alexandrovteam/pyimzML issues and pull requests

#44 - Bump version 1.5.4

Pull Request - State: closed - Opened by sergii-mamedov 9 months ago

#43 - Updated GitHub Actions workflow

Pull Request - State: closed - Opened by sergii-mamedov 9 months ago
Labels: enhancement

#42 - Fix a bug in parsing userParam value

Pull Request - State: closed - Opened by sergii-mamedov 9 months ago - 1 comment
Labels: bug

#41 - Replaced broken links in README file

Pull Request - State: closed - Opened by sergii-mamedov 9 months ago
Labels: bug

#40 - Expose ImzMLParser.spectrum_mode field

Pull Request - State: closed - Opened by sergii-mamedov 9 months ago
Labels: enhancement

#39 - Calculate dataset statistics

Pull Request - State: closed - Opened by sergii-mamedov 9 months ago

#38 - Fix a bug in parsing userParam value

Pull Request - State: closed - Opened by ZhengnanCheng 9 months ago - 1 comment

#37 - error while opening the imzml file made by firefly software from Prosolia Inc,

Issue - State: closed - Opened by Kumarsan201006 over 1 year ago - 1 comment
Labels: help wanted

#36 - Fixing a bug in the documentation

Pull Request - State: closed - Opened by sergii-mamedov about 2 years ago

#35 - one question about getionimage method

Issue - State: closed - Opened by inaciomdrs about 2 years ago - 9 comments
Labels: question

#34 - Change url for imzML 1.1.0 specification.

Pull Request - State: closed - Opened by sergii-mamedov over 2 years ago

#33 - Issue reading some imzML files

Issue - State: closed - Opened by aryre over 2 years ago - 3 comments

#32 - Add support for ion mobility binary data array

Pull Request - State: open - Opened by gtluu over 2 years ago

#31 - writer instead of w in ImzMLWriter example in Welcome to pyimzML documentation

Issue - State: closed - Opened by leorrose almost 3 years ago
Labels: bug

#30 - enable multiple MZ values in getionimage

Pull Request - State: closed - Opened by leorrose almost 3 years ago

#29 - getionimage performance issue for multiple mz values

Issue - State: open - Opened by leorrose almost 3 years ago - 1 comment

#28 - Fix two minor warnings

Pull Request - State: closed - Opened by LachlanStuart over 3 years ago

#27 - Expose ImzMLParser.polarity, fix ReadTheDocs

Pull Request - State: closed - Opened by LachlanStuart over 3 years ago

#26 - could not run ImzMLParser correctly

Issue - State: closed - Opened by hanghu1024 over 3 years ago - 3 comments

#25 - Fix missing pyimzml.ontology module in package

Pull Request - State: closed - Opened by LachlanStuart about 4 years ago - 1 comment

#24 - fix: setup.py, find all project packages

Pull Request - State: closed - Opened by intsco about 4 years ago - 1 comment
Labels: bug

#23 - Fixed missing ontology module

Pull Request - State: closed - Opened by paoloinglese about 4 years ago - 1 comment

#22 - No module named 'pyimzml.ontology'

Issue - State: closed - Opened by paoloinglese about 4 years ago

#21 - Add support for parsing all imzML metadata fields

Pull Request - State: closed - Opened by LachlanStuart over 4 years ago - 1 comment

#20 - could not install the library

Issue - State: closed - Opened by hzxxxxxx over 4 years ago - 3 comments

#19 - Issue when extracting m/z below experimentally acquired data...

Issue - State: open - Opened by DinosaurInSpace over 4 years ago
Labels: bug

#18 - wheezy template consistent with the provided examples

Pull Request - State: closed - Opened by paoloinglese over 5 years ago - 1 comment

#17 - MUST supply term of IMS:1000101 (external data)

Issue - State: closed - Opened by paoloinglese over 5 years ago - 3 comments

#16 - Add PortableSpectrumParser

Pull Request - State: closed - Opened by LachlanStuart over 5 years ago

#15 - Read spectrum mzs and intensities as numpy arrays

Pull Request - State: closed - Opened by intsco over 5 years ago

#14 - parse_lib extra argument to specify xml parsing lib, use lxml by default

Pull Request - State: closed - Opened by intsco over 5 years ago

#13 - Orbitrap data crash

Issue - State: closed - Opened by Kawue almost 6 years ago - 15 comments

#12 - Outdated report

Issue - State: closed - Opened by krishnakantsingh14 about 6 years ago - 1 comment
Labels: question, wontfix

#11 - added warning if z=0 coordinate present

Pull Request - State: closed - Opened by andy-d-palmer about 7 years ago

#10 - User param

Pull Request - State: closed - Opened by andy-d-palmer about 7 years ago

#9 - User param

Pull Request - State: closed - Opened by andy-d-palmer over 7 years ago

#8 - no "spectrum" entry in the referenceableParamGroupList

Issue - State: closed - Opened by andy-d-palmer over 7 years ago

#7 - high/low/basepeak etc. m/z should be in the spectrum element

Issue - State: closed - Opened by andy-d-palmer over 7 years ago

#6 - fix uuid byte order

Pull Request - State: closed - Opened by andy-d-palmer over 7 years ago

#5 - Bisect bug

Pull Request - State: closed - Opened by andy-d-palmer almost 8 years ago

#4 - always return (x,y,z) coordinates, and set z to 0 if not specific in …

Pull Request - State: closed - Opened by andy-d-palmer over 8 years ago - 2 comments

#3 - Cleaned up code; added comments

Pull Request - State: closed - Opened by jonathanimb over 8 years ago - 1 comment

#2 - Some bugfixes and improvements

Pull Request - State: closed - Opened by jonathanimb over 8 years ago - 2 comments

#1 - update requirements

Pull Request - State: closed - Opened by jonathanimb over 8 years ago - 1 comment

GitHub / alexandrovteam/pyimzML issues and pull requests