Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / alleninstitute/scrattch.mapping issues and pull requests

#58 - fix hierarchical and Seurat mappings

Pull Request - State: closed - Opened by jeremymiller 3 months ago

#58 - fix hierarchical and Seurat mappings

Pull Request - State: closed - Opened by jeremymiller 3 months ago

#56 - Error corrections and requests for mapping algorithms

Issue - State: open - Opened by jeremymiller 5 months ago - 1 comment

#56 - Error corrections and requests for mapping algorithms

Issue - State: open - Opened by jeremymiller 5 months ago - 1 comment

#55 - added comments and fixed anndata path

Pull Request - State: closed - Opened by inkarkapen 6 months ago

#55 - added comments and fixed anndata path

Pull Request - State: closed - Opened by inkarkapen 6 months ago

#54 - Update README.md

Pull Request - State: closed - Opened by UCDNJJ 6 months ago

#54 - Update README.md

Pull Request - State: closed - Opened by UCDNJJ 6 months ago

#53 - added query data and python env

Pull Request - State: closed - Opened by inkarkapen 6 months ago

#53 - added query data and python env

Pull Request - State: closed - Opened by inkarkapen 6 months ago

#52 - python set up update in zzz

Pull Request - State: closed - Opened by inkarkapen 7 months ago

#52 - python set up update in zzz

Pull Request - State: closed - Opened by inkarkapen 7 months ago

#51 - updated readme

Pull Request - State: closed - Opened by inkarkapen 7 months ago

#51 - updated readme

Pull Request - State: closed - Opened by inkarkapen 7 months ago

#50 - updated docker

Pull Request - State: closed - Opened by inkarkapen 7 months ago

#50 - updated docker

Pull Request - State: closed - Opened by inkarkapen 7 months ago

#49 - Reorganized code and modified get precomp stats to take a list

Pull Request - State: closed - Opened by inkarkapen 7 months ago

#49 - Reorganized code and modified get precomp stats to take a list

Pull Request - State: closed - Opened by inkarkapen 7 months ago

#48 - Adding mapmycells (map)

Pull Request - State: closed - Opened by inkarkapen 8 months ago

#48 - Adding mapmycells (map)

Pull Request - State: closed - Opened by inkarkapen 8 months ago

#47 - Inkar hann python tutorial

Pull Request - State: closed - Opened by inkarkapen 10 months ago

#47 - Inkar hann python tutorial

Pull Request - State: closed - Opened by inkarkapen 10 months ago

#46 - Warning after build mapping directory

Issue - State: open - Opened by xpliu16 10 months ago

#46 - Warning after build mapping directory

Issue - State: open - Opened by xpliu16 10 months ago

#45 - doi for this repo?

Issue - State: closed - Opened by cvanvelt 10 months ago - 1 comment

#45 - doi for this repo?

Issue - State: closed - Opened by cvanvelt 10 months ago - 1 comment

#44 - Update VERSIONS.md

Pull Request - State: closed - Opened by UCDNJJ about 1 year ago

#44 - Update VERSIONS.md

Pull Request - State: closed - Opened by UCDNJJ about 1 year ago

#43 - Update README.md

Pull Request - State: closed - Opened by UCDNJJ about 1 year ago

#43 - Update README.md

Pull Request - State: closed - Opened by UCDNJJ about 1 year ago

#42 - Update README.md

Pull Request - State: closed - Opened by UCDNJJ about 1 year ago

#42 - Update README.md

Pull Request - State: closed - Opened by UCDNJJ about 1 year ago

#41 - Update README.md

Pull Request - State: closed - Opened by UCDNJJ about 1 year ago

#41 - Update README.md

Pull Request - State: closed - Opened by UCDNJJ about 1 year ago

#40 - Update README.md

Pull Request - State: closed - Opened by UCDNJJ about 1 year ago

#40 - Update README.md

Pull Request - State: closed - Opened by UCDNJJ about 1 year ago

#39 - Inkar added hodge dataset

Pull Request - State: closed - Opened by ikapen-alleninst about 1 year ago

#39 - Inkar added hodge dataset

Pull Request - State: closed - Opened by ikapen-alleninst about 1 year ago

#38 - Update mapping.md

Pull Request - State: closed - Opened by ikapen-alleninst over 1 year ago

#38 - Update mapping.md

Pull Request - State: closed - Opened by ikapen-alleninst over 1 year ago

#36 - passing taxonomy via h5ad and clean-up individual taxonomy dependent functions

Pull Request - State: closed - Opened by leechangkyu over 1 year ago - 1 comment

#36 - passing taxonomy via h5ad and clean-up individual taxonomy dependent functions

Pull Request - State: closed - Opened by leechangkyu over 1 year ago - 1 comment

#35 - Pull the current main branch into my dev branch

Pull Request - State: closed - Opened by jeremymiller over 1 year ago

#35 - Pull the current main branch into my dev branch

Pull Request - State: closed - Opened by jeremymiller over 1 year ago

#33 - Human MTG mapping 'cannot open connection" error

Issue - State: open - Opened by ru57y34nn over 1 year ago - 7 comments

#33 - Human MTG mapping 'cannot open connection" error

Issue - State: open - Opened by ru57y34nn over 1 year ago - 7 comments

#32 - Merging main back to dev_jeremy

Pull Request - State: closed - Opened by jeremymiller over 1 year ago

#31 - rewrite the condition to check empty marker index file

Pull Request - State: closed - Opened by leechangkyu over 1 year ago

#31 - rewrite the condition to check empty marker index file

Pull Request - State: closed - Opened by leechangkyu over 1 year ago

#28 - Passing metadata with a single column breaks buildTaxonomy()

Issue - State: closed - Opened by UCDNJJ over 1 year ago - 1 comment

#28 - Passing metadata with a single column breaks buildTaxonomy()

Issue - State: closed - Opened by UCDNJJ over 1 year ago - 1 comment

#27 - Ck

Pull Request - State: closed - Opened by leechangkyu over 1 year ago - 1 comment

#27 - Ck

Pull Request - State: closed - Opened by leechangkyu over 1 year ago - 1 comment

#26 - Major update for patch-seq taxonomies

Pull Request - State: closed - Opened by jeremymiller over 1 year ago - 2 comments

#26 - Major update for patch-seq taxonomies

Pull Request - State: closed - Opened by jeremymiller over 1 year ago - 2 comments

#25 - Merging recent changes from main into dev_jeremy

Pull Request - State: closed - Opened by jeremymiller over 1 year ago

#25 - Merging recent changes from main into dev_jeremy

Pull Request - State: closed - Opened by jeremymiller over 1 year ago

#24 - taxonomyName input to loadTaxonomy not working as expected

Issue - State: closed - Opened by scseeman over 1 year ago - 2 comments

#24 - taxonomyName input to loadTaxonomy not working as expected

Issue - State: closed - Opened by scseeman over 1 year ago - 2 comments

#23 - Fix dend saving with buildPatchseqTaxonomy

Pull Request - State: closed - Opened by UCDNJJ over 1 year ago

#23 - Fix dend saving with buildPatchseqTaxonomy

Pull Request - State: closed - Opened by UCDNJJ over 1 year ago

#22 - writePatchseqMarkers having trouble with matrix rather than anno file inputs

Issue - State: closed - Opened by xpliu16 over 1 year ago - 1 comment

#22 - writePatchseqMarkers having trouble with matrix rather than anno file inputs

Issue - State: closed - Opened by xpliu16 over 1 year ago - 1 comment

#21 - fix load

Pull Request - State: closed - Opened by UCDNJJ over 1 year ago - 1 comment

#21 - fix load

Pull Request - State: closed - Opened by UCDNJJ over 1 year ago - 1 comment

#20 - taxonomy update and p value calculation from zscore

Pull Request - State: closed - Opened by leechangkyu over 1 year ago

#20 - taxonomy update and p value calculation from zscore

Pull Request - State: closed - Opened by leechangkyu over 1 year ago

#19 - merging new changes from main into dev_jeremy

Pull Request - State: closed - Opened by jeremymiller over 1 year ago

#19 - merging new changes from main into dev_jeremy

Pull Request - State: closed - Opened by jeremymiller over 1 year ago

#18 - Add missing files

Pull Request - State: closed - Opened by UCDNJJ over 1 year ago

#18 - Add missing files

Pull Request - State: closed - Opened by UCDNJJ over 1 year ago

#17 - overwriting dev_jeremy with main

Pull Request - State: closed - Opened by jeremymiller over 1 year ago

#17 - overwriting dev_jeremy with main

Pull Request - State: closed - Opened by jeremymiller over 1 year ago

#16 - Update build_patchseq_taxonomy.md

Pull Request - State: closed - Opened by UCDNJJ over 1 year ago

#16 - Update build_patchseq_taxonomy.md

Pull Request - State: closed - Opened by UCDNJJ over 1 year ago

#15 - Dev njj

Pull Request - State: closed - Opened by UCDNJJ over 1 year ago

#15 - Dev njj

Pull Request - State: closed - Opened by UCDNJJ over 1 year ago

#14 - Pull recent changes from main to dev_jeremy

Pull Request - State: closed - Opened by jeremymiller over 1 year ago

#13 - Patch-seq mapping tutorial clarification

Issue - State: open - Opened by xpliu16 almost 2 years ago - 2 comments

#12 - Update README.md

Pull Request - State: closed - Opened by UCDNJJ almost 2 years ago

#11 - Dev jeremy

Pull Request - State: closed - Opened by UCDNJJ almost 2 years ago

#10 - type check for counts and anno

Issue - State: open - Opened by UCDNJJ almost 2 years ago

#9 - standard deviation is zero Warning

Issue - State: closed - Opened by scseeman almost 2 years ago - 2 comments

#8 - py_to_r warning

Issue - State: open - Opened by scseeman almost 2 years ago

#7 - Pulling main to my dev branch for further updating

Pull Request - State: closed - Opened by jeremymiller almost 2 years ago

#6 - merge jeremy's changes and update CK mapping

Pull Request - State: closed - Opened by UCDNJJ almost 2 years ago

#5 - Patchseq output

Pull Request - State: closed - Opened by UCDNJJ almost 2 years ago

#4 - convert to anndata backend, organization

Pull Request - State: closed - Opened by UCDNJJ almost 2 years ago - 1 comment

#3 - Dev jeremy

Pull Request - State: closed - Opened by UCDNJJ about 2 years ago

#2 - Merge Nelson's updates back to dev branch

Pull Request - State: closed - Opened by jeremymiller about 2 years ago