - State: closed - Opened by j6k4m8 over 3 years ago

#99 - Add edgelist converter

Pull Request - State: closed - Opened by j6k4m8 over 3 years ago

#98 - Update to grandiso 1.1.0

Pull Request - State: closed - Opened by j6k4m8 over 3 years ago - 1 comment

#97 - Upgrade grandiso version to use limits and iterable

Issue - State: closed - Opened by j6k4m8 over 3 years ago - 2 comments
Labels: enhancement, GrandIsoExecutor

#96 - Anonymous motif participants

Issue - State: open - Opened by j6k4m8 over 3 years ago
Labels: enhancement, DSL, parser

#95 - [Neo4j] Add create_index call

Pull Request - State: closed - Opened by j6k4m8 over 3 years ago - 1 comment
Labels: enhancement, cypher, Neo4jExecutor

#94 - Upgrade neo4j

Issue - State: closed - Opened by j6k4m8 over 3 years ago
Labels: Neo4jExecutor, install

#93 - upgrade neo4j to v4.2

Pull Request - State: closed - Opened by j6k4m8 over 3 years ago
Labels: enhancement, Neo4jExecutor, ingest, install

#92 - [Neo4j] Fix negation of in/contains operators in Cypher

Pull Request - State: closed - Opened by j6k4m8 over 3 years ago
Labels: bug, cypher, Neo4jExecutor, NeuPrintExecutor

#91 - Custom entity labels

Pull Request - State: closed - Opened by j6k4m8 over 3 years ago
Labels: enhancement, cypher, Neo4jExecutor, NeuPrintExecutor

#90 - Neo4j: User-defined attribute indices

Issue - State: closed - Opened by j6k4m8 over 3 years ago
Labels: enhancement, Neo4jExecutor

#89 - Fix issue where grammar file was excluded from pip installs

Pull Request - State: closed - Opened by j6k4m8 over 3 years ago
Labels: bug, install

#88 - Add !contains and !in constraint support

Pull Request - State: closed - Opened by j6k4m8 over 3 years ago - 1 comment
Labels: enhancement, DSL, parser

#87 - Negation for "contains" and "in" operators

Issue - State: closed - Opened by j6k4m8 over 3 years ago
Labels: enhancement, DSL

#86 - Error on first query

Issue - State: closed - Opened by lix2k3 almost 4 years ago - 9 comments
Labels: bug, parser, install

#85 - add codecov

Pull Request - State: closed - Opened by j6k4m8 almost 4 years ago

#84 - Add Motif class interface

Pull Request - State: closed - Opened by j6k4m8 almost 4 years ago

#83 - Simplify motif construction code

Issue - State: closed - Opened by j6k4m8 almost 4 years ago
Labels: enhancement, good first issue

#82 - Switch examples to use grandiso by default

Pull Request - State: closed - Opened by j6k4m8 about 4 years ago

#81 - Clean up docs

Pull Request - State: closed - Opened by j6k4m8 about 4 years ago

#80 - Add GrandIso executor

Pull Request - State: closed - Opened by j6k4m8 about 4 years ago

#79 - Add updated nx ingester

Pull Request - State: closed - Opened by j6k4m8 about 4 years ago

#78 - Improve utils#draw_motif

Issue - State: closed - Opened by j6k4m8 about 4 years ago - 1 comment

#77 - Better type-guessing for Neo4j imports

Issue - State: closed - Opened by j6k4m8 about 4 years ago - 1 comment

#76 - Add neuprint executor

Pull Request - State: closed - Opened by j6k4m8 about 4 years ago

#75 - I‘ve no idea how to output the motifs

Issue - State: closed - Opened by qeaneH about 4 years ago - 1 comment

#74 - Dynamic node constraints

Pull Request - State: closed - Opened by j6k4m8 over 4 years ago

#73 - Add tests to github actions

Pull Request - State: closed - Opened by j6k4m8 over 4 years ago

#72 - Add "vanilla" triangle and n-clique count aliases from Hočevar & Demšar 2017

Issue - State: closed - Opened by j6k4m8 over 4 years ago
Labels: enhancement, Neo4jExecutor, NetworkXExecutor

#71 - CSVImport performance improvements

Issue - State: closed - Opened by j6k4m8 over 4 years ago - 1 comment
Labels: enhancement, ingest

#70 - Graph Backend Master List

Issue - State: closed - Opened by j6k4m8 over 4 years ago - 1 comment

#69 - Default import neo4j

Pull Request - State: closed - Opened by j6k4m8 over 4 years ago

#68 - Update networkx version to 2.4

Pull Request - State: closed - Opened by j6k4m8 over 4 years ago

#67 - Expose Neo4jExecutor from default package imports

Issue - State: closed - Opened by j6k4m8 over 4 years ago

#66 - Upgrade to latest version of networkx API

Issue - State: closed - Opened by j6k4m8 over 4 years ago

#65 - Use networkx monomorphisms

Pull Request - State: closed - Opened by j6k4m8 over 4 years ago

#64 - NetworkXExecutor occasionally does not identify any isomorphisms

Issue - State: closed - Opened by j6k4m8 over 4 years ago - 1 comment
Labels: bug, NetworkXExecutor

#63 - Identify subgraph isomorphism bug

Pull Request - State: closed - Opened by j6k4m8 over 4 years ago

#62 - [NetworkXExecutor] Fix nx subgraph matcher code

Pull Request - State: closed - Opened by j6k4m8 over 4 years ago

#61 - No named negative edges

Pull Request - State: closed - Opened by j6k4m8 over 4 years ago

#60 - homogenize code for automorphisms in count/find/to_cypher

Issue - State: closed - Opened by j6k4m8 over 4 years ago
Labels: cypher, Neo4jExecutor

#59 - Fix negative-edge clauses in cypher syntax

Pull Request - State: closed - Opened by j6k4m8 over 4 years ago

#58 - Remove named variables from negative edges

Issue - State: closed - Opened by j6k4m8 almost 5 years ago
Labels: Neo4jExecutor

#57 - Quick fix for Automorphism Doc

Pull Request - State: closed - Opened by jtpdowns almost 5 years ago - 1 comment

#56 - Begin manuscript (MD)

Pull Request - State: closed - Opened by j6k4m8 about 5 years ago

#55 - Add macro syntax advanced usage

Pull Request - State: closed - Opened by j6k4m8 about 5 years ago

#54 - Deprecate old code

Pull Request - State: closed - Opened by j6k4m8 about 5 years ago

#53 - Wait for container boot in Neo4jExecutor

Pull Request - State: closed - Opened by j6k4m8 about 5 years ago
Labels: enhancement, Neo4jExecutor

#52 - Fix automorphism neo4j detector

Pull Request - State: closed - Opened by j6k4m8 about 5 years ago

#51 - Continuing to generalize language for data ingest

Pull Request - State: closed - Opened by j6k4m8 about 5 years ago

#50 - Docs cleanup

Pull Request - State: closed - Opened by j6k4m8 about 5 years ago

#49 - Docs cleanup

Pull Request - State: closed - Opened by j6k4m8 over 5 years ago

#48 - Automatically enrich node attribute constraints when an automorphism is listed

Issue - State: closed - Opened by j6k4m8 over 5 years ago - 1 comment
Labels: enhancement, DSL, parser, validator

#47 - Add constructor flag for automatic automorphism detection

Pull Request - State: closed - Opened by j6k4m8 over 5 years ago
Labels: enhancement

GitHub / aplbrain/dotmotif issues and pull requests