Ecosyste.ms: Issues

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GitHub / apcamargo/taxopy issues and pull requests

#18 - add list of all names to Taxon

Pull Request - State: closed - Opened by mkuhn 5 months ago - 15 comments

#17 - Improve support for the "clade" rank

Issue - State: open - Opened by apcamargo 7 months ago
Labels: bug

#16 - Add support to the new taxdump format

Issue - State: open - Opened by apcamargo 7 months ago
Labels: enhancement

#15 - [Feature Request] Fuzzy name search to taxonomy identifier

Issue - State: closed - Opened by jolespin over 1 year ago - 7 comments

#14 - Problem with duplicate ranks in the lineage

Issue - State: closed - Opened by Midnighter over 1 year ago - 8 comments

#13 - Strip whitespace from text fields

Pull Request - State: closed - Opened by Midnighter about 2 years ago - 2 comments

#12 - Taxon class is unhashable since 0.10.1

Issue - State: closed - Opened by maxibor over 2 years ago - 4 comments

#11 - Fix TypeError: unhashable type: 'Taxon'`: add __hash__ method

Pull Request - State: closed - Opened by maxibor over 2 years ago - 1 comment

#10 - Add Taxopy release to Zenodo

Issue - State: closed - Opened by maxibor over 2 years ago - 1 comment

#9 - Supporting edge contraction

Issue - State: open - Opened by Midnighter over 2 years ago - 3 comments
Labels: enhancement

#8 - Add the option to download from `taxdump_archive`

Issue - State: open - Opened by apcamargo over 2 years ago - 1 comment

#7 - Add a `taxid2child` attribute to the `TaxDb` class

Issue - State: open - Opened by apcamargo over 2 years ago
Labels: enhancement

#6 - Error in creating Taxon object when merged_dmp is not given

Issue - State: closed - Opened by pooranis about 3 years ago - 1 comment
Labels: bug, good first issue

#5 - support synonym or equivalent name when calling taxid_from_name

Issue - State: open - Opened by ShannonDaddy about 3 years ago - 4 comments
Labels: enhancement

#4 - AttributeError: type object 'TaxDb' has no attribute '_merged_dmp'

Issue - State: closed - Opened by ShannonDaddy about 3 years ago - 2 comments

#3 - Handle merged txids

Issue - State: closed - Opened by apcamargo over 3 years ago - 1 comment

#2 - Use integers to represent taxid

Issue - State: closed - Opened by apcamargo over 3 years ago - 6 comments