Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / Zhong-Lab-UCSD/Genomic-Interactive-Visualization-Engine issues and pull requests

#100 - Error "Invalid RefObject was given: hg38" while following Tutorial 3

Issue - State: open - Opened by rdbcasillas almost 5 years ago - 5 comments

#99 - Visualizing my own Capture C data

Issue - State: closed - Opened by Odedoron almost 5 years ago - 3 comments

#98 - Bump acorn from 5.7.3 to 5.7.4

Pull Request - State: open - Opened by dependabot[bot] almost 5 years ago
Labels: dependencies

#97 - Create CODE_OF_CONDUCT.md

Pull Request - State: closed - Opened by Irenexzwen about 5 years ago

#96 - Update interaction_track.php

Pull Request - State: closed - Opened by caoxiaoyi03 about 5 years ago

#95 - Bump lodash from 4.17.11 to 4.17.15

Pull Request - State: closed - Opened by dependabot[bot] about 5 years ago
Labels: dependencies

#94 - Bump axios from 0.18.0 to 0.18.1

Pull Request - State: closed - Opened by dependabot[bot] about 5 years ago
Labels: dependencies

#93 - Fixed some error in custom track handling

Pull Request - State: closed - Opened by caoxiaoyi03 about 5 years ago

#92 - Bump eslint-utils from 1.3.1 to 1.4.3

Pull Request - State: closed - Opened by dependabot[bot] over 5 years ago
Labels: dependencies

#91 - Custom tracks support

Pull Request - State: closed - Opened by caoxiaoyi03 over 5 years ago

#90 - Customization of chart elements

Issue - State: open - Opened by ashuein over 5 years ago

#89 - Highlight patch to allow creating highlights in the view

Pull Request - State: closed - Opened by caoxiaoyi03 almost 6 years ago

#88 - Custom track support temporary merge

Pull Request - State: closed - Opened by caoxiaoyi03 almost 6 years ago

#87 - GIVE-HUG update, tutorial and bower.json patch

Pull Request - State: closed - Opened by caoxiaoyi03 over 6 years ago

#86 - Opening GIVE at a specific position via a link

Issue - State: open - Opened by ifantasy over 6 years ago - 2 comments

#85 - Fixed issue when default track ID list is not provided

Pull Request - State: closed - Opened by caoxiaoyi03 over 6 years ago

#84 - Fixed some bugs

Pull Request - State: closed - Opened by caoxiaoyi03 over 6 years ago

#83 - Initialization of priority managers

Pull Request - State: closed - Opened by caoxiaoyi03 over 6 years ago

#82 - Collapsable track list

Pull Request - State: closed - Opened by caoxiaoyi03 over 6 years ago

#81 - Legacy support patch

Pull Request - State: closed - Opened by caoxiaoyi03 over 6 years ago

#80 - Polymer 2.0 upgrade patch

Pull Request - State: closed - Opened by caoxiaoyi03 over 6 years ago

#79 - Local installation of GIVE

Issue - State: open - Opened by aguffanti over 6 years ago - 3 comments

#78 - Conversions between different genome versions

Issue - State: open - Opened by PhrenoVermouth over 6 years ago - 1 comment

#77 - Fixed interaction display when no centromere exists in the chromosome

Pull Request - State: closed - Opened by caoxiaoyi03 over 6 years ago

#76 - Export to publication quality SVG

Issue - State: open - Opened by asntech over 6 years ago - 1 comment

#75 - Polymer 2.0 upgrade

Pull Request - State: closed - Opened by caoxiaoyi03 over 6 years ago

#74 - Polymer 2.0 upgrade

Pull Request - State: closed - Opened by caoxiaoyi03 over 6 years ago

#72 - Optimized SQL query

Pull Request - State: closed - Opened by caoxiaoyi03 over 6 years ago

#71 - Filter and search update

Pull Request - State: closed - Opened by caoxiaoyi03 over 6 years ago

#70 - Filter and search update

Pull Request - State: closed - Opened by caoxiaoyi03 over 6 years ago

#69 - Filter and search doc update

Pull Request - State: closed - Opened by caoxiaoyi03 over 6 years ago

#68 - Keep Polymer 2.0 upgrade up to date

Pull Request - State: closed - Opened by caoxiaoyi03 over 6 years ago

#67 - Filter and search

Pull Request - State: closed - Opened by caoxiaoyi03 over 6 years ago

#66 - Can't use initial_ref.sh successfully to generate reference data

Issue - State: closed - Opened by annlyuan over 6 years ago - 1 comment

#65 - Toolbox metainfo support

Pull Request - State: closed - Opened by frankyan almost 7 years ago

#64 - Partial gene names update

Pull Request - State: closed - Opened by caoxiaoyi03 almost 7 years ago

#63 - improvement of GIVE-Toolbox

Pull Request - State: closed - Opened by frankyan almost 7 years ago

#62 - improve the password input experience of GIVE-Toolbox

Pull Request - State: closed - Opened by frankyan almost 7 years ago

#61 - fix several add/remove inconsistent bugs of GIVE-Toolbox

Pull Request - State: closed - Opened by frankyan almost 7 years ago

#60 - Bring partial gene name branch up-to-date

Pull Request - State: closed - Opened by caoxiaoyi03 almost 7 years ago

#59 - fix bug in autoscale in add_track_interaction.sh

Pull Request - State: closed - Opened by frankyan almost 7 years ago

#58 - Fix bugs of GIVE-Toolbox

Pull Request - State: closed - Opened by frankyan almost 7 years ago

#57 - Fixing errors for BED format

Pull Request - State: closed - Opened by caoxiaoyi03 almost 7 years ago

#56 - Fixed error for removing track groups

Pull Request - State: closed - Opened by caoxiaoyi03 almost 7 years ago

#55 - Bringing Partial-Gene-Names-Update up to date

Pull Request - State: closed - Opened by caoxiaoyi03 almost 7 years ago

#54 - correct update_give.sh and related documents

Pull Request - State: closed - Opened by frankyan almost 7 years ago

#53 - Remove example data for GIVE-Toolbox

Pull Request - State: closed - Opened by frankyan almost 7 years ago

#52 - Add features and modify documents

Pull Request - State: closed - Opened by frankyan almost 7 years ago

#51 - Bring Partial-Gene-Names-Update up to date to master

Pull Request - State: closed - Opened by caoxiaoyi03 almost 7 years ago

#50 - Default window patch

Pull Request - State: closed - Opened by caoxiaoyi03 almost 7 years ago

#49 - UCSC known gene table format

Pull Request - State: closed - Opened by frankyan almost 7 years ago

#48 - Doc updating for domains

Pull Request - State: closed - Opened by caoxiaoyi03 almost 7 years ago

#46 - Orders of the tracks with the same `priority` value.

Issue - State: closed - Opened by caoxiaoyi03 almost 7 years ago - 1 comment

#45 - Release preparation

Pull Request - State: closed - Opened by caoxiaoyi03 almost 7 years ago

#44 - Bring Release-Preparation up to date

Pull Request - State: closed - Opened by caoxiaoyi03 almost 7 years ago

#43 - Update README.md

Pull Request - State: closed - Opened by zhonglab almost 7 years ago

#42 - About how to deal with batch data

Issue - State: closed - Opened by annlyuan almost 7 years ago - 5 comments
Labels: question

#41 - About data format conversion

Issue - State: closed - Opened by annlyuan almost 7 years ago - 2 comments
Labels: enhancement

#40 - Bed format update

Pull Request - State: closed - Opened by caoxiaoyi03 almost 7 years ago

#39 - Fix links, spelling, and grammar in documentation

Pull Request - State: closed - Opened by adelq almost 7 years ago - 1 comment

#38 - 500 server error when entering gene name in "Coordinate or gene name box"

Issue - State: open - Opened by adelq almost 7 years ago - 5 comments
Labels: Documentation

#37 - Infinite loop in PineNode.js

Issue - State: closed - Opened by adelq almost 7 years ago - 5 comments
Labels: bug

#36 - Add Custom Track button grayed out

Issue - State: closed - Opened by adelq almost 7 years ago - 1 comment
Labels: Documentation

#35 - Update Readme.md

Pull Request - State: closed - Opened by zhonglab almost 7 years ago

#34 - Doc reviewing

Pull Request - State: closed - Opened by alvintzheng almost 7 years ago

#33 - Bring Bed track summaryinto BED Format Update

Pull Request - State: closed - Opened by caoxiaoyi03 almost 7 years ago

#32 - data conversion from different Hi-C contact matrices bin size

Issue - State: open - Opened by LucoLab almost 7 years ago - 1 comment
Labels: Documentation

#31 - ChIA-PET Long Range Interaction can't be modified / Add tracks

Issue - State: open - Opened by LucoLab almost 7 years ago
Labels: enhancement

#30 - add_track_interaction.sh without quantile option says autoscale is empty

Issue - State: closed - Opened by LucoLab almost 7 years ago - 1 comment
Labels: Documentation

#29 - Is is possible to load reference annotation as gtf or gff from gencode/ensembl?

Issue - State: open - Opened by LucoLab almost 7 years ago - 1 comment
Labels: enhancement

#28 - Fast-forwarding bedTrackSummary branch

Pull Request - State: closed - Opened by caoxiaoyi03 almost 7 years ago

#27 - Fast-forwarding Doc-reviewing tree

Pull Request - State: closed - Opened by caoxiaoyi03 almost 7 years ago

#26 - Custom annotation

Issue - State: open - Opened by azkalot1 almost 7 years ago - 3 comments
Labels: bug

#25 - Custom reference genome default regions

Issue - State: closed - Opened by azkalot1 almost 7 years ago - 1 comment
Labels: enhancement

#24 - Doc reviewing

Pull Request - State: closed - Opened by caoxiaoyi03 almost 7 years ago

#23 - update manual 4.3.2 for hic2give

Pull Request - State: closed - Opened by frankyan almost 7 years ago

#22 - Add hic2give to GIVE-Toolbox

Pull Request - State: closed - Opened by frankyan almost 7 years ago

#21 - Generation of Interaction Track

Issue - State: closed - Opened by LucoLab almost 7 years ago - 2 comments
Labels: question

#20 - update bedTrackSummary

Pull Request - State: closed - Opened by caoxiaoyi03 almost 7 years ago

#19 - Doc update

Pull Request - State: closed - Opened by SherryH1229 almost 7 years ago

#18 - Doc update minor update

Pull Request - State: closed - Opened by caoxiaoyi03 almost 7 years ago

#17 - Merge Doc updates into master

Pull Request - State: closed - Opened by caoxiaoyi03 almost 7 years ago

#16 - Tutorials and manual update

Pull Request - State: closed - Opened by caoxiaoyi03 almost 7 years ago

#15 - Give hub updates

Pull Request - State: closed - Opened by caoxiaoyi03 almost 7 years ago

#14 - Added track documents.

Pull Request - State: closed - Opened by caoxiaoyi03 about 7 years ago

#13 - Merging Refactoring code into master

Pull Request - State: closed - Opened by caoxiaoyi03 about 7 years ago

#12 - Track type summary?

Issue - State: closed - Opened by alexpreynolds about 7 years ago - 2 comments

#11 - Reorganize manual and tutorials

Pull Request - State: closed - Opened by frankyan about 7 years ago

#10 - GIVE-Docker tutorial

Pull Request - State: closed - Opened by frankyan about 7 years ago

#9 - Update README.md

Pull Request - State: closed - Opened by Jia340 about 7 years ago - 1 comment

#8 - Update documents to fix Issue #7

Pull Request - State: closed - Opened by caoxiaoyi03 over 7 years ago

#7 - GIVE doesn't see a created reference database?

Issue - State: closed - Opened by KolchenkoSergey over 7 years ago - 11 comments

#6 - Finished Demo2

Pull Request - State: closed - Opened by frankyan over 7 years ago

#5 - Change figure

Pull Request - State: closed - Opened by frankyan over 7 years ago

#4 - Add gallery and finished Demo1 Code tutorial

Pull Request - State: closed - Opened by frankyan over 7 years ago

#3 - data conversion

Pull Request - State: closed - Opened by qiuyangwu over 7 years ago

#2 - Update 1-knownCodeDataSource.md

Pull Request - State: closed - Opened by caoxiaoyi03 over 7 years ago

#1 - short code example description

Pull Request - State: closed - Opened by qiuyangwu over 7 years ago