Ecosyste.ms: Issues
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GitHub / apcamargo/taxopy issues and pull requests
#18 - add list of all names to Taxon
Pull Request -
State: closed - Opened by mkuhn 5 months ago
- 15 comments
#17 - Improve support for the "clade" rank
Issue -
State: open - Opened by apcamargo 6 months ago
Labels: bug
#16 - Add support to the new taxdump format
Issue -
State: open - Opened by apcamargo 6 months ago
Labels: enhancement
#15 - [Feature Request] Fuzzy name search to taxonomy identifier
Issue -
State: closed - Opened by jolespin over 1 year ago
- 7 comments
#14 - Problem with duplicate ranks in the lineage
Issue -
State: closed - Opened by Midnighter over 1 year ago
- 8 comments
#13 - Strip whitespace from text fields
Pull Request -
State: closed - Opened by Midnighter about 2 years ago
- 2 comments
#12 - Taxon class is unhashable since 0.10.1
Issue -
State: closed - Opened by maxibor over 2 years ago
- 4 comments
#11 - Fix TypeError: unhashable type: 'Taxon'`: add __hash__ method
Pull Request -
State: closed - Opened by maxibor over 2 years ago
- 1 comment
#10 - Add Taxopy release to Zenodo
Issue -
State: closed - Opened by maxibor over 2 years ago
- 1 comment
#9 - Supporting edge contraction
Issue -
State: open - Opened by Midnighter over 2 years ago
- 3 comments
Labels: enhancement
#8 - Add the option to download from `taxdump_archive`
Issue -
State: open - Opened by apcamargo over 2 years ago
- 1 comment
#7 - Add a `taxid2child` attribute to the `TaxDb` class
Issue -
State: open - Opened by apcamargo over 2 years ago
Labels: enhancement
#6 - Error in creating Taxon object when merged_dmp is not given
Issue -
State: closed - Opened by pooranis about 3 years ago
- 1 comment
Labels: bug, good first issue
#5 - support synonym or equivalent name when calling taxid_from_name
Issue -
State: open - Opened by ShannonDaddy about 3 years ago
- 4 comments
Labels: enhancement
#4 - AttributeError: type object 'TaxDb' has no attribute '_merged_dmp'
Issue -
State: closed - Opened by ShannonDaddy about 3 years ago
- 2 comments
#3 - Handle merged txids
Issue -
State: closed - Opened by apcamargo over 3 years ago
- 1 comment
#2 - Use integers to represent taxid
Issue -
State: closed - Opened by apcamargo over 3 years ago
- 6 comments
#1 - ExtractionError when running taxopy on several samples in parallel with specified dmp files and keep_files=True
Issue -
State: open - Opened by dawnmy about 4 years ago
- 17 comments