Ecosyste.ms: Issues

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GitHub / adibender/pammtools issues and pull requests

#248 - Issue 247

Pull Request - State: closed - Opened by adibender 9 days ago

#247 - Interval boundaries are not exactly equal

Issue - State: closed - Opened by Niklas191 about 2 months ago - 1 comment
Labels: bug, priority: high, data transformation

#246 - Question about as_ped()

Issue - State: open - Opened by meriops 4 months ago

#245 - `pamm` doesn't through warning when no offset variable present in data set.

Issue - State: open - Opened by adibender 6 months ago
Labels: priority: low, documentation

#244 - Multi state

Pull Request - State: open - Opened by adibender 12 months ago

#243 - update vignettes veteran data usage

Pull Request - State: closed - Opened by adibender 12 months ago

#242 - Issue 239

Pull Request - State: closed - Opened by adibender 12 months ago

#241 - Update documentation for Basic Modelling page

Issue - State: closed - Opened by johannespiller about 1 year ago - 2 comments
Labels: documentation

#240 - Fix documentation

Pull Request - State: closed - Opened by adibender about 1 year ago

#239 - Couple of deprecation from tidyverse when tests are run

Issue - State: closed - Opened by adibender about 1 year ago - 3 comments
Labels: bug

#238 - New Notes on CRAN

Issue - State: closed - Opened by adibender about 1 year ago
Labels: CRAN

#237 - Issue with as_ped(), with left-truncated data and custom cut points.

Issue - State: closed - Opened by AngelaCar about 1 year ago - 2 comments

#236 - Fix to compare with the interval column in model data

Pull Request - State: closed - Opened by gavinsimpson about 1 year ago - 1 comment

#235 - Wrong comparison of intervals in `warn_about_new_time_points.pamm`?

Issue - State: closed - Opened by gavinsimpson about 1 year ago - 3 comments

#234 - Update GitHub Actions

Pull Request - State: closed - Opened by jemus42 over 1 year ago

#233 - `add_cif` assumes `causes` with numeric labels?

Issue - State: open - Opened by fabian-s over 1 year ago

#232 - Cr

Pull Request - State: closed - Opened by adibender over 1 year ago

#231 - fix #230, update Rd files

Pull Request - State: closed - Opened by adibender almost 2 years ago - 1 comment

#230 - aes_string deprecated

Issue - State: closed - Opened by adibender almost 2 years ago
Labels: deprecation

#229 - Odds ratio or Hazard ratio for PAMMs?

Issue - State: closed - Opened by ningyile almost 2 years ago - 3 comments

#228 - as_ped errors when left-truncation + max_time present

Issue - State: open - Opened by adibender almost 2 years ago
Labels: bug

#226 - New issue on cran with predictSurvProb.pamm

Issue - State: closed - Opened by adibender almost 2 years ago
Labels: bug, CRAN

#225 - Change to new cran checks badge URL

Issue - State: closed - Opened by sckott about 2 years ago - 2 comments

#224 - add "recurrent events + tdc" scenario to as_ped()

Pull Request - State: open - Opened by lzumeta about 2 years ago

#223 - add penalize ll function

Pull Request - State: open - Opened by xu-lisa over 2 years ago - 2 comments

#222 - add penalize ll function

Pull Request - State: closed - Opened by xu-lisa over 2 years ago - 2 comments

#220 - `as_ped`: status variable can not be of type factor

Issue - State: open - Opened by jonas-schropp almost 3 years ago

#219 - combine argument in as_ped ignored when tdc's are present

Issue - State: open - Opened by jonas-schropp almost 3 years ago - 1 comment
Labels: bug, priority: high, data transformation

#218 - Add lag penalty basis for mgcv

Pull Request - State: open - Opened by adibender almost 3 years ago

#217 - Issue 154 stepribbon args

Pull Request - State: closed - Opened by fabian-s almost 3 years ago - 1 comment

#216 - `add_cif` only works with model fit by `pamm`

Issue - State: open - Opened by adibender almost 3 years ago
Labels: bug

#215 - evaluate brms compatibility

Issue - State: open - Opened by fabian-s almost 3 years ago
Labels: enhancement

#214 - problem x is empy

Issue - State: closed - Opened by marcoguerzoni about 3 years ago - 3 comments
Labels: bug

#212 - Fix int_info.pamm

Pull Request - State: closed - Opened by adibender about 3 years ago

#211 - more pkgdown fixes

Pull Request - State: closed - Opened by adibender about 3 years ago

#210 - Clean ups for pkgdown

Pull Request - State: closed - Opened by adibender about 3 years ago

#209 - Generalise tidyverse functions

Pull Request - State: closed - Opened by adibender about 3 years ago

#208 - predictSurvProb function doesn't work

Issue - State: closed - Opened by iMSQ about 3 years ago - 3 comments

#207 - Release pammtools 0.5.8

Issue - State: closed - Opened by adibender about 3 years ago - 1 comment
Labels: CRAN

#206 - Issue 202

Pull Request - State: closed - Opened by adibender about 3 years ago - 2 comments

#205 - Fix #203

Pull Request - State: closed - Opened by adibender about 3 years ago

#204 - Issue 200

Pull Request - State: closed - Opened by adibender about 3 years ago

#203 - add_surv_prob/add_hazard doesn't work without original data

Issue - State: closed - Opened by iMSQ about 3 years ago - 1 comment

#202 - problem when using with dplyr 1.0.8

Issue - State: closed - Opened by romainfrancois about 3 years ago

#201 - fix #200

Pull Request - State: closed - Opened by StaffanBetner over 3 years ago - 1 comment

#200 - method argument not inherited

Issue - State: closed - Opened by StaffanBetner over 3 years ago - 3 comments

#199 - Anaconda package

Issue - State: closed - Opened by RenzoTale88 over 3 years ago - 11 comments

#198 - Ctrb

Pull Request - State: closed - Opened by adibender over 3 years ago

#197 - Add GitHub actions for checks, pkgdown & codecov

Pull Request - State: closed - Opened by jemus42 over 3 years ago - 7 comments

#196 - Another fix to recurrent events vignette

Pull Request - State: closed - Opened by adibender over 3 years ago

#195 - Fix recurrent events vignette

Pull Request - State: closed - Opened by adibender over 3 years ago

#194 - Recurrent events vignette

Pull Request - State: closed - Opened by adibender almost 4 years ago

#193 - implement direction arg for stepribbon

Pull Request - State: closed - Opened by fabian-s almost 4 years ago - 1 comment

#192 - naming consitency r files

Pull Request - State: closed - Opened by adibender almost 4 years ago

#191 - Cra nfix

Pull Request - State: closed - Opened by adibender almost 4 years ago

#190 - Cran Issues (survival package data loading changed)

Issue - State: closed - Opened by adibender almost 4 years ago
Labels: bug, priority:urgent, CRAN

#189 - article homepage broken

Issue - State: closed - Opened by adibender almost 4 years ago
Labels: bug, priority:urgent, documentation

#188 - update gitignore

Pull Request - State: closed - Opened by adibender almost 4 years ago

#187 - Multi state

Pull Request - State: closed - Opened by adibender almost 4 years ago

#186 - Fixes #185

Pull Request - State: closed - Opened by adibender almost 4 years ago

#185 - Bug in `as_ped_recurrent`

Issue - State: closed - Opened by adibender about 4 years ago
Labels: bug, priority:urgent

#184 - Data trafo for concurrent/cumulative effects doesn't work for start-stop data

Issue - State: closed - Opened by adibender about 4 years ago - 1 comment
Labels: bug, priority: high

#183 - Fix frailty vignette

Issue - State: closed - Opened by adibender about 4 years ago
Labels: bug, priority: high, documentation

#182 - Issue 178

Pull Request - State: closed - Opened by adibender about 4 years ago

#181 - Random effects plot not equivalent to "native" mgcv plot

Issue - State: closed - Opened by adibender about 4 years ago
Labels: bug

#180 - Recurrent events

Pull Request - State: closed - Opened by adibender about 4 years ago
Labels: addition, data transformation

#179 - Issue 165

Pull Request - State: closed - Opened by adibender about 4 years ago

#178 - Submit to CRAN

Issue - State: closed - Opened by adibender about 4 years ago
Labels: CRAN

#177 - Install eha for left-truncation vignette

Pull Request - State: closed - Opened by adibender about 4 years ago

#176 - Try to fix vignette compilation

Pull Request - State: closed - Opened by adibender about 4 years ago

#175 - Update yaml

Pull Request - State: closed - Opened by adibender about 4 years ago

#174 - Left truncation

Pull Request - State: closed - Opened by adibender about 4 years ago
Labels: enhancement, addition, priority: high

#173 - Implements data trafo for left truncation (+ preliminary support for recurrent events)

Pull Request - State: closed - Opened by adibender about 4 years ago
Labels: enhancement, addition, priority: high

#172 - install package after sucessfull check

Pull Request - State: closed - Opened by adibender over 4 years ago

#171 - test

Pull Request - State: closed - Opened by adibender over 4 years ago

#170 - fix vignette index entry

Pull Request - State: closed - Opened by adibender over 4 years ago

#169 - vignettes/articles not showing anymore after deployment

Issue - State: closed - Opened by adibender over 4 years ago - 2 comments

#168 - try to fix vignettes

Pull Request - State: closed - Opened by adibender over 4 years ago

#167 - Issue 70

Pull Request - State: closed - Opened by adibender over 4 years ago

#166 - Issue 70

Pull Request - State: closed - Opened by adibender over 4 years ago

#165 - improve coverage

Issue - State: closed - Opened by adibender over 4 years ago
Labels: enhancement, priority: low

#164 - page deployment broken (articles 404)

Issue - State: closed - Opened by adibender over 4 years ago - 1 comment
Labels: bug, priority:urgent

#163 - Add CR vignette

Pull Request - State: closed - Opened by adibender over 4 years ago
Labels: documentation

#162 - Generalize add functions

Pull Request - State: closed - Opened by adibender over 4 years ago
Labels: enhancement

#159 - Cr vignette

Pull Request - State: closed - Opened by adibender over 4 years ago

#154 - direction argument to geom_stepribbon

Issue - State: closed - Opened by eds-slim over 4 years ago - 8 comments
Labels: enhancement

#152 - data trafo for left-truncation

Issue - State: closed - Opened by adibender over 4 years ago - 4 comments
Labels: feature, priority: low

#151 - data trafo for interval censored data

Issue - State: closed - Opened by adibender over 4 years ago - 1 comment
Labels: feature, priority: low

#139 - S3 predict function for pamm objects

Issue - State: open - Opened by adibender almost 5 years ago - 2 comments
Labels: feature, priority: low

#131 - Issue 129

Pull Request - State: closed - Opened by adibender about 5 years ago - 4 comments
Labels: enhancement, addition, feature

#130 - adds `pamm` wrapper around `gam`

Pull Request - State: closed - Opened by adibender about 5 years ago - 1 comment
Labels: addition, feature

#129 - Add support for model evaluation measures (i.e. Brier Score, C-Index)

Issue - State: closed - Opened by adibender about 5 years ago - 1 comment
Labels: addition, feature

#128 - add wrapper around gam call

Issue - State: closed - Opened by adibender about 5 years ago
Labels: enhancement, addition

#116 - CI types: simultaneous confidence bands

Issue - State: open - Opened by fabian-s over 5 years ago - 3 comments
Labels: feature, priority: low

#115 - CI types: documentation, evaluation

Issue - State: closed - Opened by fabian-s over 5 years ago - 2 comments
Labels: discussion, documentation

#111 - Updates to specification of (log-) hazards

Pull Request - State: closed - Opened by adibender over 5 years ago - 1 comment
Labels: enhancement

#107 - Competing Risks: Wrap glms/gams?

Issue - State: closed - Opened by pkopper over 5 years ago - 7 comments

#105 - [WIP] Competing risks

Pull Request - State: closed - Opened by adibender almost 6 years ago - 1 comment