Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / achtman-lab/GrapeTree issues and pull requests
#110 - SNPs alignment as input
Issue -
State: open - Opened by mlarjim 3 months ago
- 2 comments
#109 - Unable to visualise tree in Microreact.
Issue -
State: open - Opened by khalil-abudahab 4 months ago
#108 - missing packages in requirements.txt
Issue -
State: open - Opened by tsladecek 5 months ago
#107 - MemoryError
Issue -
State: open - Opened by eam12 over 1 year ago
#106 - Installation error using conda?
Issue -
State: closed - Opened by sekhwal almost 2 years ago
#105 - grapetree conda installation error?
Issue -
State: closed - Opened by sekhwal almost 2 years ago
#104 - Cannot Connect to the backend server
Issue -
State: open - Opened by davidmaimoun about 2 years ago
- 1 comment
#103 - How to make phylogenetic using binary data
Issue -
State: open - Opened by sekhwal about 2 years ago
- 1 comment
#102 - Different behavior between "hide", "shorten" and "collapse" branches
Issue -
State: open - Opened by vmixao about 2 years ago
#101 - Possible to export network object from GrapeTree-Standalone?
Issue -
State: open - Opened by matbeale about 2 years ago
#100 - NumbaPendingDeprecationWarning type 'reflected list' found for argument 'a' of function 'contemporary'
Issue -
State: open - Opened by peterjc over 2 years ago
- 1 comment
#99 - Estimate breaks with ninja and distance methods
Issue -
State: open - Opened by peterjc over 2 years ago
#98 - fix: collapse and uncollapse nodes
Pull Request -
State: open - Opened by IvanPenyaHuguet almost 3 years ago
#97 - Stuck at the "Loading Data" wheel
Issue -
State: open - Opened by kringwa2 almost 3 years ago
#96 - Collapse selected nodes doesn't do anything?
Issue -
State: open - Opened by LauraVP1994 over 3 years ago
- 1 comment
#95 - GrapeTree links via GitHub are not working
Issue -
State: closed - Opened by Fiona-McDougall over 3 years ago
- 2 comments
#94 - Programmatically create grapetree visualizations
Issue -
State: open - Opened by crarlus almost 4 years ago
- 4 comments
#93 - Problems installing latest grapetree
Issue -
State: open - Opened by crarlus almost 4 years ago
#92 - Uploading metadata
Issue -
State: open - Opened by peflanag almost 4 years ago
- 2 comments
#91 - merge
Pull Request -
State: closed - Opened by zheminzhou over 4 years ago
#90 - mege
Pull Request -
State: closed - Opened by zheminzhou over 4 years ago
#89 - GrapeTree Clustering
Issue -
State: open - Opened by jimmyliu1326 over 4 years ago
#88 - GrapeTree is still available???
Issue -
State: closed - Opened by mabouelk over 4 years ago
- 1 comment
#87 - Understanding the grapetree distance computation
Issue -
State: closed - Opened by crarlus over 4 years ago
- 1 comment
#86 - Installation with pip
Issue -
State: closed - Opened by emmadoughty over 4 years ago
- 2 comments
#85 - Fix relative import
Pull Request -
State: closed - Opened by PertuyF almost 5 years ago
- 1 comment
#84 - pip install
Issue -
State: closed - Opened by bifidoman almost 5 years ago
- 2 comments
#83 - app for mac
Issue -
State: closed - Opened by bifidoman almost 5 years ago
- 1 comment
#82 - Strange behaviour with MSTreeV2
Issue -
State: open - Opened by LordRust almost 5 years ago
#81 - Vieweing all labels of identical isolates
Issue -
State: open - Opened by LordRust almost 5 years ago
- 1 comment
#80 - grapetree and Python 3.6
Issue -
State: closed - Opened by crarlus over 5 years ago
- 5 comments
#79 - Scale bar (Feature Request)
Issue -
State: closed - Opened by chrisgulvik over 5 years ago
- 1 comment
#78 - ImportError: No module named ...
Pull Request -
State: closed - Opened by bryan-brancotte over 5 years ago
- 2 comments
#77 - Add rapidnj mac binary
Pull Request -
State: closed - Opened by nluhmann about 6 years ago
#76 - Standalone: Adding new metadata via file upload duplicates all entries
Issue -
State: closed - Opened by nluhmann about 6 years ago
- 1 comment
#75 - Python35 support
Pull Request -
State: closed - Opened by happykhan over 6 years ago
- 1 comment
#74 - Fix importing metadata on local website.
Pull Request -
State: closed - Opened by kjolley over 6 years ago
#73 - The Help text for EnteroBase (?) goes outside of the box.
Issue -
State: closed - Opened by happykhan over 6 years ago
#72 - merge
Pull Request -
State: closed - Opened by zheminzhou over 6 years ago
#71 - merge
Pull Request -
State: closed - Opened by zheminzhou over 6 years ago
#70 - merge
Pull Request -
State: closed - Opened by zheminzhou over 6 years ago
#69 - EnteroBase does not save number of groups
Issue -
State: closed - Opened by happykhan over 6 years ago
- 1 comment
#68 - Group number setting doesnt show other.
Issue -
State: closed - Opened by happykhan over 6 years ago
#67 - recompiled edmonds-osx
Pull Request -
State: closed - Opened by nluhmann over 6 years ago
#66 - Crashing on larger datasets on Windows 10
Issue -
State: closed - Opened by smutschall over 6 years ago
- 3 comments
#65 - Warning for duplicate taxons.
Issue -
State: open - Opened by happykhan almost 7 years ago
#63 - simulation scripts
Pull Request -
State: closed - Opened by nluhmann almost 7 years ago
#62 - GUI changing
Issue -
State: closed - Opened by zheminzhou about 7 years ago
- 1 comment
#61 - wish list --- Mark
Issue -
State: closed - Opened by zheminzhou about 7 years ago
- 1 comment
#60 - Help for "branches longer than" not shown
Issue -
State: closed - Opened by happykhan about 7 years ago
#59 - Enterobase buttons
Issue -
State: closed - Opened by nluhmann about 7 years ago
#58 - general menu adjustments
Issue -
State: closed - Opened by nluhmann about 7 years ago
#57 - metadata table headers not aligned to rest of the columns
Issue -
State: closed - Opened by nluhmann about 7 years ago
Labels: bug
#56 - branch scaling issue
Issue -
State: closed - Opened by nluhmann about 7 years ago
#55 - "Load selected" when only hypothetical nodes are selected
Issue -
State: closed - Opened by nluhmann about 7 years ago
Labels: bug
#54 - figure legend overlaps menu
Issue -
State: closed - Opened by nluhmann about 7 years ago
#53 - context menu selections run out of window
Issue -
State: closed - Opened by nluhmann about 7 years ago
#52 - Others in legend does have a number.
Issue -
State: closed - Opened by happykhan about 7 years ago
- 1 comment
#51 - Enterobase mst
Issue -
State: closed - Opened by happykhan about 7 years ago
#50 - Remove load metadata
Issue -
State: closed - Opened by happykhan about 7 years ago
#49 - AgonA Tutorial example.
Issue -
State: closed - Opened by happykhan about 7 years ago
- 1 comment
#48 - Help
Issue -
State: closed - Opened by happykhan about 7 years ago
#47 - Issues with MacOSX binaries
Issue -
State: closed - Opened by happykhan about 7 years ago
#46 - Legend issues
Issue -
State: closed - Opened by happykhan about 7 years ago
- 1 comment
#45 - Hypothetical nodes shown on legend.
Issue -
State: closed - Opened by happykhan about 7 years ago
#44 - Long columns names break drop downs.
Issue -
State: closed - Opened by happykhan about 7 years ago
#42 - MSTREE.py does not handle special character for Newick output
Issue -
State: closed - Opened by happykhan about 7 years ago
#41 - Load Tree/Profile doesnt return an error message
Issue -
State: closed - Opened by happykhan about 7 years ago
#40 - Memory error on edmonds for Windows machines.
Issue -
State: closed - Opened by happykhan about 7 years ago
#39 - right click menu
Issue -
State: closed - Opened by zheminzhou about 7 years ago
- 1 comment
#38 - Go back to the default layout
Issue -
State: closed - Opened by zheminzhou about 7 years ago
#37 - detailed control of all dragbars
Issue -
State: closed - Opened by zheminzhou about 7 years ago
#36 - show/disable hypothetical nodes
Issue -
State: closed - Opened by zheminzhou about 7 years ago
#35 - A control pane for the figure legend
Issue -
State: closed - Opened by zheminzhou about 7 years ago
#34 - Add borders around the key colors
Issue -
State: closed - Opened by zheminzhou about 7 years ago
#33 - Inform the users that the saved files will be in the download folder.
Issue -
State: closed - Opened by zheminzhou about 7 years ago
#32 - All links in the GUI are opened in a new window
Issue -
State: closed - Opened by zheminzhou about 7 years ago
#31 - Warning when the users try to leave the page.
Issue -
State: closed - Opened by zheminzhou about 7 years ago
#30 - update examples. Put the ST313 trees and the MLST trees in and discard all others
Issue -
State: closed - Opened by zheminzhou about 7 years ago
#29 - Centre is spelt CENTRE not center
Issue -
State: closed - Opened by happykhan over 7 years ago
#28 - "ID" requirement for metadata is too specific
Issue -
State: closed - Opened by happykhan over 7 years ago
#27 - Parameters working with profiles
Issue -
State: closed - Opened by happykhan over 7 years ago
#26 - Selection layout option
Issue -
State: closed - Opened by happykhan over 7 years ago
#25 - Method Dropdown still shown
Issue -
State: closed - Opened by happykhan over 7 years ago
#24 - Disabling buttons
Issue -
State: closed - Opened by happykhan over 7 years ago
#23 - Limit categories coloured
Issue -
State: closed - Opened by happykhan over 7 years ago
#22 - Alter. collapsing branch
Issue -
State: closed - Opened by happykhan over 7 years ago
#21 - Button to bring back splash screen
Issue -
State: closed - Opened by happykhan over 7 years ago
#20 - file name in the top left shown in italics
Issue -
State: closed - Opened by happykhan over 7 years ago
#19 - Ability to Save Bitmap (PNG file)
Issue -
State: closed - Opened by happykhan over 7 years ago
#18 - Better exception handling for BASA/ maketree step:
Issue -
State: closed - Opened by happykhan over 7 years ago
#17 - Rename MSTree_holder.html to index.html
Pull Request -
State: closed - Opened by zheminzhou over 7 years ago
#16 - "Load newick" button doesnt do anything
Issue -
State: closed - Opened by happykhan over 7 years ago
#14 - Algorithm
Pull Request -
State: closed - Opened by happykhan over 7 years ago
#13 - Algorithm
Pull Request -
State: closed - Opened by happykhan over 7 years ago
#12 - A bunch of updates for handling parameters
Pull Request -
State: closed - Opened by happykhan over 7 years ago
#11 - Low priority: Support for reading Excel spreadsheet
Issue -
State: closed - Opened by happykhan over 7 years ago
Labels: enhancement
#9 - Pulling Server changes into algo.
Pull Request -
State: closed - Opened by happykhan over 7 years ago
#8 - Merge pull request #6 from martinSergeant/master
Pull Request -
State: closed - Opened by happykhan over 7 years ago
#7 - Merge pull request #3 from martinSergeant/master
Pull Request -
State: closed - Opened by happykhan over 7 years ago