Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / abTEM/abTEM issues and pull requests
#170 - Vacuum scan
Issue -
State: open - Opened by aowenli 20 days ago
- 2 comments
#169 - Camera length and angular value of the camera pixels
Issue -
State: open - Opened by Tama-1997 20 days ago
- 1 comment
#168 - Focal series with incoherent waves
Issue -
State: open - Opened by alouiset 22 days ago
#167 - Clarify output in pretty_print_transform
Issue -
State: closed - Opened by Sarah-A-Stock 27 days ago
- 4 comments
#166 - Reducing memory use for massive specimen models using PRISM
Issue -
State: open - Opened by SoverHHH about 1 month ago
- 9 comments
#165 - An issue about the argument of resample='uniform' in abtem.PixelatedDetector()
Issue -
State: open - Opened by PhysXu about 1 month ago
- 4 comments
#164 - Compatibility Issues with NumPy 2.0.1 in abtem 1.0.5 for STEM Quickstart
Issue -
State: closed - Opened by Nick-tyh2110 about 1 month ago
- 4 comments
#163 - An issue after install Cupy
Issue -
State: open - Opened by PhysXu about 1 month ago
- 9 comments
#162 - interpolate_line fails on data loaded from zarr if width parameter is set
Issue -
State: open - Opened by edwinsupple about 2 months ago
- 3 comments
#161 - Getting one exit wave of the probe at the center of the potential after applying HAADF detectors
Issue -
State: closed - Opened by Tomocrystal 2 months ago
- 3 comments
#160 - Could I save/export the simulated 4d-stem dataset as a numpy array?
Issue -
State: closed - Opened by PhysXu 3 months ago
- 10 comments
#159 - get the x-axis from the interpolate_line
Issue -
State: closed - Opened by zwcweichen 3 months ago
- 2 comments
#158 - Creating synthetic atom with weighted average of atomic potential
Issue -
State: open - Opened by GabrielVazquezLizardi 3 months ago
- 3 comments
#157 - Query re: calculating cross-sections
Issue -
State: closed - Opened by nravigroup 4 months ago
- 6 comments
#156 - Computing potential from external charge density data
Issue -
State: closed - Opened by leorubiola 4 months ago
- 4 comments
#155 - Using ionic peng parametrization
Issue -
State: closed - Opened by MichaelO1993 4 months ago
- 2 comments
#154 - Lazy exit wave stack != computed exit wave stack
Issue -
State: closed - Opened by alouiset 5 months ago
- 8 comments
#153 - Specify GPU device index
Issue -
State: closed - Opened by shz224 5 months ago
- 3 comments
#152 - Prism phase aberration part, axis metadata error
Issue -
State: closed - Opened by qiuzanlin 5 months ago
- 3 comments
#151 - beam tilt not taking effect when using a simple tilt value
Issue -
State: closed - Opened by wdwzyyg 5 months ago
- 2 comments
#150 - Charge density potential from another DFT code?
Issue -
State: open - Opened by floatingCatty 6 months ago
- 8 comments
#149 - PRISM algorithm (RuntimeError: Integration limit exceeded.)
Issue -
State: closed - Opened by nmd5719 6 months ago
- 3 comments
#148 - `sampling` docstring clarification
Issue -
State: closed - Opened by matbryan52 6 months ago
- 5 comments
#147 - Quickstart notebooks throwing error with 1.0.4 abTEM version
Issue -
State: closed - Opened by utkarshp1161 7 months ago
- 2 comments
#146 - Quickstart example not working (defocus='scherzer')
Issue -
State: closed - Opened by annielucarv 7 months ago
- 2 comments
#145 - Size of the CBED disk
Issue -
State: closed - Opened by Chuqiao2333 7 months ago
- 9 comments
#144 - Amorphous simulation with FrozenPhonon to do RDF analysis
Issue -
State: closed - Opened by Loewe313 7 months ago
- 4 comments
#143 - Unexpected Periodicity during Potential Building
Issue -
State: open - Opened by Shephardnihy 7 months ago
- 3 comments
#142 - Failing to `pip install abtem` on macOS
Issue -
State: closed - Opened by TomaSusi 8 months ago
#141 - PRISM Quickstart example does not work (RuntimeError: Integration limit exceeded.)
Issue -
State: closed - Opened by SJiang09 8 months ago
- 4 comments
#140 - Inconsistency of the Probe generated by new version and old version
Issue -
State: closed - Opened by yiranlus 8 months ago
- 3 comments
#139 - How can I use abtem to read an experimental 4DSTEM data?
Issue -
State: closed - Opened by PhysXu 8 months ago
- 2 comments
#138 - When plotting profiles, the legend repeats the first entry
Issue -
State: closed - Opened by MoniaNielsen 8 months ago
- 11 comments
#137 - Unusual pattern when scanning a vacuum space
Issue -
State: closed - Opened by cablecrossover 9 months ago
- 3 comments
#136 - Simultaneously using frozen phonons and defocus series with PRISM algorithm
Issue -
State: closed - Opened by edwinsupple 9 months ago
- 2 comments
#135 - error when using the abtem.reconstruct.MultislicePtychographicOperator
Issue -
State: closed - Opened by Hansen311 10 months ago
- 2 comments
#134 - Scan error while using CustomScan
Issue -
State: closed - Opened by vbo12345 10 months ago
- 2 comments
#132 - Incompatability with some ASE built-in structures
Issue -
State: closed - Opened by realitychemist 10 months ago
- 2 comments
#131 - Quickstart example does not work (defocus='scherzer')
Issue -
State: closed - Opened by schiotz 10 months ago
- 1 comment
#130 - `SegmentedDetector.show()` throws errors if called with default arguments
Issue -
State: closed - Opened by realitychemist 10 months ago
- 3 comments
#129 - The example "run_STEM_MoS2.py" doesn't work.
Issue -
State: open - Opened by Lynyanyu 11 months ago
- 1 comment
#128 - difference between Images.show and plt.imshow the simulation result
Issue -
State: closed - Opened by ikkihou 11 months ago
- 1 comment
#127 - Bug in pyfftw.pyfftw.FFTW.__cinit__ when using high performance computer
Issue -
State: closed - Opened by Monarch-Azir 11 months ago
- 5 comments
#126 - Merging Hyperspy bug-fix
Issue -
State: closed - Opened by CSSFrancis 11 months ago
- 3 comments
#125 - Thickness series
Issue -
State: closed - Opened by elisathr 11 months ago
- 2 comments
#124 - Issue with normalized intensity of HAADF images
Issue -
State: closed - Opened by kalanadasunpriya 11 months ago
- 9 comments
#123 - CTF 1D profile
Issue -
State: closed - Opened by EthanJUCB 11 months ago
- 2 comments
#122 - Calculate frozen phonons with Debye-Waller factor
Issue -
State: open - Opened by shz224 11 months ago
- 11 comments
#121 - pixel number in diffraction space
Issue -
State: closed - Opened by Schuyler-Zixiao-Shi 12 months ago
- 2 comments
#120 - Import issue on a non-GPU device with cupy installed
Issue -
State: closed - Opened by M0hsend 12 months ago
- 8 comments
#119 - to_tif missing tifffile package
Issue -
State: closed - Opened by Schuyler-Zixiao-Shi 12 months ago
- 2 comments
#118 - A question about indices
Issue -
State: closed - Opened by LoeweWang 12 months ago
- 1 comment
#117 - Bugs in the simulation of frozen phonons (abTEM 1.0.0beta35)
Issue -
State: closed - Opened by startingbird about 1 year ago
- 1 comment
#116 - Issues related to lower frequency amplitude points in diffraction patterns.
Issue -
State: closed - Opened by startingbird about 1 year ago
- 7 comments
#115 - How to eliminate the hole in the center of the image generated by diffraction patterns.
Issue -
State: closed - Opened by startingbird about 1 year ago
- 4 comments
#114 - Zernike phase plate
Pull Request -
State: closed - Opened by smribet about 1 year ago
- 4 comments
#113 - dependencies version issues
Issue -
State: closed - Opened by smribet about 1 year ago
- 3 comments
#112 - orthogonalize_cell in example folder
Issue -
State: closed - Opened by Schuyler-Zixiao-Shi about 1 year ago
- 2 comments
#111 - Handling arbitrary crystal tilts with abTem's orthogonalize function
Issue -
State: open - Opened by tiarnan-doherty about 1 year ago
- 2 comments
#110 - Attempt 2: TypeError fix [iam.py]
Pull Request -
State: closed - Opened by EugenKozyrau about 1 year ago
- 1 comment
#109 - seeds=None - TypeError fix [iam.py]
Pull Request -
State: closed - Opened by EugenKozyrau about 1 year ago
- 2 comments
#108 - [abtem-dask] Type error: .multislice() using crystal_potential with seeds=None
Issue -
State: closed - Opened by EugenKozyrau about 1 year ago
- 7 comments
#107 - Gaussian CBED Discs
Issue -
State: closed - Opened by EoinScope about 1 year ago
- 6 comments
#106 - fixing binder
Pull Request -
State: closed - Opened by alex-rakowski over 1 year ago
- 1 comment
#105 - Issue with the HAADF detector
Issue -
State: closed - Opened by kalanadasunpriya over 1 year ago
- 3 comments
#104 - Issue with the HAADF detector
Issue -
State: closed - Opened by kalanadasunpriya over 1 year ago
#103 - Fix numpy error
Pull Request -
State: closed - Opened by CSSFrancis over 1 year ago
- 2 comments
#102 - incompatible with numpy 1.24.2
Issue -
State: closed - Opened by ikkihou over 1 year ago
- 2 comments
#101 - Adding scan distortion in HAADF simulation process
Issue -
State: closed - Opened by CGao-STEM over 1 year ago
- 1 comment
#100 - error when using log_scale in diffract patterns
Issue -
State: closed - Opened by Weslie0803 over 1 year ago
- 1 comment
#99 - HAADF atomic dots are quite small
Issue -
State: closed - Opened by lipai-ustc over 1 year ago
- 3 comments
#98 - Inconsistency between ctf.show() and exit_wave.apply_ctf(ctf)?
Issue -
State: closed - Opened by alouiset over 1 year ago
- 6 comments
#97 - Flipping the CTF phase
Pull Request -
State: closed - Opened by TomaSusi over 1 year ago
- 2 comments
#96 - Beam tilt of SMatrix
Issue -
State: closed - Opened by yy-ssang over 1 year ago
- 1 comment
#95 - PIE Notebooks cleanup and probe-normalization bug fix
Pull Request -
State: closed - Opened by gvarnavi almost 2 years ago
- 1 comment
#94 - TDS in CBED simulation
Issue -
State: closed - Opened by Shephardnihy almost 2 years ago
- 3 comments
#93 - Clean up of the notebook update_quick_hrtem_and_saed.ipynb
Pull Request -
State: closed - Opened by schiotz almost 2 years ago
- 1 comment
#92 - Ptychographic Iterative Engine Generalizations
Pull Request -
State: closed - Opened by gvarnavi about 2 years ago
- 7 comments
#91 - Is it possible to apply Debye-Waller factor to describe thermal motion
Issue -
State: closed - Opened by xiongh15 about 2 years ago
- 3 comments
#90 - Adding noise to 4D-STEM diffraciton pattern
Issue -
State: closed - Opened by xiongh15 about 2 years ago
- 2 comments
#89 - Type mismatch error in resampled pixelated detector with SMatrix interpolation on GPU
Issue -
State: closed - Opened by gvarnavi about 2 years ago
- 2 comments
#88 - Request - allow full size output for pixelated detector
Issue -
State: closed - Opened by cophus about 2 years ago
- 3 comments
#87 - probe modification
Pull Request -
State: closed - Opened by smribet about 2 years ago
- 1 comment
#86 - beam modification
Issue -
State: closed - Opened by smribet about 2 years ago
- 21 comments
#85 - epie issue
Issue -
State: closed - Opened by Hansen311 about 2 years ago
- 4 comments
#84 - PartitionedSMatrix has no ._generate_probes() method
Issue -
State: closed - Opened by hisigns over 2 years ago
- 2 comments
#83 - phase flipping and phase shift in CTF
Issue -
State: closed - Opened by EthanJUCB over 2 years ago
- 16 comments
#82 - CFT plot - X axis in reciprocal space
Issue -
State: closed - Opened by JulioAzcarate over 2 years ago
- 3 comments
#81 - Issue on Ag [111] HRTEM image simulation
Issue -
State: closed - Opened by JulioAzcarate over 2 years ago
- 3 comments
#80 - plot probe phase and amplitude
Issue -
State: closed - Opened by smribet over 2 years ago
- 5 comments
#79 - Fixed extent in 3D wavefunction example
Pull Request -
State: closed - Opened by Quantumstud over 2 years ago
- 1 comment
#78 - Issues on abtem-dask
Issue -
State: closed - Opened by wuyao3561 over 2 years ago
- 5 comments
#77 - issue on image simulation.
Issue -
State: closed - Opened by yc9690 over 2 years ago
- 9 comments
#76 - Abtem dask
Pull Request -
State: closed - Opened by jacobjma over 2 years ago
#75 - Improve `to_hyperspy` methods
Pull Request -
State: closed - Opened by ericpre over 2 years ago
- 1 comment
#74 - `stack_measurements` fails when `calibrations` are a list
Issue -
State: closed - Opened by sezelt over 2 years ago
- 1 comment
#73 - Type mismatch in resampled pixelated detector on GPU
Issue -
State: closed - Opened by sezelt over 2 years ago
- 2 comments
#72 - Issue with GPU
Issue -
State: closed - Opened by wuyao3561 over 2 years ago
- 8 comments
#71 - Fix bug with streaming PRISM calculation
Pull Request -
State: closed - Opened by ericpre over 2 years ago
- 1 comment
#70 - Fix using correct python version in github CI
Pull Request -
State: closed - Opened by ericpre over 2 years ago
- 1 comment