Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / USGS-R/drb-estuary-salinity-ml issues and pull requests

#135 - change output dir for modeling inputs

Pull Request - State: closed - Opened by amsnyder over 1 year ago

#134 - remove submodule and fixes for reproducibility

Pull Request - State: closed - Opened by amsnyder over 1 year ago

#133 - Prepare for Upcoming DGEC Transition

Pull Request - State: open - Opened by jesse-ross over 1 year ago - 3 comments

#132 - Data release

Pull Request - State: closed - Opened by galengorski over 1 year ago

#130 - Discussion: Ideas on how to use information theory to assess models

Issue - State: open - Opened by amsnyder almost 2 years ago - 8 comments

#129 - Discussion: What is the best time scale to use for our models and analysis?

Issue - State: open - Opened by amsnyder almost 2 years ago - 10 comments

#128 - Discussion: Git workflow for editing pipeline more cleanly

Issue - State: open - Opened by amsnyder almost 2 years ago - 1 comment

#127 - Discussion: River pathway along which we want to calculate salt front location

Issue - State: open - Opened by amsnyder almost 2 years ago - 2 comments

#126 - Add lagged input

Pull Request - State: closed - Opened by galengorski almost 2 years ago - 2 comments

#124 - add functional performance functions snakemake

Pull Request - State: closed - Opened by galengorski almost 2 years ago - 1 comment

#123 - Update README.md

Pull Request - State: closed - Opened by galengorski about 2 years ago

#122 - Functional performance

Pull Request - State: closed - Opened by galengorski about 2 years ago - 1 comment

#121 - Interpreting functional performance of estuary salinity model

Issue - State: open - Opened by galengorski about 2 years ago - 8 comments

#120 - Create README file

Issue - State: closed - Opened by galengorski about 2 years ago

#119 - Add saltfront_record.R to snakefile_fetch_munge

Issue - State: open - Opened by galengorski about 2 years ago

#118 - Salt front munge seed

Pull Request - State: closed - Opened by galengorski about 2 years ago

#117 - 03b modeling steps cleaner

Pull Request - State: closed - Opened by galengorski about 2 years ago - 2 comments

#116 - add 02_munge/in and model_config changes

Pull Request - State: closed - Opened by galengorski about 2 years ago

#115 - 03b modeling steps cleaner

Pull Request - State: closed - Opened by galengorski about 2 years ago

#114 - pull main commits into 03b_modeling_steps_cleaner

Pull Request - State: closed - Opened by galengorski about 2 years ago

#113 - Pipeline Improvements

Issue - State: open - Opened by amsnyder about 2 years ago

#112 - add s3 fetch of nerrs zipfile

Pull Request - State: closed - Opened by amsnyder about 2 years ago

#111 - add 2016 data links for coawst

Pull Request - State: closed - Opened by amsnyder about 2 years ago

#110 - add in/out folder creation

Pull Request - State: closed - Opened by amsnyder about 2 years ago

#109 - Add transfer entropy

Pull Request - State: closed - Opened by galengorski about 2 years ago

#108 - sort dataframes when pulling out max value so indices match

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#106 - Add munge out to sf

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#105 - Issues building the pipeline

Issue - State: closed - Opened by jds485 over 2 years ago - 8 comments

#104 - remove IT outputs from fetch_munge_snakefile

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#103 - Fetch full year of COAWST model output

Issue - State: open - Opened by amsnyder over 2 years ago

#102 - Error when fetching COAWST model results using #99

Issue - State: open - Opened by galengorski over 2 years ago

#101 - add replicates and docstrings to run_model

Pull Request - State: closed - Opened by galengorski over 2 years ago - 5 comments

#100 - Correct air pressure anomaly

Pull Request - State: closed - Opened by galengorski over 2 years ago

#99 - Update sf calc

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#98 - Comment coawst

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#95 - troubleshooting fetch_munge snakefile

Pull Request - State: closed - Opened by galengorski over 2 years ago - 1 comment

#94 - update yaml

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#93 - speed up salt_front_timeseries function

Pull Request - State: closed - Opened by ted80810 over 2 years ago

#92 - update pulling salt variable

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#89 - change params_config_fetch_usgs_nwis.yaml start_dt

Pull Request - State: closed - Opened by galengorski over 2 years ago

#88 - update river mile coods fp

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#87 - add space to comment with notes about load_COAWST_model_run function

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#86 - add gap fill into munge_noaa_nerr

Pull Request - State: closed - Opened by galengorski over 2 years ago - 1 comment

#85 - small fixes to make code run

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#84 - Update environment.yaml

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#83 - restructure model input source files

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#82 - add munge script for noaa nerrs data

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#81 - NERRS and gridMET windspeed data do not agree

Issue - State: open - Opened by galengorski over 2 years ago

#80 - incorporate discharge filling in to pipeline

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#79 - Site pipeline splitting

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#78 - Split snakemake pipeline by site - fetch and munge

Pull Request - State: closed - Opened by amsnyder over 2 years ago - 1 comment

#77 - update usgs fetch script for snakemake pipeline split by site

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#76 - update munge and it_analysis to reflect splitting at munge step

Pull Request - State: closed - Opened by galengorski over 2 years ago - 1 comment

#75 - Parallel pipelines for IT and ML

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#74 - branch into it analysis and baseline ml model pipelines a and b

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#73 - Fetch/process COAWST Model runs

Issue - State: open - Opened by ted80810 over 2 years ago - 3 comments

#72 - Add Script to fetch COAWST model run

Pull Request - State: closed - Opened by ted80810 over 2 years ago - 3 comments

#71 - update folder structure with daily, hourly, etc.

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#69 - add atmospheric pressure to noaa fetch and munge steps

Pull Request - State: closed - Opened by galengorski over 2 years ago

#68 - add atmospheric pressure into noaa fetch

Issue - State: open - Opened by galengorski over 2 years ago - 5 comments

#67 - add function to extract daily tidal data

Pull Request - State: closed - Opened by galengorski over 2 years ago - 1 comment

#66 - pass s3_client in to read_data function

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#65 - Testing information theory functions

Issue - State: open - Opened by galengorski over 2 years ago - 3 comments

#64 - Extract daily data from sub-daily tidal data

Issue - State: open - Opened by galengorski over 2 years ago - 3 comments

#63 - Add transfer entropy

Pull Request - State: closed - Opened by galengorski over 2 years ago - 1 comment

#62 - Update it analysis for met data

Pull Request - State: closed - Opened by galengorski over 2 years ago

#61 - Fill water level gaps

Pull Request - State: closed - Opened by amsnyder over 2 years ago - 2 comments

#60 - add fetch_gridmet.R

Pull Request - State: closed - Opened by galengorski over 2 years ago

#59 - Revert "add R script for fetching gridmet"

Pull Request - State: closed - Opened by galengorski over 2 years ago

#58 - butterworth filter not working on all sites

Issue - State: closed - Opened by amsnyder over 2 years ago - 5 comments

#57 - fix fc

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#56 - add R script for fetching gridmet

Pull Request - State: closed - Opened by galengorski over 2 years ago - 1 comment

#55 - change file path to include updated salt front time series

Pull Request - State: closed - Opened by galengorski over 2 years ago

#54 - Add jupyter notebook

Pull Request - State: closed - Opened by ted80810 over 2 years ago

#53 - update NOAA fetch/munge

Pull Request - State: closed - Opened by amsnyder over 2 years ago - 4 comments

#52 - update IT figure naming

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#51 - Adding initial information theory functions

Pull Request - State: closed - Opened by galengorski over 2 years ago - 1 comment

#49 - Combine multiple CSVs Into one CSV S3

Pull Request - State: closed - Opened by ted80810 over 2 years ago

#46 - update output file naming

Pull Request - State: closed - Opened by amsnyder over 2 years ago

#45 - update IT code to run

Pull Request - State: closed - Opened by amsnyder over 2 years ago - 1 comment

#44 - update Snakefile

Issue - State: closed - Opened by galengorski over 2 years ago

#43 - Bindertest

Pull Request - State: closed - Opened by ted80810 over 2 years ago

#42 - Create toggle to read data locally

Pull Request - State: closed - Opened by amsnyder over 2 years ago - 1 comment

#41 - Develop Binder for Salt_front_drivers_exploration notebook

Issue - State: open - Opened by ted80810 over 2 years ago - 4 comments

#35 - begin to integrate it analysis data prep into pipeline

Pull Request - State: closed - Opened by galengorski over 2 years ago

#31 - Develop data coverage plots for historical NOAA and USGS

Issue - State: closed - Opened by amsnyder over 2 years ago - 1 comment

#24 - Fetch multiple NOAA stations

Issue - State: closed - Opened by amsnyder almost 3 years ago - 3 comments

#23 - Implement snakemake on fetch and munge steps

Issue - State: closed - Opened by amsnyder almost 3 years ago - 2 comments

#22 - Add NOAA NOS munge step

Issue - State: closed - Opened by amsnyder almost 3 years ago

#21 - Add config file to NOAA NOS fetch step

Issue - State: closed - Opened by amsnyder almost 3 years ago - 4 comments

#17 - calculation of salt front

Issue - State: open - Opened by galengorski almost 3 years ago - 7 comments

#15 - add parameter codes that we want to process to config

Pull Request - State: closed - Opened by amsnyder almost 3 years ago - 1 comment

#13 - Timezones for aggregating sub-daily data

Issue - State: closed - Opened by galengorski almost 3 years ago

#6 - Config and utils setup

Pull Request - State: closed - Opened by amsnyder almost 3 years ago - 1 comment