Ecosyste.ms: Issues

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GitHub / alleninstitute/spatial_compare issues and pull requests

#17 - repo cleanup

Issue - State: open - Opened by berl 2 months ago

#16 - clean up dataset notebook

Pull Request - State: closed - Opened by berl 2 months ago

#15 - identify outliers in gene detection in spatial_compare

Issue - State: open - Opened by berl 2 months ago

#14 - add metrics to segmentation comparison

Issue - State: open - Opened by berl 2 months ago

#13 - add mock test for SpatialCompare

Pull Request - State: closed - Opened by berl 3 months ago

#12 - add spatial_compare directory and test

Pull Request - State: closed - Opened by berl 3 months ago

#11 - label composition in relation to detection

Issue - State: open - Opened by berl 3 months ago

#10 - qc mask creation

Issue - State: open - Opened by berl 3 months ago

#9 - heuristics and identifying cutoffs

Issue - State: open - Opened by berl 3 months ago

#6 - add testing for spatial_detection_score

Issue - State: open - Opened by berl 3 months ago

#5 - add testing for segmentation_compare

Issue - State: open - Opened by berl 3 months ago

#4 - working spatial detection score, also cleaning up example notebook

Pull Request - State: closed - Opened by berl 3 months ago

#3 - Integrating cross_seg_comparison into seg_compare script

Pull Request - State: closed - Opened by egelfan2 4 months ago - 4 comments

#2 - Spatial compare class

Pull Request - State: closed - Opened by berl 6 months ago

#1 - scripts for comparing across segmentations

Pull Request - State: closed - Opened by egelfan2 8 months ago