TileDB-Inc/TileDB-BioImaging issues and pull requests

#143 - Experimental reader dimension detection hotfix

Pull Request - State: closed - Opened by XanthosXanthopoulos 21 days ago

#142 - Fix test coverage badge

Pull Request - State: closed - Opened by ktsitsi about 1 month ago

#141 - Fixing condition for test coverage badge

Pull Request - State: closed - Opened by ktsitsi about 1 month ago

#140 - Adding a metadata flag for signaling successful ingestion

Pull Request - State: closed - Opened by ktsitsi about 1 month ago

#139 - Support for biomedical image formats NIFTI

Pull Request - State: open - Opened by ktsitsi about 2 months ago

#138 - Add Prereq to install OpenSlide to README

Pull Request - State: closed - Opened by spencerseale 2 months ago - 2 comments

#137 - Exported images fail to render in qupath

Pull Request - State: closed - Opened by ktsitsi 2 months ago

#136 - Support ingestion of PNG images

Pull Request - State: closed - Opened by ktsitsi 3 months ago

#135 - Wrap array_exists with tiledb scope

Pull Request - State: closed - Opened by ktsitsi 4 months ago

#134 - Support source dest configs ingestion

Pull Request - State: closed - Opened by ktsitsi 4 months ago

#133 - Convert ABC base classes to Protocols

Pull Request - State: closed - Opened by ktsitsi 4 months ago - 3 comments

#132 - VFS pushdown to exportation

Pull Request - State: closed - Opened by ktsitsi 5 months ago - 1 comment

#131 - Change Openslide Drive Path for Windows

Pull Request - State: closed - Opened by ktsitsi 5 months ago

#130 - Remove pinned scikit since 0.24.0 was released

Pull Request - State: closed - Opened by ktsitsi 5 months ago - 1 comment

#129 - Validating ingestion of levels to make ingestion idempotent

Pull Request - State: closed - Opened by ktsitsi 5 months ago

#128 - Pinning scikit-image in Bioimg CI

Pull Request - State: closed - Opened by ktsitsi 5 months ago

#127 - Update README.md

Pull Request - State: closed - Opened by ihnorton 6 months ago

#126 - Try to fix redirect

Pull Request - State: closed - Opened by ihnorton 6 months ago

#125 - Fixing API dependencies guards and tiledb-cloud warning

Pull Request - State: closed - Opened by ktsitsi 6 months ago

#124 - Automate DOC generation with quartodoc and quarto

Pull Request - State: closed - Opened by ktsitsi 6 months ago

#123 - Pushing VFS down to converters

Pull Request - State: closed - Opened by ktsitsi 6 months ago

#122 - Fix ome-zarr channels metadata access

Pull Request - State: closed - Opened by ktsitsi 6 months ago

#121 - Update dataset type early to avoid misregistration as simple Group

Pull Request - State: closed - Opened by ktsitsi 6 months ago

#120 - Memory layout optimized TIFF reader

Pull Request - State: closed - Opened by XanthosXanthopoulos 7 months ago

#119 - Add jsonpickle to base dependencies

Pull Request - State: closed - Opened by ktsitsi 8 months ago - 2 comments

#118 - Add error for incomplete ingestion of previous image

Pull Request - State: closed - Opened by ktsitsi 8 months ago

#117 - Python version in CI, no-edit mode for installed dependencies

Pull Request - State: closed - Opened by ktsitsi 9 months ago

#116 - readme zsh clarification

Pull Request - State: closed - Opened by kounelisagis 9 months ago

#115 - Fix duplicate channel ID

Pull Request - State: closed - Opened by XanthosXanthopoulos 9 months ago

#114 - Fix duplicate channel ID

Pull Request - State: closed - Opened by XanthosXanthopoulos 9 months ago

#113 - Tiled writes during ingestion

Pull Request - State: closed - Opened by XanthosXanthopoulos 9 months ago - 2 comments

#112 - Axes object enrichment to meet NGFF Spec (WIP)

Pull Request - State: open - Opened by ktsitsi 9 months ago - 1 comment

#111 - Fix setup_python

Pull Request - State: closed - Opened by ktsitsi 10 months ago

#110 - Adding setuptools dependency

Pull Request - State: closed - Opened by ktsitsi 10 months ago

#109 - Upgrading setup-python

Pull Request - State: closed - Opened by ktsitsi 10 months ago

#108 - Changing dataset type from uppercase to lowercase bioimg

Pull Request - State: closed - Opened by ktsitsi 10 months ago

#107 - Export OME-NGFF metadata

Pull Request - State: open - Opened by XanthosXanthopoulos 10 months ago

#106 - Exclude metadata from ingestion

Pull Request - State: closed - Opened by ktsitsi 12 months ago - 6 comments

#105 - Logger for tiledb-bioimg

Pull Request - State: closed - Opened by ktsitsi about 1 year ago - 1 comment

#104 - Update tifffile version and unpin

Pull Request - State: closed - Opened by ktsitsi about 1 year ago - 1 comment