Ecosyste.ms: Issues

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GitHub / TransBioInfoLab/coMethDMR issues and pull requests

#27 - Error installing package

Issue - State: open - Opened by schatterjee30 about 2 months ago

#25 - lmmTest() should support M-values and residuals in addition to beta values

Issue - State: open - Opened by gabrielodom over 2 years ago
Labels: enhancement

#24 - Better documentation

Issue - State: open - Opened by gabrielodom over 2 years ago - 5 comments
Labels: documentation

#23 - Add output warning CoMethAllRegions()

Issue - State: open - Opened by gabrielodom over 2 years ago
Labels: documentation

#22 - added website

Pull Request - State: closed - Opened by gabrielodom over 2 years ago

#21 - Error in Bioc check

Issue - State: open - Opened by gabrielodom over 2 years ago - 8 comments

#20 - Update sesame

Pull Request - State: closed - Opened by gabrielodom over 2 years ago - 1 comment

#19 - Clean up the code

Issue - State: open - Opened by gabrielodom over 2 years ago - 2 comments
Labels: bug, enhancement

#18 - Call all internal functions by argument and not position

Issue - State: closed - Opened by gabrielodom over 2 years ago - 2 comments
Labels: bug

#17 - Add better support for logical outcomes

Issue - State: open - Opened by gabrielodom over 2 years ago
Labels: enhancement

#16 - `CoMethAllRegions()` returns invisibly

Issue - State: open - Opened by gabrielodom over 2 years ago - 7 comments
Labels: bug, documentation

#15 - Better warnings for users

Issue - State: open - Opened by gabrielodom almost 3 years ago - 1 comment
Labels: documentation

#14 - Switch from sesameData:: to the Hubs

Issue - State: closed - Opened by gabrielodom almost 3 years ago - 6 comments
Labels: bug

#13 - `CoMethAllRegions()` fails on Windows

Issue - State: closed - Opened by gabrielodom almost 3 years ago
Labels: bug

#12 - Failed to bind results due to missing column

Issue - State: closed - Opened by Ning-L almost 3 years ago - 6 comments

#11 - Prelim Data Checking (NA, 0, 1)

Issue - State: closed - Opened by gabrielodom almost 3 years ago
Labels: bug

#10 - Allow to ignore strand while sorting CpGs' position

Pull Request - State: closed - Opened by Ning-L almost 3 years ago - 3 comments

#9 - OrderCpGsByLocation with ignore.strand = TRUE

Issue - State: open - Opened by Ning-L almost 3 years ago - 2 comments
Labels: enhancement

#8 - WGBS

Issue - State: open - Opened by yeduo2019 about 3 years ago - 1 comment
Labels: enhancement

#7 - Probes kept when `rdrop == 0`

Issue - State: closed - Opened by gabrielodom about 3 years ago - 6 comments
Labels: bug

#6 - R version requirement

Issue - State: closed - Opened by xwhu9 over 3 years ago - 1 comment

#5 - Package Size

Issue - State: closed - Opened by gabrielodom over 3 years ago - 1 comment
Labels: enhancement

#4 - OrderCpGsByLocation Fails for "bad" probe IDs

Issue - State: open - Opened by gabrielodom over 3 years ago - 11 comments
Labels: bug

#3 - Bioconductor Build Errors

Issue - State: closed - Opened by gabrielodom over 3 years ago - 1 comment
Labels: bug

#2 - Package Check Time

Issue - State: closed - Opened by gabrielodom over 3 years ago - 10 comments
Labels: enhancement

#1 - NOTEs for Bioconductor Submission

Issue - State: closed - Opened by gabrielodom over 3 years ago - 10 comments