Ecosyste.ms: Issues

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GitHub / aoles/rbioformats issues and pull requests

#43 - Load RBioFormats with an older version of bioformats?

Issue - State: closed - Opened by gvogler 7 months ago - 1 comment
Labels: question

#42 - Null pointer exception the first time calling RBioFormats function

Issue - State: closed - Opened by lambdamoses 9 months ago - 2 comments
Labels: bug :bug:

#41 - initial values vs values after writing/reading are different

Issue - State: closed - Opened by gitdemont 9 months ago - 1 comment
Labels: bug :bug:

#40 - Edit XML metadata

Issue - State: open - Opened by lambdamoses 10 months ago
Labels: enhancement :zap:

#39 - Improve documentation of `read.image`

Issue - State: open - Opened by lambdamoses 10 months ago
Labels: documentation :book:

#37 - `RBioFormats::coreMetadata(x)` does not work but `coreMetadata(x)` does

Issue - State: closed - Opened by lambdamoses 12 months ago - 3 comments

#35 - Fix typo(?) in vignette

Pull Request - State: closed - Opened by PeteHaitch over 1 year ago - 1 comment

#34 - Reading OME-Zarr (OME-NGFF)

Issue - State: open - Opened by lgeistlinger about 2 years ago - 2 comments

#33 - improve timeout behavior on jar download

Pull Request - State: closed - Opened by leej3 about 2 years ago - 4 comments

#32 - increase test coverage

Pull Request - State: closed - Opened by leej3 about 2 years ago - 3 comments

#31 - RBioFormats not working offline

Issue - State: closed - Opened by jkh1 over 2 years ago - 1 comment
Labels: bug :bug:

#30 - Error on install Linux R/4.2.0

Issue - State: open - Opened by stetner over 2 years ago - 2 comments

#29 - Create user cache directory if it doesn't exist

Issue - State: closed - Opened by jkh1 over 2 years ago - 1 comment
Labels: bug :bug:

#28 - Windows installation fails due to missing path

Issue - State: closed - Opened by jkh1 over 2 years ago - 5 comments

#27 - Saving OIB: metadata is lost

Issue - State: open - Opened by hmbotelho over 2 years ago - 2 comments
Labels: bug :bug:

#26 - Installation fails with slow internet, jar download times out

Issue - State: closed - Opened by shazanfar almost 4 years ago

#25 - Fails when downloads.openmicroscopy.org is down

Issue - State: open - Opened by jkh1 over 4 years ago - 12 comments

#24 - Slow to load when internet connection is on

Issue - State: open - Opened by lluisfortes1 over 4 years ago - 1 comment

#23 - RBioFormats library needs internet connection to load

Issue - State: closed - Opened by tvazm over 4 years ago - 5 comments
Labels: bug :bug:

#22 - Installation in R 4.0.0

Issue - State: open - Opened by nalm9 over 4 years ago

#21 - Install failure on Windows

Issue - State: open - Opened by mattiasaine about 5 years ago - 2 comments

#20 - Installation in R 3.6

Issue - State: closed - Opened by TY-Cheng over 5 years ago - 2 comments

#19 - Address issues on Windows

Pull Request - State: closed - Opened by aoles over 5 years ago

#18 - Memory usage RBioformats vs FIJI/bioformats

Issue - State: closed - Opened by gvogler over 5 years ago - 6 comments

#17 - normalize in read.image

Issue - State: open - Opened by manerotoni almost 6 years ago - 1 comment

#16 - write.image does write "empty" image

Issue - State: open - Opened by asauvat almost 6 years ago - 1 comment

#15 - Making amenable to R CMD check

Pull Request - State: open - Opened by muschellij2 about 6 years ago - 1 comment

#14 - Installation under Windows

Issue - State: closed - Opened by aoles over 6 years ago - 22 comments

#13 - RBioFormats on Conda

Issue - State: open - Opened by ajay-bhargava over 6 years ago

#11 - meta data is different between ImageJ and RBioformats

Issue - State: closed - Opened by gvogler almost 7 years ago - 8 comments

#10 - Installation notes

Issue - State: open - Opened by kbarreto almost 7 years ago

#9 - Reading in TIFF stacks

Issue - State: open - Opened by hummuscience about 7 years ago - 1 comment

#8 - Using subset to open images in a list one at a time

Issue - State: closed - Opened by beansprout88 about 7 years ago - 3 comments

#7 - read.image failing for very large images

Issue - State: open - Opened by rossholmberg about 8 years ago - 6 comments

#6 - Get number of frames in a TIFF video without reading into memory

Issue - State: closed - Opened by beansprout88 over 8 years ago - 2 comments

#5 - Subset image in XY dimensions

Issue - State: closed - Opened by MichelV2 over 8 years ago - 9 comments

#4 - Push changes from devel into master

Pull Request - State: closed - Opened by aoles about 9 years ago

#3 - Hi~Need some help with RBioFormats installation problem~

Issue - State: closed - Opened by youkefan18 about 9 years ago - 2 comments

#2 - Error reading cellomics image

Issue - State: closed - Opened by cedunia almost 10 years ago - 1 comment

#1 - Use "latest" jar.

Issue - State: closed - Opened by joshmoore almost 10 years ago - 1 comment