Ecosyste.ms: Issues

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GitHub / aoles/EBImage issues and pull requests

#69 - Package fftw3 was not found in the pkg-config search path.

Issue - State: open - Opened by natyfp about 1 year ago - 1 comment

#68 - question about reading the multiple channels tiff

Issue - State: open - Opened by dingxm about 1 year ago - 1 comment

#67 - fix typo in .Rd

Pull Request - State: open - Opened by jan-glx over 1 year ago - 1 comment

#66 - Quesiton with colorLabels

Issue - State: open - Opened by Jabbar-Campbell over 1 year ago

#65 - index error in ocontour

Issue - State: open - Opened by ma-ho almost 2 years ago - 1 comment
Labels: bug

#64 - Installation issue on windows & closed issue from June 2022

Issue - State: open - Opened by MonicaPala almost 2 years ago - 1 comment

#63 - watershed fails

Issue - State: closed - Opened by felipenorconsult almost 2 years ago - 1 comment
Labels: invalid

#62 - use length.out with seq

Pull Request - State: closed - Opened by LiNk-NY about 2 years ago - 1 comment

#61 - Total Region of Interest Intensity

Issue - State: open - Opened by BioInfQuery over 2 years ago

#60 - use length.out with seq

Pull Request - State: closed - Opened by LiNk-NY over 2 years ago

#59 - Loading Tiff images without scaling

Issue - State: closed - Opened by MathiasBeller over 2 years ago - 2 comments
Labels: question

#58 - Using on-disk array library for @.Data slot?

Issue - State: open - Opened by yeyuan98 almost 3 years ago

#57 - floodFill does not work for ND Arrays

Issue - State: open - Opened by gdkrmr over 3 years ago - 2 comments
Labels: enhancement, help wanted

#56 - installation error

Issue - State: closed - Opened by englianhu over 3 years ago - 3 comments

#54 - filter2 not working with n x 1 matrices

Issue - State: open - Opened by balwierz almost 4 years ago - 2 comments
Labels: bug

#53 - rtiff end of life

Issue - State: closed - Opened by ghost almost 4 years ago

#52 - Where to find EBImage::watershed function code?

Issue - State: closed - Opened by max-poltora about 4 years ago

#51 - Deploy in ShinyApp.io with EBImage

Issue - State: open - Opened by elodiegermani over 4 years ago

#50 - add additional channel to rgbImage

Issue - State: open - Opened by tshicelg almost 5 years ago

#49 - Ask/suggestion Multiple resizing

Issue - State: open - Opened by LucaWRGF about 5 years ago - 1 comment

#48 - Only need display and Image

Issue - State: closed - Opened by Manninm over 5 years ago

#47 - How to add option to floodFill for diagonal neighbors fill?

Issue - State: open - Opened by rafaleo over 5 years ago

#46 - Have some issues with input values for floodfill

Issue - State: closed - Opened by rafaleo over 5 years ago - 6 comments

#45 - package ‘BiocManager’ is not available (for R version 3.3.3)

Issue - State: closed - Opened by rafaleo over 5 years ago - 3 comments

#44 - Question about affine transformation

Issue - State: open - Opened by mkeays over 5 years ago - 3 comments
Labels: investigate

#43 - Export as.nativeRaster?

Issue - State: open - Opened by kuwisdelu over 5 years ago

#41 - Viewer not displaying image in browser mode

Issue - State: open - Opened by jkh1 almost 6 years ago

#40 - Reduce memory consumption

Issue - State: open - Opened by jkh1 almost 6 years ago - 5 comments
Labels: enhancement

#39 - Improved viewer?

Issue - State: closed - Opened by lajoimat almost 6 years ago - 1 comment

#38 - Unable to determine type Filename extension missing.

Issue - State: closed - Opened by jasperDD almost 6 years ago - 1 comment
Labels: question

#37 - Added Shiny.setInputValue() in a few places to make some variables av…

Pull Request - State: open - Opened by jkh1 almost 6 years ago - 11 comments

#36 - Tolerance setting in watershed

Issue - State: closed - Opened by SebastianKasan almost 6 years ago - 2 comments

#35 - Update computeFeatures.Rd

Pull Request - State: open - Opened by federicomarini about 6 years ago

#34 - Adding bg option to watershed

Pull Request - State: open - Opened by rtobar over 6 years ago

#33 - displayOutput hover/click coordinates

Issue - State: open - Opened by markgrujic over 6 years ago - 2 comments
Labels: enhancement, feature request

#32 - Image viewer not shown when running in shiny while not in interactive mode

Issue - State: open - Opened by hcraT over 6 years ago - 2 comments

#31 - Image subsetting fails when called from Rscript

Issue - State: closed - Opened by aoles over 6 years ago
Labels: bug

#30 - 8-connected bwlabels

Issue - State: closed - Opened by nickcee over 6 years ago - 1 comment

#29 - Error

Issue - State: closed - Opened by aditi3112 over 6 years ago - 1 comment

#28 - Can't find EBImage package in R 3.4.3

Issue - State: closed - Opened by niroshar about 7 years ago - 1 comment

#27 - Preserve subclass in `abind` Image-method

Issue - State: closed - Opened by aoles over 7 years ago
Labels: bug

#26 - normalize is buggy - seems to preserve state

Issue - State: closed - Opened by shntnu over 7 years ago - 1 comment

#25 - normalize() does not respect inputRange argument

Issue - State: closed - Opened by ornelles over 7 years ago - 2 comments
Labels: bug

#24 - What is the haralick.scales argument to computeFeatures()?

Issue - State: closed - Opened by dlebauer over 7 years ago - 2 comments
Labels: question

#23 - Check for points out-of-bounds in `floodFill` is incorrect

Issue - State: closed - Opened by AB-Kent over 7 years ago - 2 comments

#22 - Deploy EBImage to Shinyapps.io

Issue - State: closed - Opened by Kiwibp over 7 years ago - 2 comments
Labels: question

#21 - floodFill in place

Issue - State: open - Opened by AB-Kent over 7 years ago - 7 comments
Labels: enhancement

#20 - 3D watershed

Issue - State: open - Opened by rorynolan over 7 years ago - 11 comments
Labels: feature request

#19 - Official EBImage sticker

Issue - State: open - Opened by aoles over 7 years ago - 1 comment

#18 - CLAHE filtering of RGB images

Issue - State: open - Opened by aoles over 7 years ago - 1 comment
Labels: enhancement

#16 - Improve documentation

Issue - State: open - Opened by aoles almost 8 years ago
Labels: enhancement

#15 - Warnings emited by 'readTIFF()' on cells.tiff and nuclei.tiff

Issue - State: open - Opened by aoles almost 8 years ago

#14 - Integrate EBImage image display widget into the package

Issue - State: closed - Opened by aoles almost 8 years ago
Labels: enhancement

#13 - Define `abind` method for Image objects

Issue - State: closed - Opened by aoles almost 8 years ago - 1 comment
Labels: feature request

#12 - any function to do CLAHE ?

Issue - State: closed - Opened by Forrestwang1 almost 8 years ago - 14 comments
Labels: feature request

#11 - Added the ability for different boundary values for different frames

Pull Request - State: closed - Opened by ghaarsma almost 8 years ago - 3 comments

#10 - linear and replicated boundary changes

Pull Request - State: closed - Opened by ghaarsma almost 8 years ago

#9 - fix for filter2 with boundry='replicate'

Pull Request - State: closed - Opened by ghaarsma almost 8 years ago - 1 comment

#8 - filter2 fails with boundry='replicate' and larger then 3x3 filter

Issue - State: closed - Opened by ghaarsma almost 8 years ago - 6 comments

#7 - R Markdown: Error in validImage(x) : object must be an array

Issue - State: closed - Opened by sagacitysite about 8 years ago - 4 comments

#6 - Fix typo

Pull Request - State: closed - Opened by aucuparia over 8 years ago - 1 comment

#5 - Feature request: store file name in Image object

Issue - State: open - Opened by lgatto over 8 years ago
Labels: feature request

#4 - perimeter from computeFeatures.shape is too low

Issue - State: open - Opened by daboe01 over 8 years ago - 6 comments
Labels: enhancement

#3 - Reset user's parameters in displayRaster

Pull Request - State: closed - Opened by EricEdwardBryant almost 9 years ago - 1 comment

#2 - Installation error common.h:5:18: fatal error: tiff.h: No such file or directory

Issue - State: closed - Opened by englianhu over 9 years ago - 7 comments

#1 - Update otsu default 'range' parameter values

Pull Request - State: closed - Opened by pmarais over 9 years ago