USGS-R/lake-temperature-process-models issues and pull requests

#81 - Prepare for Upcoming DGEC Transition

Pull Request - State: closed - Opened by jesse-ross almost 2 years ago

#80 - Results to netCDF format

Pull Request - State: closed - Opened by hcorson-dosch-usgs almost 2 years ago

#79 - Combine steps to generate GCM output feathers and output tibble

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago

#78 - Add dependency to evaluation pred-obs matching

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago

#77 - Fix sim dir bug

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago

#76 - Clarify that burn in/out is added in this function

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago - 1 comment

#75 - Extrapolate preds

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago - 1 comment

#74 - Add R markdown summary

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago - 1 comment

#73 - Use latest ncdfgeom

Pull Request - State: closed - Opened by jesse-ross over 2 years ago - 1 comment

#72 - switch to regex in place of string matching

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago

#71 - Drop mapping when building export file tibbles

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago - 4 comments

#68 - Only model lakes in CASC states

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago

#67 - Expand GCM runs to full footprint

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago

#66 - Looking for `lake_cell_tile_xwalk.csv` and `GCM_{gcm name}.nc` for MO models

Issue - State: closed - Opened by padilla410 over 2 years ago - 2 comments

#65 - Make season a factor

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago - 1 comment

#64 - Add evaluation of contemporary GCM model predictions

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago - 2 comments

#63 - Group GCM runs by site_id to reduce # branches

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago

#62 - Add model evaluation for NLDAS bottom predictions

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago

#61 - Add ice layers check

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago

#60 - Document model export files in csv

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago

#59 - Decide on binning/interpolation approach for matching predictions to observations

Issue - State: closed - Opened by hcorson-dosch-usgs over 2 years ago - 4 comments

#58 - Expand NLDAS runs to full footprint

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago

#56 - Nldas surface eval

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago

#55 - Add nldas evaluation

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago

#54 - Update README.md

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago - 1 comment

#53 - Update README.md

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago - 1 comment

#52 - Add example workflow to README

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago - 1 comment

#51 - Remove unused 1_prep/tmp dir (previously used for workaround feathers)

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago - 1 comment

#50 - Remove unused 2_run/out directory

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago - 1 comment

#49 - Reduce to max of 2 retries

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago - 1 comment

#48 - Add nldas runs

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago - 1 comment

#47 - adjust grouping

Pull Request - State: closed - Opened by hcorson-dosch-usgs over 2 years ago

#44 - Update README.md

Pull Request - State: closed - Opened by hcorson-dosch-usgs almost 3 years ago

#43 - Docker umask fix

Pull Request - State: closed - Opened by jesse-ross almost 3 years ago

#42 - When scale up to full footprint, move to writing meteo data to feathers by tile

Issue - State: open - Opened by hcorson-dosch-usgs almost 3 years ago

#41 - Bundle simulations when scale up to midwest

Issue - State: closed - Opened by hcorson-dosch-usgs almost 3 years ago - 1 comment

#40 - Add docker setup; propose move to tallgrass

Pull Request - State: closed - Opened by jesse-ross almost 3 years ago - 5 comments

#39 - Remove resampling code, since hypso in nml_list.rds is already resampled

Pull Request - State: closed - Opened by hcorson-dosch-usgs almost 3 years ago

#38 - ncdfgeom approach for pulling data from netCDFs

Pull Request - State: closed - Opened by hcorson-dosch-usgs almost 3 years ago - 2 comments

#37 - Add plots

Pull Request - State: closed - Opened by hcorson-dosch-usgs almost 3 years ago - 2 comments

#36 - Extract more output

Pull Request - State: closed - Opened by hcorson-dosch-usgs almost 3 years ago

#35 - Update uses of cell_no and tile_no given new lake_cell_tile_xwalk

Pull Request - State: closed - Opened by hcorson-dosch-usgs almost 3 years ago

#34 - Explore the sites with unusually high or low temps

Issue - State: open - Opened by lindsayplatt almost 3 years ago - 2 comments

#33 - Switch code to use driver data from NetCDF not feathers

Issue - State: closed - Opened by lindsayplatt almost 3 years ago - 1 comment

#32 - Run GLM models using updated NA cell fix

Issue - State: closed - Opened by lindsayplatt almost 3 years ago - 2 comments

#31 - Get GLM output into netCDF DSG format

Issue - State: open - Opened by hcorson-dosch-usgs almost 3 years ago - 10 comments
Labels: enhancement

#30 - add instructions for running RStudio on tallgrass

Pull Request - State: closed - Opened by jesse-ross almost 3 years ago - 1 comment

#29 - Fix nml object use

Pull Request - State: closed - Opened by hcorson-dosch-usgs almost 3 years ago - 1 comment

#28 - Set up GLM code to use "DataWarp" burst buffer for GLM I/O operations

Issue - State: open - Opened by hcorson-dosch-usgs almost 3 years ago

#27 - change order of gcm name and site id in outfile file name template

Pull Request - State: closed - Opened by hcorson-dosch-usgs almost 3 years ago - 2 comments

#26 - Edit packaging code

Pull Request - State: closed - Opened by hcorson-dosch-usgs almost 3 years ago - 1 comment

#25 - Remove resampling code

Issue - State: closed - Opened by hcorson-dosch-usgs almost 3 years ago - 1 comment

#24 - Add initial code that resamples all hypsos to 1-m intervals

Pull Request - State: closed - Opened by hcorson-dosch-usgs almost 3 years ago - 2 comments

#23 - Add code to catch errors in extracting model output

Pull Request - State: closed - Opened by hcorson-dosch-usgs almost 3 years ago - 1 comment

#22 - Current passing of nmls as single object triggers unnecessary rebuilds w/ change to lake ids vector

Issue - State: closed - Opened by hcorson-dosch-usgs almost 3 years ago - 2 comments

#21 - Package output

Pull Request - State: closed - Opened by hcorson-dosch-usgs almost 3 years ago - 1 comment

#20 - Package up GLM outputs to share for use in the next couple of weeks

Issue - State: closed - Opened by lindsayplatt almost 3 years ago - 9 comments

#19 - Fix shifter docs

Pull Request - State: closed - Opened by jesse-ross almost 3 years ago

#18 - Inspect initial model results

Issue - State: closed - Opened by hcorson-dosch-usgs almost 3 years ago - 10 comments

#17 - Failed runs upon scaling up to MN

Issue - State: closed - Opened by hcorson-dosch-usgs about 3 years ago - 35 comments

#16 - Expand to full set of MN lakes and unbiased GCM data

Pull Request - State: closed - Opened by hcorson-dosch-usgs about 3 years ago

#15 - In test GLM runs, lakes are losing water

Issue - State: closed - Opened by hcorson-dosch-usgs about 3 years ago - 7 comments

#14 - set option for clustermq scheduler

Pull Request - State: closed - Opened by hcorson-dosch-usgs about 3 years ago

#13 - Populate readme

Pull Request - State: closed - Opened by hcorson-dosch-usgs about 3 years ago - 1 comment

#12 - Expand glm to all dates

Pull Request - State: closed - Opened by hcorson-dosch-usgs about 3 years ago

#11 - Remove burn-in and burn-out periods before combining output

Issue - State: closed - Opened by hcorson-dosch-usgs about 3 years ago - 1 comment

#10 - Glm adjustments

Pull Request - State: closed - Opened by hcorson-dosch-usgs about 3 years ago

#9 - Pipeline hanging on builds?

Issue - State: closed - Opened by hcorson-dosch-usgs about 3 years ago - 7 comments
Labels: question

#8 - Need to programmatically pull GLM version

Issue - State: closed - Opened by hcorson-dosch-usgs about 3 years ago - 11 comments

#7 - How do we want to combine the GLM output?

Issue - State: closed - Opened by hcorson-dosch-usgs about 3 years ago - 6 comments

#6 - Set up pipeline to run glm models and extract output

Pull Request - State: closed - Opened by hcorson-dosch-usgs about 3 years ago - 6 comments

#5 - Update shifter image on Denali to latest version of GLM, after initial testing

Issue - State: open - Opened by hcorson-dosch-usgs about 3 years ago - 26 comments

#4 - Transferring files generated in lake-temperature-model-prep to Caldera

Issue - State: open - Opened by hcorson-dosch-usgs about 3 years ago - 4 comments

#3 - Where should we add the meteo file information to the nmls?

Issue - State: closed - Opened by hcorson-dosch-usgs about 3 years ago - 3 comments

#2 - Approach to parallelization

Issue - State: closed - Opened by hcorson-dosch-usgs about 3 years ago - 41 comments

#1 - Implement targets workflow to run GLM models

Issue - State: closed - Opened by hcorson-dosch-usgs about 3 years ago - 1 comment

GitHub / USGS-R/lake-temperature-process-models issues and pull requests