XiaoTaoWang/TADLib issues and pull requests

#29 - Error with domaincaller

Issue - State: open - Opened by jeff-godwin 3 months ago

#28 - hitad : error

Issue - State: open - Opened by yyzheng-216 5 months ago - 1 comment

#27 - IndexError: list index out of range

Issue - State: open - Opened by bam-xiaomu 9 months ago - 1 comment

#26 - Empy plot while visualizing

Issue - State: open - Opened by IsMM15 10 months ago

#25 - Use '::' to specify a group path"

Issue - State: open - Opened by bam-13 about 1 year ago - 3 comments

#24 - Error running hitad: IndexError: index -1 is out of bounds for axis 0 with size 0

Issue - State: closed - Opened by MyBiscuit about 2 years ago

#23 - Error running hitad

Issue - State: closed - Opened by MyBiscuit about 2 years ago - 2 comments

#22 - my .cool file without DIs,how can i add this to my cool file

Issue - State: open - Opened by Fmh2417 about 2 years ago - 1 comment

#21 - KeyError: 0

Issue - State: closed - Opened by wbszhu about 2 years ago - 3 comments

#20 - error: "hitad: error: argument -d/--datasets: invalid datasets_convert value

Issue - State: open - Opened by Shaedeycool over 2 years ago - 4 comments

#19 - TAD alignment problem between two samples

Issue - State: open - Opened by shenlinyong over 2 years ago - 1 comment

#18 - IndexError: index -1 is out of bounds for axis 0 with size 0

Issue - State: open - Opened by Wyinghao over 2 years ago - 6 comments

#17 - The range of values for the AP

Issue - State: closed - Opened by shenlinyong over 2 years ago - 2 comments

#16 - Problems with running TADLib

Issue - State: closed - Opened by shenlinyong over 2 years ago - 5 comments

#15 - Joblib library error and ValueError

Issue - State: open - Opened by JSegueni about 3 years ago - 2 comments

#14 - RunTimeWarning: Invalid value found in long_scalars()

Issue - State: open - Opened by tiikachu over 3 years ago - 1 comment

#13 - Passing int(snum) rather than relying on numpy.linspace().

Pull Request - State: closed - Opened by crowja over 4 years ago - 3 comments

#12 - Program error with output

Issue - State: open - Opened by dhrititandon over 5 years ago - 3 comments

#11 - HiTAD - TypeError: 'NoneType object is not subscriptable'

Issue - State: closed - Opened by StephenRicher over 5 years ago - 4 comments

#10 - Undefined behavior: program abort when there are small/empty matrix in cool file

Pull Request - State: closed - Opened by Nanguage about 6 years ago

#9 - How to dela with the overlap between Conserved TAD boundarie and Sub-TAD to TAD boundaries from tadlib.hitad.aligner

Issue - State: closed - Opened by liufuyan2016 over 6 years ago - 1 comment

#8 - ValueError: Empty DI sequences for HMM training

Issue - State: closed - Opened by chenxq815 over 6 years ago - 2 comments

#7 - A question about running HiTAD

Issue - State: closed - Opened by dangdachang over 6 years ago - 4 comments

#6 - Cooler format and Python3 support

Issue - State: closed - Opened by Nanguage over 6 years ago - 5 comments

#5 - Using mouse Hi-C data processed by HiC-Pro

Issue - State: closed - Opened by oriolfornes over 6 years ago - 1 comment

#4 - The matrix file from HiC-Pro could be used as hitad input?

Issue - State: closed - Opened by liufuyan2016 about 7 years ago - 1 comment

#3 - AssertionError

Issue - State: closed - Opened by ghost about 7 years ago - 2 comments

#2 - Error return without exception set

Issue - State: closed - Opened by laraib85 over 7 years ago - 8 comments

#1 - Include data files in egg

Issue - State: closed - Opened by XiaoTaoWang about 10 years ago

Ecosyste.ms: Issues

GitHub / XiaoTaoWang/TADLib issues and pull requests