VectorInstitute/cyclops issues and pull requests

#386 - Add eICU querier with example tutorial

Pull Request - State: closed - Opened by amrit110 over 1 year ago

#385 - Add support for using the query op Apply with multiple column inputs

Issue - State: closed - Opened by amrit110 over 1 year ago
Labels: enhancement, good first issue

#384 - Enable --strict for mypy

Pull Request - State: closed - Opened by hoxovic over 1 year ago - 2 comments

#383 - Fix extras installs, was not working as intended before

Pull Request - State: closed - Opened by amrit110 over 1 year ago

#382 - Downgrade sphinx-rtd-theme since it seems to mess with doc formatting

Pull Request - State: closed - Opened by amrit110 over 1 year ago

#381 - Add import error catch for query API

Pull Request - State: closed - Opened by amrit110 over 1 year ago

#380 - Update readme about separating dependencies for APIs

Pull Request - State: closed - Opened by amrit110 over 1 year ago

#379 - Split dependencies such that they can be installed optionally for APIs

Pull Request - State: closed - Opened by amrit110 over 1 year ago

#378 - Add base DatasetQuerier to show up in docs

Pull Request - State: closed - Opened by amrit110 over 1 year ago
Labels: documentation

#377 - Increase mypy strictness and fix issues

Issue - State: closed - Opened by amrit110 over 1 year ago - 3 comments
Labels: good first issue, code style, refactor

#376 - Add tests for add_column and mimic query functions

Pull Request - State: closed - Opened by amrit110 over 1 year ago

#375 - Add query ops tests

Pull Request - State: closed - Opened by amrit110 over 1 year ago

#374 - Move prefect to dev deps, update other deps

Pull Request - State: closed - Opened by amrit110 over 1 year ago

#373 - Add new cyclops webpage

Pull Request - State: closed - Opened by amrit110 over 1 year ago - 1 comment
Labels: documentation, enhancement

#372 - Remove unused old functions

Pull Request - State: closed - Opened by amrit110 over 1 year ago

#371 - Refactor dataset query APIs

Pull Request - State: closed - Opened by amrit110 over 1 year ago - 1 comment

#370 - query dataset APIs design review

Issue - State: closed - Opened by amrit110 over 1 year ago
Labels: refactor

#369 - Update query API tutorial docs

Pull Request - State: closed - Opened by amrit110 over 1 year ago
Labels: enhancement, tests, refactor

#368 - Dynamically offer every method and attribute of the PyTorch model in the PTModel wrapper

Issue - State: closed - Opened by fcogidi over 1 year ago
Labels: enhancement

#367 - Support user-defined model directory in PTModel

Issue - State: closed - Opened by fcogidi over 1 year ago
Labels: enhancement

#366 - Loss reweighting?

Issue - State: closed - Opened by fcogidi over 1 year ago
Labels: question, refactor

#365 - Support model validation during training for the PyTorch wrapper

Issue - State: closed - Opened by fcogidi over 1 year ago
Labels: enhancement, refactor

#364 - Add support for model hyperparameter tuning

Issue - State: closed - Opened by fcogidi over 1 year ago
Labels: enhancement, refactor

#363 - Add condition regexmatch op

Pull Request - State: closed - Opened by amrit110 over 1 year ago

#362 - Add query tutorial to docs

Pull Request - State: closed - Opened by amrit110 over 1 year ago
Labels: documentation

#361 - Add support for query op for regex based filtering

Issue - State: closed - Opened by amrit110 over 1 year ago
Labels: enhancement, good first issue

#360 - Add apply operation to query operations

Pull Request - State: closed - Opened by amrit110 over 1 year ago

#359 - Add support to GroupbyAggregate over same column, using multiple aggfuncs

Issue - State: closed - Opened by amrit110 over 1 year ago
Labels: enhancement, good first issue

#358 - Fix groupbyagg docstring

Pull Request - State: closed - Opened by amrit110 over 1 year ago

#357 - Normalize sequence of fractions if sum > 1

Pull Request - State: closed - Opened by hoxovic over 1 year ago

#356 - Add link to CONTRIBUTING.md in README

Pull Request - State: closed - Opened by hoxovic over 1 year ago - 1 comment

#355 - Add test for load_dataframe supporting dask

Pull Request - State: closed - Opened by amrit110 over 1 year ago

#354 - Normalize split fractions?

Issue - State: closed - Opened by hoxovic over 1 year ago
Labels: enhancement, good first issue

#353 - Use TypeErrors when user supplies wrong type(s)

Pull Request - State: closed - Opened by hoxovic over 1 year ago

#352 - Feature store support using feast

Issue - State: closed - Opened by amrit110 over 1 year ago - 1 comment
Labels: enhancement

#351 - Remove types in docstrings

Pull Request - State: closed - Opened by amrit110 over 1 year ago - 1 comment

#350 - Rename query process to ops, postprocess to post_process

Pull Request - State: closed - Opened by amrit110 over 1 year ago

#349 - Add support for querying in batches using dask

Pull Request - State: closed - Opened by amrit110 almost 2 years ago
Labels: enhancement, refactor

#348 - Add tests for impute funcs

Pull Request - State: closed - Opened by amrit110 almost 2 years ago

#347 - Process batching using dask

Issue - State: closed - Opened by amrit110 almost 2 years ago - 1 comment
Labels: enhancement, refactor

#346 - Query batching using dask

Issue - State: closed - Opened by amrit110 almost 2 years ago
Labels: enhancement, refactor

#345 - Fix sqlalchemy type casting, autoapi options to doc members

Pull Request - State: closed - Opened by amrit110 almost 2 years ago

#344 - Update log test which includes logging to file

Pull Request - State: closed - Opened by amrit110 almost 2 years ago

#343 - Add kwargs to querier, refactor API, improve docs

Pull Request - State: closed - Opened by amrit110 almost 2 years ago
Labels: documentation, refactor

#342 - Improve docs, errors

Pull Request - State: closed - Opened by amrit110 almost 2 years ago
Labels: documentation

#341 - Add string_agg to GroupbyAggregate

Pull Request - State: closed - Opened by amrit110 almost 2 years ago

#340 - Fix docstrings, add additional tests

Pull Request - State: closed - Opened by amrit110 almost 2 years ago
Labels: documentation, tests, code style

#339 - use models from cyclops/models and delete baseline_models

Pull Request - State: closed - Opened by a-kore almost 2 years ago
Labels: refactor

#338 - Add more integration tests to query process fns

Pull Request - State: closed - Opened by amrit110 almost 2 years ago
Labels: tests

#337 - Update integration testing dataset, formalizing its generation

Pull Request - State: closed - Opened by amrit110 almost 2 years ago

#336 - Added stratified and k-fold validation splitting functions.

Pull Request - State: closed - Opened by KadenMc almost 2 years ago
Labels: enhancement

#335 - Improve query process ops, add more integration tests

Pull Request - State: closed - Opened by amrit110 almost 2 years ago
Labels: tests

#334 - Remove baseline_models dependency

Issue - State: closed - Opened by amrit110 almost 2 years ago - 1 comment
Labels: enhancement, refactor

#333 - Fixed fractions_to_split fractions mutation bug.

Pull Request - State: closed - Opened by KadenMc almost 2 years ago
Labels: bug

#332 - Linking "Contributing to cyclops" under Getting Started's "Developing" subsection

Issue - State: closed - Opened by KadenMc almost 2 years ago
Labels: documentation

#331 - Update Use_cases

Pull Request - State: closed - Opened by mahshidaln almost 2 years ago
Labels: refactor

#330 - Small fix to readme

Pull Request - State: closed - Opened by amrit110 almost 2 years ago

#329 - Update README.md

Pull Request - State: closed - Opened by elhamdolatabadi almost 2 years ago

#328 - Update models data path

Pull Request - State: closed - Opened by mahshidaln almost 2 years ago

#326 - Add evaluator

Pull Request - State: closed - Opened by fcogidi almost 2 years ago - 3 comments
Labels: enhancement, refactor

GitHub / VectorInstitute/cyclops issues and pull requests