alpha-unito/streamflow issues and pull requests

#232 - Added parameter to choose the deployments to use in pytests

Pull Request - State: closed - Opened by LanderOtto over 1 year ago - 1 comment

#231 - Update CWL v1.2 conformance tests

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago - 1 comment

#230 - Fix Flux Docker version to 0.28.0

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago - 1 comment

#229 - Avoid opening too many SSH sessions

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago - 1 comment

#228 - Bump pytest from 7.4.1 to 7.4.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies, python

#227 - Add configurable time option in HPC connectors

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago - 1 comment

#226 - Bump cwltool from 3.1.20230719185429 to 3.1.20230906142556

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#225 - Fix potential race condition on sqlite `row_factory`

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago - 1 comment

#224 - Fix scheduler behaviour when retry_delay is set

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago - 1 comment

#223 - Fix `template_map` error when service has no file

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago - 1 comment

#222 - Bump antlr4-python3-runtime from 4.13.0 to 4.13.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies, python

#221 - Bump actions/checkout from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, github_actions

#220 - Bump cwl-utils from 0.28 to 0.29

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies, python

#219 - Bump pytest from 7.4.0 to 7.4.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#218 - Bump sphinx from 7.2.4 to 7.2.5

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#217 - Bump pandas from 2.0.3 to 2.1.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#216 - Connector and CWL Runner fixes

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago

#215 - Bump sphinx from 7.2.3 to 7.2.4

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#214 - Fix Python dependencies conflict in Mac OS CI

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago

#213 - Update docs to v0.2.0

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago - 1 comment

#212 - Bump cwltest from 2.3.20230527113600 to 2.3.20230825125225

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#211 - Adjust JSONSchema ids

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago

#210 - Bump sphinx from 7.2.2 to 7.2.3

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#209 - Fix Flux and Mac OS CI steps

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago

#208 - Enable distributed inheritance for plugins

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago - 1 comment

#207 - Bump sphinx-rtd-theme from 1.2.2 to 1.3.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#206 - Bump kubernetes-asyncio from 24.2.3 to 25.11.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#205 - Change jsonschema loader

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago

#204 - Updated MacOS CI in GitHub Actions

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago - 1 comment

#203 - Bump sphinx from 7.1.2 to 7.2.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 3 comments
Labels: dependencies, python

#202 - Bump sphinx from 7.1.2 to 7.2.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#201 - Bump plotly from 5.16.0 to 5.16.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies, python

#200 - Feedback on CWL v1.2.1 requested

Issue - State: closed - Opened by acoleman2000 over 1 year ago

#199 - Bump plotly from 5.15.0 to 5.16.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#198 - Bump mukunku/tag-exists-action from 1.2.0 to 1.3.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, github_actions

#197 - Bump jsonschema from 4.18.6 to 4.19.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#196 - Move black configuration to `pyproject.toml`

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago - 1 comment

#195 - Fix type checking in conftest

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago - 1 comment

#194 - Bump jsonschema from 4.18.4 to 4.18.6

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies, python

#193 - Bump rdflib from 6.3.2 to 7.0.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#192 - Bump sphinx from 7.1.1 to 7.1.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies, python

#191 - Bump pyupgrade from 3.9.0 to 3.10.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies, python

#190 - Bump sphinx from 7.1.0 to 7.1.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#189 - Bump cwltool from 3.1.20230624081518 to 3.1.20230719185429

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#188 - Bump sphinx from 7.0.1 to 7.1.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#187 - Bump aiohttp from 3.8.4 to 3.8.5

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#186 - Bump jsonschema from 4.18.3 to 4.18.4

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#185 - Migrate JSONSchema to Draft 2019-09

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago - 1 comment

#184 - Bump jsonschema from 4.18.0 to 4.18.3

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#183 - Bump jsonschema from 4.18.0 to 4.18.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#182 - Bump pytest-asyncio from 0.21.0 to 0.21.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#181 - Bump jsonschema from 4.18.0 to 4.18.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies, python

#180 - Added type definitions to ext CLI

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago

#179 - Bump flake8-bugbear from 23.6.5 to 23.7.10

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#178 - Bump black from 23.3.0 to 23.7.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#177 - Bump importlib-metadata from 6.7.0 to 6.8.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#176 - Bump pyupgrade from 3.8.0 to 3.9.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#175 - Bump jsonschema from 4.17.3 to 4.18.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#174 - Bump pyupgrade from 3.7.0 to 3.8.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#173 - Bump pandas from 2.0.2 to 2.0.3

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#172 - Bump cwltool from 3.1.20230601100705 to 3.1.20230624081518

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#171 - Bump pytest from 7.3.2 to 7.4.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#170 - Bump asyncssh from 2.13.1 to 2.13.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#169 - Implemented fault tolerance based on Provenance module

Pull Request - State: open - Opened by LanderOtto over 1 year ago - 1 comment

#168 - Updated CWL v1.2 conformance tests

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago

#167 - Bump importlib-metadata from 6.6.0 to 6.7.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#166 - Bump pyupgrade from 3.6.0 to 3.7.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#165 - Bump codespell from 2.2.4 to 2.2.5

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#164 - Handling `allOf` directives in config schemas

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago - 1 comment

#163 - Bump pyupgrade from 3.4.0 to 3.6.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#162 - Bump pytest from 7.3.1 to 7.3.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#161 - Bump plotly from 5.14.1 to 5.15.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#160 - Bump sphinx-rtd-theme from 1.2.1 to 1.2.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#159 - Bump flake8-bugbear from 23.5.9 to 23.6.5

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#158 - Added curl flags in Dockerfile to retry server connection when it fails

Pull Request - State: closed - Opened by LanderOtto over 1 year ago - 1 comment

#157 - Bump cwl-utils from 0.27 to 0.28

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#156 - Bump cwltool from 3.1.20230527103121 to 3.1.20230601100705

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#155 - Bump cwltest from 2.3.20230108193615 to 2.3.20230527113600

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#154 - Bump cwltool from 3.1.20230513155734 to 3.1.20230527103121

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#153 - Bump pandas from 2.0.1 to 2.0.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#152 - Bump cachetools from 5.3.0 to 5.3.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#151 - Adding explicit options to queue connectors

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago

#150 - Added no regression tests for provenance

Pull Request - State: closed - Opened by LanderOtto over 1 year ago - 1 comment

#149 - Bump pytest-cov from 4.0.0 to 4.1.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#148 - Bump sphinx-rtd-theme from 1.2.0 to 1.2.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#147 - Bump antlr4-python3-runtime from 4.12.0 to 4.13.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#146 - Bump kaleido from 0.2.1 to 0.2.1.post1

Pull Request - State: open - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#145 - Added `streamflow ext` subcommand

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago - 1 comment

#144 - Fix `list` and `report` subcommands

Pull Request - State: closed - Opened by GlassOfWhiskey over 1 year ago - 1 comment

#143 - Bump pytest-xdist from 3.3.0 to 3.3.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#142 - Bump cwl-utils from 0.26 to 0.27

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#141 - Bump pytest-xdist from 3.2.1 to 3.3.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#140 - Bump cwltool from 3.1.20230425144158 to 3.1.20230513155734

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#139 - Bump sphinx from 7.0.0 to 7.0.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#138 - Bump cwl-utils from 0.25 to 0.26

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies, python

#137 - Bump flake8-bugbear from 23.3.23 to 23.5.9

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies, python

#136 - Fix additional files in RunCrate provenance

Pull Request - State: closed - Opened by GlassOfWhiskey almost 2 years ago - 1 comment

#135 - Bump pyupgrade from 3.3.2 to 3.4.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies, python

#134 - Added package and version to plugin description

Pull Request - State: closed - Opened by GlassOfWhiskey almost 2 years ago - 1 comment

#133 - Bump cwl-utils from 0.24 to 0.25

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies, python

GitHub / alpha-unito/streamflow issues and pull requests