Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / alan-turing-institute/pixelflow issues and pull requests
#69 - Add .npy to the list of recognised mask file types
Issue -
State: open - Opened by IFenton 6 months ago
#68 - Updating branch
Pull Request -
State: closed - Opened by IFenton 6 months ago
#67 - Pixelflow JOSS paper
Issue -
State: open - Opened by evangeline-corcoran 6 months ago
Labels: coworking
#66 - Meeting with BAS team on Pixelflow/Scivision
Issue -
State: closed - Opened by evangeline-corcoran 7 months ago
- 1 comment
Labels: coworking
#65 - README fix and expanded mask types
Pull Request -
State: closed - Opened by jameswilsenach 8 months ago
#64 - Add citation file
Pull Request -
State: closed - Opened by IFenton 9 months ago
#63 - Create a citation file for pixelflow
Issue -
State: closed - Opened by IFenton 9 months ago
#62 - Ben vectors
Pull Request -
State: closed - Opened by lupinthief 9 months ago
#61 - Pass file path / directory instead of array
Issue -
State: open - Opened by lupinthief 9 months ago
- 1 comment
#60 - Pixelflow Sea Ice Use Case Demo
Issue -
State: open - Opened by evangeline-corcoran 9 months ago
Labels: enhancement
#59 - NLP/ chatGPT interface for zero-code interface
Issue -
State: open - Opened by lupinthief 9 months ago
#59 - NLP/ chatGPT interface for zero-code interface
Issue -
State: open - Opened by lupinthief 9 months ago
#58 - Provide shape descriptors as outputs
Issue -
State: open - Opened by evangeline-corcoran 10 months ago
- 1 comment
#58 - Provide shape descriptors as outputs
Issue -
State: open - Opened by evangeline-corcoran 10 months ago
- 1 comment
#57 - Retain spatial metadata
Issue -
State: open - Opened by evangeline-corcoran 10 months ago
Labels: enhancement
#57 - Retain spatial metadata
Issue -
State: open - Opened by evangeline-corcoran 10 months ago
Labels: enhancement
#56 - Implement a tomogram segmentation as part of pixelflow.
Issue -
State: open - Opened by crangelsmith 10 months ago
- 1 comment
#55 - Add warning if spacing is used with custom functions
Pull Request -
State: closed - Opened by IFenton 11 months ago
#55 - Add warning if spacing is used with custom functions
Pull Request -
State: closed - Opened by IFenton 11 months ago
#54 - Adding details to the README.md
Pull Request -
State: closed - Opened by IFenton 12 months ago
#53 - Adding testing to pixelflow
Pull Request -
State: closed - Opened by IFenton 12 months ago
- 1 comment
#52 - Apply btrack/pixel flow to marine data use case
Issue -
State: open - Opened by asthanameghna about 1 year ago
#51 - Add Readme for prospective enrichment students
Issue -
State: open - Opened by scotthosking about 1 year ago
#50 - Creating a summary function
Pull Request -
State: open - Opened by IFenton about 1 year ago
#49 - Add tests to pixelflow
Issue -
State: closed - Opened by IFenton about 1 year ago
#48 - Adding a lower limit to the scikit-image dependency
Pull Request -
State: closed - Opened by IFenton about 1 year ago
- 1 comment
#47 - Finalise pixelflow seed demos
Issue -
State: closed - Opened by evangeline-corcoran about 1 year ago
- 1 comment
#46 - Pin scikit-image dependency
Issue -
State: closed - Opened by IFenton about 1 year ago
#45 - Adding documentation for pixelflow
Pull Request -
State: closed - Opened by IFenton about 1 year ago
#44 - Coordinate data
Issue -
State: open - Opened by IFenton about 1 year ago
#43 - [DEFIANT] Merge latest model branch to main after PR
Issue -
State: closed - Opened by louisavz about 1 year ago
- 1 comment
#42 - Identify possible custom functions / datasets that could be used to test a summary function
Issue -
State: open - Opened by acocac about 1 year ago
#41 - Summary functions
Issue -
State: open - Opened by IFenton about 1 year ago
- 1 comment
#40 - Handle masks with no objects
Pull Request -
State: closed - Opened by IFenton about 1 year ago
#39 - Consider alternative output formats
Issue -
State: open - Opened by IFenton about 1 year ago
#38 - Write documentation
Issue -
State: closed - Opened by IFenton about 1 year ago
#37 - Error when running pixelflow for a mask with no labels
Issue -
State: closed - Opened by evangeline-corcoran about 1 year ago
- 7 comments
Labels: bug
#36 - Output intensity_image for each label
Issue -
State: closed - Opened by evangeline-corcoran about 1 year ago
- 5 comments
Labels: enhancement
#35 - Set scale for measurements in features table
Issue -
State: closed - Opened by evangeline-corcoran about 1 year ago
- 1 comment
Labels: enhancement
#34 - Adding functionality for spatial data
Pull Request -
State: closed - Opened by IFenton about 1 year ago
- 2 comments
#33 - Allow pixelflow to map pytorch (or other ML framework) models to image data
Issue -
State: open - Opened by quantumjot about 1 year ago
- 2 comments
Labels: enhancement
#32 - Adding a label option
Pull Request -
State: closed - Opened by IFenton over 1 year ago
#31 - Add label option
Issue -
State: closed - Opened by IFenton over 1 year ago
- 1 comment
#30 - Outputting the bounding boxes in the simulated image
Pull Request -
State: closed - Opened by IFenton over 1 year ago
- 1 comment
#29 - Incorporate geospatial metadata into pixelflow
Issue -
State: closed - Opened by IFenton over 1 year ago
- 1 comment
#28 - Fix Numba Deprecation Warning
Issue -
State: closed - Opened by IFenton over 1 year ago
- 1 comment
#27 - Have the test fixture return bounding boxes for the simulated images and masks
Issue -
State: closed - Opened by quantumjot over 1 year ago
- 1 comment
#26 - Adding additional input types
Pull Request -
State: closed - Opened by IFenton over 1 year ago
#25 - Bug fix efd
Pull Request -
State: closed - Opened by quantumjot over 1 year ago
#24 - EFD fails if mask is all True
Issue -
State: closed - Opened by quantumjot over 1 year ago
Labels: bug
#23 - Add pytest workflow
Pull Request -
State: closed - Opened by quantumjot over 1 year ago
#22 - Consider leveraging dask for larger nD datasets
Issue -
State: open - Opened by quantumjot over 1 year ago
- 1 comment
Labels: idea
#21 - Output segmented images
Pull Request -
State: closed - Opened by IFenton over 1 year ago
#20 - Add EFD custom function to pixelflow
Issue -
State: closed - Opened by quantumjot over 1 year ago
#19 - Add an example builtin shape analysis function
Pull Request -
State: closed - Opened by quantumjot over 1 year ago
- 1 comment
#18 - Add pre-commit and linting
Pull Request -
State: closed - Opened by quantumjot over 1 year ago
#17 - Adding functionality to handle ZYX datasets
Pull Request -
State: closed - Opened by IFenton over 1 year ago
#16 - Add CI workflow
Issue -
State: closed - Opened by quantumjot over 1 year ago
#15 - Add automated testing as part of CI
Issue -
State: closed - Opened by quantumjot over 1 year ago
#14 - How to create a custom function that is a secondary step on regionprops measurements?
Issue -
State: open - Opened by evangeline-corcoran over 1 year ago
- 3 comments
#13 - Output segmented images of each label using regionprops.intensity_image
Issue -
State: closed - Opened by evangeline-corcoran over 1 year ago
- 3 comments
Labels: enhancement
#12 - Add data checks to pixelflow
Issue -
State: open - Opened by IFenton over 1 year ago
#11 - Adding functionality to PixelflowResult to output a .csv file
Pull Request -
State: closed - Opened by IFenton over 1 year ago
#10 - Add missing dependencies to pyproject.toml and correct typo
Pull Request -
State: closed - Opened by IFenton over 1 year ago
#9 - Update README.md to add logo
Pull Request -
State: closed - Opened by quantumjot over 1 year ago
- 3 comments
Labels: documentation
#8 - Include regionprops_3D metrics in default features
Issue -
State: closed - Opened by evangeline-corcoran over 1 year ago
- 4 comments
Labels: enhancement
#7 - Allow easier output of 'features' table to csv?
Issue -
State: closed - Opened by evangeline-corcoran over 1 year ago
Labels: enhancement
#6 - Gather requirements from Scivision community
Issue -
State: open - Opened by ots22 over 1 year ago
- 9 comments
Labels: coworking
#5 - Library functions to include
Issue -
State: open - Opened by ots22 over 1 year ago
- 1 comment
Labels: coworking
#4 - Use pixelflow for two realistic use-cases
Issue -
State: open - Opened by ots22 over 1 year ago
- 3 comments
Labels: coworking
#3 - Image data supported by `pixelflow`
Issue -
State: open - Opened by ots22 over 1 year ago
- 2 comments
#2 - Types supported by `pixelflow` function
Issue -
State: open - Opened by ots22 over 1 year ago
- 2 comments
#1 - Initial commit
Pull Request -
State: closed - Opened by quantumjot over 1 year ago