Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / alpha-unito/streamflow issues and pull requests

#532 - Bump flake8-bugbear from 24.4.26 to 24.8.19

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago - 1 comment
Labels: dependencies, python

#531 - Integrate `uvloop` async engine

Pull Request - State: open - Opened by GlassOfWhiskey about 1 month ago

#530 - Bump importlib-resources from 6.4.2 to 6.4.4

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago - 1 comment
Labels: dependencies, python

#529 - Bump importlib-metadata from 8.2.0 to 8.4.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago - 1 comment
Labels: dependencies, python

#528 - Bump pytest-asyncio from 0.21.2 to 0.24.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago - 1 comment
Labels: dependencies, python

#527 - Bump cachetools from 5.4.0 to 5.5.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago - 1 comment
Labels: dependencies, python

#526 - Bump aiohttp from 3.10.4 to 3.10.5

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago - 1 comment
Labels: dependencies, python

#525 - Bump asyncssh from 2.14.2 to 2.16.0

Pull Request - State: open - Opened by dependabot[bot] about 1 month ago
Labels: dependencies, python

#524 - Bump aiohttp from 3.10.2 to 3.10.4

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago - 1 comment
Labels: dependencies, python

#523 - Bump importlib-resources from 6.4.0 to 6.4.2

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 1 comment
Labels: dependencies, python

#522 - Bump kubernetes-asyncio from 30.3.0 to 30.3.1

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 1 comment
Labels: dependencies, python

#521 - Bump aiohttp from 3.10.1 to 3.10.2

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 1 comment
Labels: dependencies, python

#520 - Bump yattag from 1.15.2 to 1.16.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 1 comment
Labels: dependencies, python

#519 - Bump antlr4-python3-runtime from 4.13.1 to 4.13.2

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 1 comment
Labels: dependencies, python

#518 - Bump sphinx from 7.4.7 to 8.0.2

Pull Request - State: open - Opened by dependabot[bot] about 2 months ago
Labels: dependencies, python

#517 - Bump kubernetes-asyncio from 30.1.1 to 30.3.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 1 comment
Labels: dependencies, python

#516 - Moved `Graph` reference from `CWLTokenProcessor` to `CWLWorkflow`

Pull Request - State: closed - Opened by LanderOtto about 2 months ago - 1 comment

#515 - Added explicit `return` in `_copy_remote_to_remote`

Pull Request - State: closed - Opened by LanderOtto about 2 months ago - 1 comment

#514 - Bump aiohttp from 3.9.5 to 3.10.1

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 1 comment
Labels: dependencies, python

#513 - Bump black from 24.4.2 to 24.8.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 1 comment
Labels: dependencies, python

#512 - Bump pytest from 8.3.1 to 8.3.2

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies, python

#511 - Bump pyupgrade from 3.16.0 to 3.17.0

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago - 1 comment
Labels: dependencies, python

#510 - Bump importlib-metadata from 8.0.0 to 8.2.0

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago - 1 comment
Labels: dependencies, python

#509 - Bump importlib-metadata from 8.0.0 to 8.1.0

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago - 2 comments
Labels: dependencies, python

#508 - Bump bcrypt from 4.1.3 to 4.2.0

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago - 1 comment
Labels: dependencies, python

#507 - Bump plotly from 5.22.0 to 5.23.0

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago - 1 comment
Labels: dependencies, python

#506 - Bump sphinx from 7.4.6 to 7.4.7

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago - 1 comment
Labels: dependencies, python

#505 - Bump pytest from 8.2.2 to 8.3.1

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago - 1 comment
Labels: dependencies, python

#504 - Created `CWLWorkflow` class

Pull Request - State: closed - Opened by LanderOtto 2 months ago - 1 comment

#503 - Bump pytest-asyncio from 0.21.2 to 0.23.8

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies, python

#502 - Bump sphinx from 7.4.5 to 7.4.6

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies, python

#501 - Improved ssh retry mechanism

Pull Request - State: open - Opened by LanderOtto 3 months ago - 1 comment

#500 - Bump sphinx from 7.3.7 to 7.4.5

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 2 comments
Labels: dependencies, python

#499 - Bump cachetools from 5.3.3 to 5.4.0

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies, python

#498 - Bump sphinx from 7.3.7 to 7.4.4

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 2 comments
Labels: dependencies, python

#497 - Bump cwltest from 2.5.20240425111257 to 2.5.20240714110256

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies, python

#496 - Bump sphinx from 7.3.7 to 7.4.3

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies, python

#495 - Bump jsonschema from 4.22.0 to 4.23.0

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies, python

#494 - Bump cwltest from 2.5.20240425111257 to 2.5.20240709060407

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies, python

#493 - Bump cwltool from 3.1.20240508115724 to 3.1.20240708091337

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies, python

#492 - Removed duplicate package import

Pull Request - State: closed - Opened by LanderOtto 3 months ago - 1 comment

#491 - Fixed `CONTENT_LIMIT` checks

Pull Request - State: closed - Opened by LanderOtto 3 months ago - 1 comment

#490 - Bump asyncssh from 2.14.2 to 2.15.0

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies, python

#489 - Bump kubernetes-asyncio from 30.1.0 to 30.1.1

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies, python

#488 - Bump importlib-metadata from 7.2.1 to 8.0.0

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies, python

#487 - Bump importlib-metadata from 7.1.0 to 7.2.1

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies, python

#486 - Bump importlib-metadata from 7.1.0 to 7.2.0

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 2 comments
Labels: dependencies, python

#485 - Bump psutil from 5.9.8 to 6.0.0

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies, python

#484 - Bump docker/build-push-action from 5 to 6

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies, github_actions

#483 - Bump bandit from 1.7.8 to 1.7.9

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies, python

#482 - Update Apptainer version in CI pipeline

Pull Request - State: closed - Opened by GlassOfWhiskey 4 months ago - 1 comment

#481 - Make `ContainerConnector` extend `ConnectorWrapper`

Pull Request - State: closed - Opened by GlassOfWhiskey 4 months ago - 1 comment

#480 - Implementing stacked locations scheduling

Pull Request - State: closed - Opened by GlassOfWhiskey 4 months ago - 1 comment

#479 - Bump kubernetes-asyncio from 29.0.0 to 30.1.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies, python

#478 - Bump pyupgrade from 3.15.2 to 3.16.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies, python

#477 - Added `get_stream_writer` method to `Connector`

Pull Request - State: closed - Opened by GlassOfWhiskey 4 months ago

#476 - Improve performance of local copies

Pull Request - State: closed - Opened by GlassOfWhiskey 4 months ago - 1 comment

#475 - Fix input directory path

Pull Request - State: closed - Opened by LanderOtto 4 months ago - 1 comment

#474 - Optimize scheduling logic

Pull Request - State: closed - Opened by GlassOfWhiskey 4 months ago - 1 comment

#473 - Bump pytest from 8.2.1 to 8.2.2

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies, python

#472 - Fixed output step when it is an empty list

Pull Request - State: closed - Opened by LanderOtto 4 months ago - 1 comment

#471 - Fix remote write

Pull Request - State: closed - Opened by LanderOtto 4 months ago - 1 comment

#470 - Fix `SingularityConnector` environment variables

Pull Request - State: closed - Opened by LanderOtto 4 months ago - 1 comment

#469 - Refactor command tokens

Pull Request - State: closed - Opened by GlassOfWhiskey 4 months ago - 1 comment

#468 - Created a directory to collect the workflow output data

Pull Request - State: open - Opened by LanderOtto 4 months ago - 1 comment

#467 - Fixed `InplaceUpdateRequirement` in the distributed executions

Pull Request - State: open - Opened by LanderOtto 4 months ago - 1 comment

#466 - Fixed optional parameter

Pull Request - State: open - Opened by LanderOtto 4 months ago - 1 comment

#465 - Bump codespell from 2.2.6 to 2.3.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies, python

#464 - Return multiple files from the same output entry in a single local directory

Issue - State: open - Opened by paoloviviani 4 months ago
Labels: enhancement

#463 - Bump pytest-asyncio from 0.21.2 to 0.23.7

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies, python

#462 - Bump pytest from 8.1.1 to 8.2.1

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies, python

#461 - Fixed `workdir` of wrapped deployments

Pull Request - State: closed - Opened by LanderOtto 5 months ago - 1 comment

#460 - Fixed record field name in `CWLObjectTokenProcessor`

Pull Request - State: closed - Opened by LanderOtto 5 months ago - 1 comment

#459 - Fix MacOS X CI pipeline

Pull Request - State: open - Opened by GlassOfWhiskey 5 months ago - 1 comment

#458 - Fixed StreamFlow name

Pull Request - State: closed - Opened by LanderOtto 5 months ago - 1 comment

#457 - Re-introduced log level option in `DockerComposeConnector`

Pull Request - State: closed - Opened by LanderOtto 5 months ago - 1 comment

#456 - Fix `workdir` handling in `SlurmConnector`

Pull Request - State: closed - Opened by GlassOfWhiskey 5 months ago - 1 comment

#455 - Fixed prefix of input union types

Pull Request - State: closed - Opened by LanderOtto 5 months ago - 1 comment

#454 - Bump cwltool from 3.1.20240404144621 to 3.1.20240508115724

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#453 - Added `NoContainerCWLDockerTranslator`

Pull Request - State: closed - Opened by LanderOtto 5 months ago - 1 comment

#452 - Check job status when it terminates

Pull Request - State: closed - Opened by LanderOtto 5 months ago - 1 comment

#451 - Moved the `_retrieve_output` calls inside `try`-`except` clauses

Pull Request - State: closed - Opened by LanderOtto 5 months ago - 1 comment

#450 - Fix PyPI release pipeline

Pull Request - State: closed - Opened by GlassOfWhiskey 5 months ago - 1 comment

#449 - Fixed scheduler timeout in Python<3.11

Pull Request - State: closed - Opened by LanderOtto 5 months ago - 1 comment

#448 - Bump bcrypt from 4.1.2 to 4.1.3

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#447 - Bump jinja2 from 3.1.3 to 3.1.4

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#446 - Fixed `ValueFromTransformer`

Pull Request - State: closed - Opened by LanderOtto 5 months ago - 1 comment

#445 - Bump plotly from 5.21.0 to 5.22.0

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#444 - Bump jsonschema from 4.21.1 to 4.22.0

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#443 - Bump pytest from 8.1.1 to 8.2.0

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 2 comments
Labels: dependencies, python

#442 - Bump flake8-bugbear from 24.4.21 to 24.4.26

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#441 - Bump pytest-xdist from 3.5.0 to 3.6.1

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#440 - Bump black from 24.4.1 to 24.4.2

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#439 - Bump black from 24.4.0 to 24.4.1

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#438 - Bump cwltest from 2.5.20240304113812 to 2.5.20240425111257

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#437 - Bump helm/kind-action from 1.9.0 to 1.10.0

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, github_actions

#436 - Bump flake8-bugbear from 24.2.6 to 24.4.21

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#435 - Bump sphinx from 7.2.6 to 7.3.7

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies, python

#434 - Bump plotly from 5.20.0 to 5.21.0

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies, python

#433 - Bump sphinx from 7.2.6 to 7.3.6

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 2 comments
Labels: dependencies, python