Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / UC-Davis-molecular-computing/nuad issues and pull requests
#155 - Dev
Pull Request -
State: closed - Opened by dave-doty over 2 years ago
#154 - Dev
Pull Request -
State: closed - Opened by dave-doty over 2 years ago
#153 - made separate section in README for pure function explanation
Pull Request -
State: closed - Opened by dave-doty over 2 years ago
#152 - fixed docstring link
Pull Request -
State: closed - Opened by dave-doty over 2 years ago
#151 - added pairs parameter to domains_not_substrings_of_each_other_constraint
Pull Request -
State: closed - Opened by dave-doty over 2 years ago
#150 - introduced check_domain_against_itself and check_strand_against_itself for domain pair and strand pair constraints, and used it to avoid checking domain against itself with domains_not_substrings_of_each_other_domain_pair_constraint; also renamed latter to domains_not_substrings_of_each_other_constraint
Pull Request -
State: closed - Opened by dave-doty over 2 years ago
#149 - Update README.md
Pull Request -
State: closed - Opened by dave-doty almost 3 years ago
#148 - simplify API of `evaluate` function in constraint
Issue -
State: open - Opened by dave-doty almost 3 years ago
Labels: invalid, high priority
#147 - create tool that allows design to be specified and pre-packaged constraints to be picked without writing Python code
Issue -
State: open - Opened by dave-doty almost 3 years ago
Labels: enhancement
#146 - Dev
Pull Request -
State: closed - Opened by dave-doty almost 3 years ago
#145 - Fixes #144; nupack_complex_base_pair_probability_constraint falsely flags a noncompetitive domain as competitive if it appears in multiple strands
Pull Request -
State: closed - Opened by UnHumbleBen almost 3 years ago
#144 - `nupack_complex_base_pair_probability_constraint` falsely flags a noncompetitive domain as competitive if it appears in multiple strands
Issue -
State: closed - Opened by UnHumbleBen almost 3 years ago
- 1 comment
Labels: bug
#143 - Dev
Pull Request -
State: closed - Opened by dave-doty almost 3 years ago
#142 - Dev
Pull Request -
State: closed - Opened by dave-doty almost 3 years ago
#141 - Dev
Pull Request -
State: closed - Opened by dave-doty almost 3 years ago
#139 - make PyPI package that does not include NUPACK or ViennaRNA
Issue -
State: closed - Opened by dave-doty almost 3 years ago
Labels: enhancement
#138 - automated release notes
Issue -
State: closed - Opened by dave-doty almost 3 years ago
Labels: documentation, enhancement
#134 - implement `SearchParameters.report_only_violations`
Issue -
State: closed - Opened by dave-doty almost 3 years ago
Labels: enhancement, closed in dev
#133 - implement parallelism for SingularConstraints
Issue -
State: closed - Opened by dave-doty almost 3 years ago
Labels: enhancement
#124 - allow quit early optimization even when there is positive probability to keep a higher-scoring change
Issue -
State: open - Opened by dave-doty about 3 years ago
- 1 comment
Labels: enhancement
#99 - API for creating report on constraints
Issue -
State: closed - Opened by dave-doty about 3 years ago
- 1 comment
Labels: enhancement
#12 - make PyPI package with build script that includes NUPACK and ViennaRNA
Issue -
State: open - Opened by dave-doty about 4 years ago
- 1 comment
Labels: enhancement
#4 - update display text at console instead of printing
Issue -
State: closed - Opened by dave-doty about 4 years ago
- 2 comments
Labels: enhancement