Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / angelolab/alpineer issues and pull requests

#48 - Updated NumPy

Pull Request - State: open - Opened by srivarra 7 months ago - 3 comments
Labels: dependencies

#47 - Update Numpy Version

Issue - State: open - Opened by srivarra 7 months ago
Labels: enhancement

#46 - Removed Pytest Dependency

Pull Request - State: closed - Opened by srivarra 11 months ago - 1 comment

#44 - `load_utils.fov_to_ome` is prohibitively slow for large cohorts

Issue - State: open - Opened by alex-l-kong 11 months ago
Labels: enhancement

#43 - `list_files` and `list_folders` fails if non-alphanum character contained in substr

Issue - State: open - Opened by alex-l-kong about 1 year ago
Labels: bug, help wanted

#42 - Added fix to io_utils.list_files function for instances where column …

Pull Request - State: closed - Opened by bryjcannon about 1 year ago - 4 comments

#41 - list_files returns inappropriate fov files

Issue - State: closed - Opened by bryjcannon about 1 year ago - 1 comment
Labels: bug

#40 - MIT License

Pull Request - State: closed - Opened by srivarra over 1 year ago

#39 - MIT License

Issue - State: closed - Opened by srivarra over 1 year ago
Labels: enhancement

#38 - Load Channels with `.` in their name

Pull Request - State: closed - Opened by srivarra over 1 year ago - 1 comment
Labels: bug

#37 - `load_imgs_from_tree` Errors when the file has a `.`

Issue - State: closed - Opened by srivarra over 1 year ago
Labels: bug

#36 - Prevent image rotation during OME tiff conversion

Pull Request - State: closed - Opened by camisowers over 1 year ago
Labels: bug

#35 - ome_to _fov function rotates image

Issue - State: closed - Opened by jonasmac16 over 1 year ago - 2 comments
Labels: enhancement

#34 - Tiled loading bug

Pull Request - State: closed - Opened by camisowers over 1 year ago
Labels: bug

#33 - Load tiled images logic error when missing R1C1

Issue - State: closed - Opened by camisowers over 1 year ago
Labels: bug

#32 - Clarify error message for empty directories in `load_imgs_from_dir`

Pull Request - State: closed - Opened by alex-l-kong over 1 year ago

#31 - Update README.md

Pull Request - State: closed - Opened by srivarra almost 2 years ago

#30 - Next Release - v0.1.7

Pull Request - State: closed - Opened by srivarra almost 2 years ago - 2 comments
Labels: dependencies

#29 - GitHub Actions Updates

Pull Request - State: closed - Opened by srivarra almost 2 years ago - 1 comment
Labels: enhancement

#28 - GitHub Actions Updates

Issue - State: closed - Opened by srivarra almost 2 years ago
Labels: enhancement

#27 - Multiple tiling adjustments

Pull Request - State: closed - Opened by camisowers almost 2 years ago - 2 comments
Labels: enhancement

#26 - Tiled logic bug when provided with a full grid

Issue - State: closed - Opened by camisowers almost 2 years ago
Labels: bug

#25 - Verify Functions account for lists of size `0` and `None`

Pull Request - State: closed - Opened by srivarra almost 2 years ago - 1 comment
Labels: bug

#24 - Get Tiled FOV names regex fix

Pull Request - State: closed - Opened by srivarra almost 2 years ago - 1 comment
Labels: bug

#23 - `load_utils.get_tiled_fov_names` does not handle row,col >= 10

Issue - State: closed - Opened by srivarra almost 2 years ago
Labels: bug

#22 - Multiple uploads to Test PyPI

Pull Request - State: closed - Opened by srivarra almost 2 years ago - 1 comment
Labels: bug

#21 - Cannot upload the same version multiple times to Test PyPI

Issue - State: closed - Opened by srivarra almost 2 years ago

#20 - GitHub Actions

Pull Request - State: closed - Opened by srivarra about 2 years ago - 7 comments
Labels: enhancement

#18 - Loosened Pillow Dependencies

Pull Request - State: closed - Opened by srivarra about 2 years ago
Labels: dependencies

#17 - Make the requirements more flexible

Pull Request - State: closed - Opened by srivarra about 2 years ago
Labels: dependencies

#16 - General Updates to sync with ark-analysis changes

Pull Request - State: closed - Opened by srivarra about 2 years ago
Labels: enhancement

#15 - Add `EXTENSION_TYPES` from `ark.settings`

Issue - State: closed - Opened by srivarra about 2 years ago
Labels: enhancement

#14 - Make requirements more flexible

Issue - State: closed - Opened by ngreenwald about 2 years ago
Labels: enhancement

#13 - Added Utility Functions

Pull Request - State: closed - Opened by srivarra about 2 years ago - 1 comment
Labels: enhancement

#12 - Pinned Matplotlib

Pull Request - State: closed - Opened by srivarra over 2 years ago
Labels: dependencies

#11 - Add `image_utils.py`

Issue - State: closed - Opened by srivarra over 2 years ago
Labels: enhancement

#10 - Added `image_utils`

Pull Request - State: closed - Opened by srivarra over 2 years ago
Labels: enhancement

#9 - Adding Dev Documentation in the README

Issue - State: closed - Opened by srivarra over 2 years ago
Labels: documentation

#8 - README Adjustments

Pull Request - State: closed - Opened by srivarra over 2 years ago
Labels: documentation

#7 - Create release-drafter.yml

Pull Request - State: closed - Opened by srivarra over 2 years ago
Labels: enhancement

#6 - Create toolbox repo to hold general use functions

Issue - State: closed - Opened by ngreenwald almost 3 years ago
Labels: enhancement

#5 - TMI setup

Issue - State: closed - Opened by srivarra almost 3 years ago - 3 comments
Labels: documentation

#4 - Setup/poetry nox

Pull Request - State: closed - Opened by srivarra almost 3 years ago

#3 - Setup/poetry tox

Pull Request - State: closed - Opened by srivarra almost 3 years ago - 1 comment
Labels: dependencies

#2 - Poetry Setup

Pull Request - State: closed - Opened by srivarra almost 3 years ago - 1 comment

#1 - Original Setup based on toffy & ark analysis

Pull Request - State: closed - Opened by srivarra almost 3 years ago