Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / TheoreticalEcology/s-jSDM issues and pull requests
#149 - Unable to scale negative R squareds
Issue -
State: open - Opened by 1circle about 1 month ago
- 1 comment
#148 - Helpupdates2024
Pull Request -
State: closed - Opened by MaximilianPi 2 months ago
#147 - Bias in sjSDM::linear() coefficient estimates when including an intercept term.
Issue -
State: closed - Opened by mintzj 3 months ago
- 3 comments
#146 - Internal structure set negative R2 to 0 or scale
Issue -
State: open - Opened by florianhartig 3 months ago
#145 - Exact VP definition
Issue -
State: open - Opened by florianhartig 4 months ago
- 1 comment
#144 - importance
Issue -
State: closed - Opened by florianhartig 4 months ago
#143 - plotsjSDMcoef returns summary table / summary can't run invisible
Issue -
State: open - Opened by florianhartig 4 months ago
#142 - Readme Files
Issue -
State: closed - Opened by florianhartig 4 months ago
#142 - Readme Files
Issue -
State: open - Opened by florianhartig 4 months ago
#141 - Failing to run models on GPU
Issue -
State: open - Opened by edstowe 4 months ago
#141 - Failing to run models on GPU
Issue -
State: open - Opened by edstowe 4 months ago
#140 - Installation error
Issue -
State: closed - Opened by ManuelSpinola 4 months ago
- 5 comments
#139 - sjSDM - memory issues of anova()
Issue -
State: open - Opened by florianhartig 6 months ago
- 6 comments
#138 - sjSDM on a remote server
Issue -
State: open - Opened by Loic-sanchez 6 months ago
- 3 comments
#137 - vp codist
Issue -
State: open - Opened by MaximilianPi 7 months ago
#136 - ValueError: Expected value argument
Issue -
State: open - Opened by Sarahbouclette 7 months ago
- 3 comments
#135 - Random factors
Issue -
State: open - Opened by fetafretka 8 months ago
- 19 comments
#134 - ValueError: Expected parameter rate
Issue -
State: closed - Opened by fetafretka 8 months ago
- 4 comments
#133 - Is there a way to assess the significance (p-value?) of pairwise relationships in species associations?
Issue -
State: closed - Opened by CaiWang0503 9 months ago
- 2 comments
#132 - PyTorch not installed
Issue -
State: closed - Opened by yang963469904 about 1 year ago
- 13 comments
#131 - Error in sjSDM_cv
Issue -
State: open - Opened by YJ781 about 1 year ago
- 8 comments
#130 - Problem with installation
Issue -
State: open - Opened by niming2 about 1 year ago
- 1 comment
#129 - VENN diagram Anova
Issue -
State: closed - Opened by agnes-duhamet about 1 year ago
- 1 comment
#128 - CRAN Issue
Issue -
State: open - Opened by MaximilianPi about 1 year ago
#127 - Question about bioticStruct() and generating Single Species SDMs from sjSDM
Issue -
State: open - Opened by dansmi-hub about 1 year ago
- 4 comments
#126 - Negative Binomial Throws an error in tuning
Issue -
State: open - Opened by metagenAu about 1 year ago
- 1 comment
#125 - Installation on hpc
Issue -
State: closed - Opened by YJ781 about 1 year ago
- 6 comments
#124 - Species-level predictors?
Issue -
State: open - Opened by fbkarsdorp over 1 year ago
- 4 comments
#123 - plotInternalStructure error
Issue -
State: closed - Opened by agnes-duhamet over 1 year ago
- 4 comments
#122 - offset
Issue -
State: open - Opened by MaximilianPi over 1 year ago
Labels: enhancement
#121 - Error when predicting to new data - error: Error : torch._C._LinAlgError: linalg.inv: The diagonal element 3 is zero
Issue -
State: closed - Opened by agnes-duhamet over 1 year ago
- 4 comments
#120 - Shared contributions in ANOVA
Issue -
State: open - Opened by wevertonbio over 1 year ago
- 4 comments
#119 - Error : torch._C._LinAlgError
Issue -
State: open - Opened by agnes-duhamet over 1 year ago
- 3 comments
#118 - plotInternalStructure: there is no package called ‘ggplodt2’
Issue -
State: closed - Opened by wevertonbio over 1 year ago
- 1 comment
#117 - Scale of predicted results and questions about tuning
Issue -
State: open - Opened by YJ781 over 1 year ago
- 3 comments
#116 - Error: object 'torch' not found in the example Pichler and Hartig- 2020
Issue -
State: closed - Opened by YJ781 over 1 year ago
- 2 comments
#115 - Bug: plot.sjSDM doesnt work for species with whitespace
Issue -
State: closed - Opened by dansmi-hub over 1 year ago
- 1 comment
#114 - Easy Model Residuals
Issue -
State: open - Opened by dansmi-hub over 1 year ago
- 1 comment
#113 - Different R2 produced for Model and Anova
Issue -
State: closed - Opened by AndrewCSlater over 1 year ago
- 1 comment
#112 - Error in py_call_impl(callable, dots$args, dots$keywords) : torch._C._LinAlgError: linalg.inv: The diagonal element 1 is zero
Issue -
State: closed - Opened by Samyar1400 almost 2 years ago
- 1 comment
#111 - Error/; Error in py_call_impl(callable, dots$args, dots$keywords) : AssertionError: Size mismatch between tensors
Issue -
State: closed - Opened by Samyar1400 almost 2 years ago
- 1 comment
#110 - generateSpatialEV improve documentation
Issue -
State: closed - Opened by MaximilianPi almost 2 years ago
- 1 comment
#109 - Adding spatial component reduces R2 of model
Issue -
State: closed - Opened by AndrewCSlater almost 2 years ago
- 3 comments
#108 - Time as "spatial" variable
Issue -
State: open - Opened by Zurapiti almost 2 years ago
- 14 comments
Labels: enhancement
#107 - PyTorch not loading
Issue -
State: closed - Opened by AndrewCSlater almost 2 years ago
- 6 comments
#106 - Co-occurrence matrix based on residual associations
Issue -
State: closed - Opened by wevertonbio about 2 years ago
- 1 comment
#105 - #104
Pull Request -
State: closed - Opened by MaximilianPi about 2 years ago
#104 - incorrect mean evaluation metrics in short_summary from sjSDM_cv.R ?
Issue -
State: closed - Opened by Cdevenish about 2 years ago
- 1 comment
Labels: bug
#103 - Categorical enviornmental variables
Issue -
State: closed - Opened by LuziaThea about 2 years ago
- 2 comments
#102 - Cannot reference package in RStudio on Ubuntu 22.04
Issue -
State: open - Opened by kjmtaylor22 over 2 years ago
- 9 comments
#101 - Question: importance() x anova()
Issue -
State: open - Opened by wevertonbio over 2 years ago
- 4 comments
Labels: enhancement
#100 - sjsdm_cv Gpu not enabled
Issue -
State: closed - Opened by CaiWang0503 over 2 years ago
- 4 comments
#99 - new feature gradient plots
Issue -
State: open - Opened by MaximilianPi over 2 years ago
- 5 comments
Labels: enhancement
#98 - fix plot bug
Pull Request -
State: closed - Opened by MaximilianPi over 2 years ago
#97 - plot bug
Issue -
State: closed - Opened by MaximilianPi over 2 years ago
Labels: bug
#96 - licence
Issue -
State: closed - Opened by dougwyu over 2 years ago
- 2 comments
#95 - posterior probabilities
Issue -
State: closed - Opened by mdayii over 2 years ago
- 1 comment
#94 - Error: 'presences' must be less than or equal to 'trials'. Error: Please respecify and call jSDM_probit_block() again.
Issue -
State: closed - Opened by mdayii over 2 years ago
- 1 comment
#93 - Devel branch intercept argument not found
Issue -
State: closed - Opened by MaximilianPi over 2 years ago
- 1 comment
#92 - installation on M1 Pro Mac
Issue -
State: closed - Opened by dougwyu over 2 years ago
- 4 comments
#91 - CRAN 1.0.1
Issue -
State: closed - Opened by MaximilianPi over 2 years ago
#90 - Rsquared()
Issue -
State: closed - Opened by mtva0001 over 2 years ago
- 11 comments
#89 - v1.0.1
Pull Request -
State: closed - Opened by MaximilianPi over 2 years ago
#88 - error in function sjSDM.tune
Issue -
State: closed - Opened by mtva0001 over 2 years ago
- 3 comments
Labels: bug
#87 - Revised documentation and global variables
Pull Request -
State: closed - Opened by MaximilianPi over 2 years ago
#86 - V1.0.0
Pull Request -
State: closed - Opened by MaximilianPi over 2 years ago
#85 - installation / sLVM is deprecated / improved stability
Pull Request -
State: closed - Opened by MaximilianPi almost 3 years ago
#84 - Improve memory efficiency of hyper-parameter sampling
Issue -
State: closed - Opened by florianhartig almost 3 years ago
- 4 comments
Labels: enhancement
#83 - Regularization - parameter selection
Issue -
State: open - Opened by mtva0001 almost 3 years ago
- 6 comments
Labels: question
#82 - Output for species-species correlation matrix
Issue -
State: closed - Opened by Zinco-Li almost 3 years ago
#81 - Dependencies not found for windows
Issue -
State: closed - Opened by Zinco-Li almost 3 years ago
- 1 comment
Labels: bug
#80 - Arguments for call are not valid. (torch.tensordot)
Issue -
State: closed - Opened by benjamindeneu almost 3 years ago
- 2 comments
#79 - Error: PyTorch not installed
Issue -
State: closed - Opened by lucaz88 almost 3 years ago
- 2 comments
Labels: question
#78 - installation error in macOS
Issue -
State: closed - Opened by dougwyu about 3 years ago
- 10 comments
#77 - RuntimeError
Issue -
State: closed - Opened by drhammed about 3 years ago
- 4 comments
#76 - reference for importance() / documentation of variation partitioning in general
Issue -
State: open - Opened by florianhartig about 3 years ago
- 2 comments
#75 - Citation update?
Issue -
State: closed - Opened by florianhartig about 3 years ago
- 1 comment
#74 - How to improve GPU utilisation - how to parallelise over GPUs
Issue -
State: open - Opened by MaximilianPi about 3 years ago
Labels: question
#73 - Importance, R^2 and p-values for single env predictors.
Issue -
State: closed - Opened by JulFrey about 3 years ago
- 3 comments
Labels: enhancement
#72 - Migrating sjSDM code to AWS
Issue -
State: closed - Opened by adrian-v-m over 3 years ago
- 29 comments
Labels: bug, enhancement, installation help
#71 - dependency installation issue in 0.1.8 - missing madgrad
Issue -
State: closed - Opened by kjmtaylor22 over 3 years ago
- 4 comments
Labels: installation help
#70 - use einsum instead of tensordot
Pull Request -
State: closed - Opened by MaximilianPi over 3 years ago
#69 - test can't run in 0.1.8
Issue -
State: closed - Opened by CaiWang0503 over 3 years ago
- 2 comments
Labels: bug
#68 - add plotsjSDMcoef
Pull Request -
State: closed - Opened by CaiWang0503 over 3 years ago
- 4 comments
#67 - CPU dtype="float64" error
Issue -
State: closed - Opened by MaximilianPi over 3 years ago
- 1 comment
Labels: bug
#66 - CPU dtype=
Issue -
State: closed - Opened by MaximilianPi over 3 years ago
#65 - importance and other new features
Pull Request -
State: closed - Opened by MaximilianPi over 3 years ago
#64 - Memory problems for importance() with large covariances
Issue -
State: closed - Opened by florianhartig over 3 years ago
- 2 comments
#63 - multiple gpu when running 'sjSDM'
Issue -
State: closed - Opened by chnpenny over 3 years ago
- 1 comment
#62 - install to google colab / kaggle
Issue -
State: open - Opened by chnpenny over 3 years ago
- 4 comments
Labels: question
#61 - linear() doesn't accept formula as object
Issue -
State: closed - Opened by Cdevenish over 3 years ago
- 2 comments
Labels: bug
#60 - fix: macos installation
Pull Request -
State: closed - Opened by MaximilianPi over 3 years ago
#59 - :rocket: Adding bias to DNN module
Pull Request -
State: closed - Opened by MaximilianPi over 3 years ago
#58 - Phylogeny
Issue -
State: open - Opened by MaximilianPi almost 4 years ago
- 3 comments
Labels: enhancement, future
#57 - nn.Sequential to DNN()
Issue -
State: closed - Opened by MaximilianPi almost 4 years ago
Labels: enhancement, future
#56 - dropout and clean up
Pull Request -
State: closed - Opened by MaximilianPi almost 4 years ago
#55 - New version:
Pull Request -
State: closed - Opened by MaximilianPi almost 4 years ago
#54 - Different families
Pull Request -
State: closed - Opened by MaximilianPi about 4 years ago
#53 - summary how to display the covariance/correlation matrix
Issue -
State: closed - Opened by MaximilianPi about 4 years ago
- 4 comments
Labels: enhancement
#52 - Regularization
Pull Request -
State: closed - Opened by MaximilianPi about 4 years ago