UCL-Chimera/medical-waveforms issues and pull requests

#56 - `TestArterialPressureChecks.custom_check` isn't discovered by pytest

Issue - State: open - Opened by finncatling almost 2 years ago
Labels: bug

#55 - Corrected compatible python versions

Pull Request - State: closed - Opened by finncatling almost 2 years ago

#54 - Tests do not use python versions 3.7 or 3.11

Issue - State: closed - Opened by finncatling almost 2 years ago
Labels: bug

#53 - Typo in installation instructions

Pull Request - State: closed - Opened by finncatling about 2 years ago

#52 - Typo in installation instructions

Issue - State: closed - Opened by finncatling about 2 years ago
Labels: bug, documentation

#51 - Demonstrate use of `mean_dyneg` to filter out noisy beats

Issue - State: open - Opened by finncatling about 2 years ago
Labels: documentation

#50 - Define minimal API in `init.py`

Issue - State: open - Opened by finncatling about 2 years ago
Labels: enhancement

#49 - Bump version number

Pull Request - State: closed - Opened by finncatling about 2 years ago

#48 - Bump version number

Issue - State: closed - Opened by finncatling about 2 years ago
Labels: documentation

#47 - Fix links in PyPI documentation

Pull Request - State: closed - Opened by finncatling about 2 years ago

#46 - Fix links in PyPI documentation

Issue - State: closed - Opened by finncatling about 2 years ago
Labels: documentation

#45 - Bump version number

Pull Request - State: closed - Opened by finncatling about 2 years ago

#44 - Bump version number

Issue - State: closed - Opened by finncatling about 2 years ago
Labels: documentation

#43 - Update dependencies to avoid pytest dependabot issue

Pull Request - State: closed - Opened by finncatling about 2 years ago

#42 - Update dependencies to avoid pytest dependabot issue

Issue - State: closed - Opened by finncatling about 2 years ago

#41 - Link to readme in project.toml

Pull Request - State: closed - Opened by finncatling about 2 years ago

#40 - Add licence

Issue - State: open - Opened by finncatling about 2 years ago
Labels: documentation

#39 - Link to readme in project.toml

Issue - State: closed - Opened by finncatling about 2 years ago
Labels: documentation

#38 - Installation instructions. GitHub link

Pull Request - State: closed - Opened by finncatling about 2 years ago

#37 - Add more info to `pyproject.toml`

Issue - State: closed - Opened by finncatling about 2 years ago
Labels: documentation

#36 - Add installation info to readme

Issue - State: closed - Opened by finncatling about 2 years ago
Labels: documentation

#35 - Change package name. Improved readme

Pull Request - State: closed - Opened by finncatling about 2 years ago

#34 - Introduce the package in `README.md`

Issue - State: closed - Opened by finncatling about 2 years ago
Labels: documentation

#33 - Poetry install fails for python 3.6

Issue - State: closed - Opened by finncatling about 2 years ago - 2 comments
Labels: bug

#32 - Memory-efficient `find_troughs`

Pull Request - State: closed - Opened by finncatling about 2 years ago - 1 comment

#31 - Rule based signal quality assessment

Pull Request - State: closed - Opened by finncatling over 2 years ago - 1 comment

#30 - Relative thresholds for diff quality checks

Issue - State: open - Opened by finncatling over 2 years ago
Labels: enhancement

#29 - Support `find_troughs()` for long signals with limited RAM

Issue - State: closed - Opened by finncatling over 2 years ago - 5 comments
Labels: enhancement

#28 - 11 ci enhancements

Pull Request - State: closed - Opened by JMathiszig-Lee over 2 years ago - 1 comment

#27 - Set up linting action so that code is reformatted

Issue - State: closed - Opened by finncatling over 2 years ago - 1 comment
Labels: enhancement

#26 - Detection of systole/diastole to be compatible with different waveform shapes

Issue - State: open - Opened by eliza-brown over 2 years ago - 1 comment

#25 - Updated numpy and related dependencies

Pull Request - State: closed - Opened by finncatling over 2 years ago

#24 - More dependabot alerts

Issue - State: closed - Opened by finncatling over 2 years ago

#23 - Updated to latest versions of dependencies

Pull Request - State: closed - Opened by finncatling over 2 years ago

#22 - Some dependencies outdated

Issue - State: closed - Opened by finncatling over 2 years ago

#21 - Set up testing and linting CI

Pull Request - State: closed - Opened by finncatling over 2 years ago

#20 - Set up testing and linting CI

Pull Request - State: closed - Opened by finncatling over 2 years ago - 1 comment

#19 - Ported relevant cycle feature extractors from abpfeature.m

Pull Request - State: closed - Opened by finncatling over 2 years ago

#18 - Design data structure for quality-control presets

Issue - State: closed - Opened by finncatling over 2 years ago - 3 comments
Labels: enhancement

#17 - Make waveform-level features matching those in `jSQI`

Issue - State: closed - Opened by finncatling over 2 years ago - 4 comments

#16 - `mean_dyneg` threshold should be sampling frequency independent

Issue - State: open - Opened by finncatling over 2 years ago - 2 comments
Labels: enhancement

#15 - Should `get_cycles()` be run once then given as an argument to each child of `CycleFeatureExtractor`?

Issue - State: closed - Opened by finncatling over 2 years ago - 1 comment
Labels: question

#14 - Add basic signal processing functions

Issue - State: open - Opened by sgeorge91 almost 3 years ago

#13 - Find troughs in waveforms

Pull Request - State: closed - Opened by finncatling almost 3 years ago - 1 comment

#12 - Support input DataFrame without timestamps

Issue - State: open - Opened by finncatling almost 3 years ago
Labels: enhancement

#11 - Check compatibility with python 3.6 and above

Issue - State: closed - Opened by finncatling almost 3 years ago
Labels: enhancement

#10 - Change to more informative package name

Issue - State: closed - Opened by finncatling almost 3 years ago - 1 comment
Labels: enhancement

#9 - Synthetic arterial pressure generation

Pull Request - State: closed - Opened by finncatling almost 3 years ago
Labels: enhancement

#8 - Set up CI

Issue - State: closed - Opened by finncatling almost 3 years ago - 1 comment
Labels: enhancement

#7 - Generate simple synthetic arterial waveform

Issue - State: closed - Opened by finncatling almost 3 years ago - 1 comment
Labels: enhancement

#6 - Individual functions for `BP_Tools` pulse waveform feature detection

Issue - State: closed - Opened by finncatling almost 3 years ago - 4 comments
Labels: enhancement

#5 - Nadir detection with `pyampd`

Issue - State: closed - Opened by finncatling almost 3 years ago
Labels: enhancement

#4 - Port `run_wabp.m`

Issue - State: closed - Opened by finncatling almost 3 years ago - 2 comments
Labels: enhancement

#3 - Port `BP_Tools` code

Issue - State: closed - Opened by finncatling almost 3 years ago - 1 comment
Labels: enhancement

#2 - How do we handle the timestamps in the input DataFrame?

Issue - State: closed - Opened by finncatling almost 3 years ago - 1 comment
Labels: question

#1 - Basic rule-based sanity checks for arterial blood pressure waveforms

Issue - State: closed - Opened by finncatling almost 3 years ago - 1 comment
Labels: enhancement

GitHub / UCL-Chimera/medical-waveforms issues and pull requests