aertslab/arboreto issues and pull requests

#37 - Inference without TF

Issue - State: open - Opened by binonteji about 1 year ago

#36 - msgpack.exceptions.ExtraData: unpack(b) received extra data.

Issue - State: open - Opened by GeneVector5 about 1 year ago

#35 - Different results with same random seed

Issue - State: open - Opened by divyanshusrivastava over 1 year ago - 1 comment

#34 - How to set the number of cores used by GRNboost2

Issue - State: open - Opened by divyanshusrivastava over 1 year ago - 1 comment

#33 - requirements.txt is missing from PyPI source tarball

Issue - State: open - Opened by boegel almost 2 years ago - 1 comment

#31 - Is arboreto applicable to bulk RNA-Seq

Issue - State: open - Opened by ZhangDengwei about 2 years ago

#30 - "No dispatch for <class 'dict'>" error

Issue - State: closed - Opened by scyrusm over 3 years ago - 1 comment

#29 - Why GENIE3/A outperforms GENIE3?

Issue - State: closed - Opened by mr-september over 3 years ago - 1 comment

#28 - Exception: too many values to unpack (expected 1)

Issue - State: open - Opened by xiatianjihao over 3 years ago

#27 - GRNBoost2 not available in R 4.0?

Issue - State: open - Opened by mr-september over 3 years ago

#26 - Update algo.py

Pull Request - State: closed - Opened by Ann-Holmes about 4 years ago

#25 - GRNboost2 importance vs GENIE3 weights

Issue - State: open - Opened by jfouyang over 4 years ago - 4 comments

#24 - Pandas version of as_matrix is deprecated

Issue - State: open - Opened by RRCinci-Lu over 4 years ago - 4 comments

#23 - network = grnboost2(.. takes too long. Something wrong?

Issue - State: open - Opened by franciscogrisanti over 4 years ago - 3 comments

#22 - load_tf_names command not working

Issue - State: open - Opened by Seandelao over 4 years ago - 1 comment

#21 - Ability to run Arboreto using a multiprocessing pool in place of Dask

Pull Request - State: closed - Opened by cflerin over 4 years ago - 1 comment

#20 - BUGFIX for sparse expression matrices

Pull Request - State: closed - Opened by redst4r almost 5 years ago - 1 comment

#19 - Algorithm complexity of GRNBoost2

Issue - State: open - Opened by dweemx almost 5 years ago

#18 - Fix index error when using from_delayed: see issue 17

Pull Request - State: open - Opened by opoirion about 5 years ago

#17 - from_delayed error when running grnboost2

Issue - State: open - Opened by scastlara about 5 years ago

#16 - Error when running GRNBoost2

Issue - State: open - Opened by rjb67 over 5 years ago

#15 - Garbage collection issue with GRNBoost2

Issue - State: open - Opened by cflerin over 5 years ago - 2 comments

#14 - grnboost2: No result, without error message

Issue - State: open - Opened by ebelingm over 5 years ago

#13 - GRNboost worker memory usage

Issue - State: closed - Opened by olgabaranov almost 6 years ago - 2 comments

#12 - Dask error in GRNBoost2

Issue - State: open - Opened by jamesrhowe almost 6 years ago

#11 - AttributeError

Issue - State: open - Opened by ghost almost 6 years ago - 2 comments

#10 - RuntimeError

Issue - State: open - Opened by DHelix about 6 years ago - 2 comments

#9 - bug in retry mechanism

Issue - State: open - Opened by tmoerman about 6 years ago
Labels: bug

#8 - error of 'distributed' when running GRNboost on server without internet connection

Issue - State: open - Opened by WeiCSong about 6 years ago - 1 comment
Labels: enhancement

#7 - grnboost error

Issue - State: open - Opened by wangjiawen2013 about 6 years ago - 6 comments

#6 - remove dependency on distributed

Issue - State: open - Opened by tmoerman about 6 years ago
Labels: enhancement

#5 - replace deprecated df.as_matrix() with df.values

Issue - State: open - Opened by tmoerman about 6 years ago
Labels: enhancement, deprecation

Ecosyste.ms: Issues

GitHub / aertslab/arboreto issues and pull requests