Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / USEPA/CompTox-ToxCast-tcpl issues and pull requests

#79 - 32 implemented single concentration bidirectional=false method

Pull Request - State: closed - Opened by cthunes over 1 year ago

#78 - Remove deprecated tcplPlotFitc.R

Issue - State: open - Opened by madison-feshuk over 1 year ago

#77 - NULL chid in tcplCytoPt output

Issue - State: closed - Opened by madison-feshuk over 1 year ago - 2 comments
Labels: bug

#76 - 58 updated license and added myself as contributor

Pull Request - State: closed - Opened by cthunes over 1 year ago

#75 - 74 Tests changed to expect_snapshot_value()

Pull Request - State: closed - Opened by cthunes over 1 year ago
Labels: bug

#74 - Investigate testing without the use of expect_snapshot

Issue - State: closed - Opened by cthunes over 1 year ago
Labels: bug

#73 - 70 Investigate full coverage for tcplDefine. Updated tcplQuery/tcplDefine for example data

Pull Request - State: open - Opened by cthunes over 1 year ago - 6 comments
Labels: enhancement

#72 - #24 Data retrieval vignette update

Pull Request - State: closed - Opened by cthunes over 1 year ago
Labels: enhancement

#71 - Added ToxCast Pipeline overview diagram to vignettes

Pull Request - State: closed - Opened by cthunes over 1 year ago
Labels: enhancement

#69 - Interactive plotly plot loads very slow

Issue - State: closed - Opened by brown-jason over 1 year ago
Labels: bug

#68 - bug building v2 vignette

Issue - State: closed - Opened by brown-jason over 1 year ago
Labels: bug

#67 - #64 Created tcplDefine function

Pull Request - State: closed - Opened by cthunes over 1 year ago - 4 comments
Labels: enhancement

#66 - Add mc5 fit categories diagram and text to processing vignette

Issue - State: closed - Opened by madison-feshuk over 1 year ago - 1 comment
Labels: enhancement

#65 - issue-63 remove <br/> from vignette links

Pull Request - State: closed - Opened by cthunes over 1 year ago

#64 - Create tcplDefine function

Issue - State: closed - Opened by madison-feshuk over 1 year ago
Labels: enhancement

#63 - Remove "<br />" from vignette index titles

Issue - State: closed - Opened by madison-feshuk over 1 year ago
Labels: bug

#62 - TOX-602 Summary statistics need to account for bidirectional fitting

Issue - State: closed - Opened by brown-jason over 1 year ago - 7 comments

#61 - Remove hard coded mc5 and mc6 methods

Issue - State: open - Opened by madison-feshuk over 1 year ago - 4 comments
Labels: bug

#60 - Update tcplPlot and processing for control data inclusion

Issue - State: closed - Opened by madison-feshuk over 1 year ago - 1 comment
Labels: enhancement

#59 - Add medresp.3bmad flag

Issue - State: closed - Opened by madison-feshuk over 1 year ago
Labels: enhancement

#58 - Update License to 2023

Issue - State: closed - Opened by brown-jason over 1 year ago

#57 - Add compare parameter in tcplPlot

Issue - State: closed - Opened by madison-feshuk over 1 year ago - 2 comments
Labels: enhancement

#56 - Add ToxCast pipeline overview diagram to vignettes

Issue - State: closed - Opened by madison-feshuk over 1 year ago
Labels: enhancement

#54 - data dictionary?

Issue - State: closed - Opened by tcrombie over 1 year ago - 2 comments

#53 - 50 investigateresolve warnings during plotting

Pull Request - State: closed - Opened by kurtdunham over 1 year ago - 1 comment

#52 - tcplprepotpt returns sql error when datatable with 0 rows are input

Issue - State: closed - Opened by brown-jason over 1 year ago
Labels: bug

#51 - 35 investigate GitHub actions for test coverage

Pull Request - State: closed - Opened by kurtdunham over 1 year ago

#50 - Investigate/resolve warnings during plotting

Issue - State: open - Opened by brown-jason over 1 year ago - 1 comment

#49 - TOX-96 tcplPlotPlate not working with sc data

Issue - State: open - Opened by madison-feshuk over 1 year ago

#47 - TOX-444 tcplCytoPt and use_global_mad=FALSE

Issue - State: closed - Opened by brown-jason over 1 year ago - 1 comment

#46 - Add mc4 bidirectional.false.loss method

Issue - State: closed - Opened by madison-feshuk over 1 year ago - 2 comments
Labels: enhancement

#45 - 43 tcplplot bmrbmd line intersection for plots in the negative analysis direction

Pull Request - State: closed - Opened by kurtdunham over 1 year ago - 1 comment

#44 - Investigate snapshot issue where svg file is not consistent between environments.

Issue - State: open - Opened by brown-jason over 1 year ago - 1 comment
Labels: bug

#42 - add option for export_ready status in tcplsubsetchid

Issue - State: closed - Opened by brown-jason over 1 year ago

#41 - added check for bmd and ac50 in bmd.high flagging

Pull Request - State: closed - Opened by brown-jason over 1 year ago - 1 comment

#40 - Level 6 processing error

Issue - State: closed - Opened by brown-jason over 1 year ago

#39 - Make tcplCytoPt backwards compatible

Issue - State: open - Opened by brown-jason over 1 year ago

#38 - tcplCytoPt update

Pull Request - State: closed - Opened by brown-jason over 1 year ago

#37 - #30 Create Unit Tests with Example Data

Pull Request - State: closed - Opened by kurtdunham over 1 year ago

#36 - tcplloaddata not working for old versions of db

Issue - State: closed - Opened by brown-jason over 1 year ago
Labels: bug

#35 - Investigate GitHub Actions for test coverage

Issue - State: closed - Opened by kurtdunham over 1 year ago
Labels: question

#33 - Create overfit.hit method for level 6 processing

Issue - State: open - Opened by brown-jason over 1 year ago - 2 comments

#32 - Single Conc Bidirectional = FALSE method

Issue - State: closed - Opened by brown-jason over 1 year ago - 1 comment

#31 - 19-bidirectional-sc-methods

Pull Request - State: closed - Opened by brown-jason over 1 year ago - 4 comments

#30 - Create Unit tests with example data

Issue - State: closed - Opened by brown-jason over 1 year ago

#26 - 25-tcplloaddata-mc4-addfld=false-sql-syntax-error

Pull Request - State: closed - Opened by brown-jason over 1 year ago

#25 - tcplLoadData mc4, add.fld=FALSE - SQL syntax error

Issue - State: closed - Opened by kurtdunham over 1 year ago
Labels: bug

#24 - Data retrieval vignette update: Annotations retrieval

Issue - State: closed - Opened by madison-feshuk over 1 year ago
Labels: enhancement

#22 - 21 tcplcytopt update

Pull Request - State: closed - Opened by brown-jason almost 2 years ago - 2 comments

#21 - tcplCytoPt() update

Issue - State: closed - Opened by kpaulfriedman almost 2 years ago
Labels: bug, enhancement

#19 - bidirectional sc methods

Issue - State: closed - Opened by kpaulfriedman almost 2 years ago - 1 comment
Labels: bug, enhancement

#18 - Testing github projects

Issue - State: closed - Opened by brown-jason almost 2 years ago

#17 - Main

Pull Request - State: closed - Opened by brown-jason about 2 years ago

#16 - Main

Pull Request - State: closed - Opened by brown-jason about 2 years ago

#15 - Issues with the next version of ggplot2

Issue - State: closed - Opened by thomasp85 about 2 years ago

#14 - bmad calculation

Issue - State: closed - Opened by t-anton over 2 years ago

#13 - Dots for tcpl conf

Pull Request - State: closed - Opened by brown-jason almost 4 years ago

#12 - tcplLite overwriting mc0 with replicate plates

Issue - State: closed - Opened by paulsonak almost 4 years ago - 2 comments

#11 - Specify database port to be used in dbConnect connection

Issue - State: closed - Opened by cmball1 about 4 years ago - 5 comments

#10 - Error with tcplVarMat using tcplLite

Issue - State: closed - Opened by paulsonak over 4 years ago - 4 comments

#9 - Update authorship?

Issue - State: closed - Opened by daynefiler over 4 years ago - 4 comments

#8 - Dose response curves

Issue - State: closed - Opened by ldecicco-USGS over 4 years ago - 2 comments

#7 - Dose response curves

Issue - State: closed - Opened by ldecicco-USGS over 4 years ago - 4 comments

#6 - [Issue #5]Update blineShift.R

Pull Request - State: closed - Opened by bselman1 over 4 years ago

#5 - blineShift bug when # of unique concentrations < 4

Issue - State: closed - Opened by bselman1 over 4 years ago - 1 comment

#4 - Updating to version 3.2 of the database

Issue - State: closed - Opened by ldecicco-USGS almost 5 years ago - 18 comments

#2 - MySQL headaches

Issue - State: closed - Opened by ldecicco-USGS over 5 years ago - 3 comments

#1 - Tiny bug: Typo in installation instructions

Issue - State: closed - Opened by anschue over 5 years ago - 1 comment