Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / SysBioInra/RBApy issues and pull requests
#40 - Update test_cli.py
Pull Request -
State: closed - Opened by obodeit almost 2 years ago
#39 - Added sample_input_small directory with B.subtilis information
Pull Request -
State: closed - Opened by AnneGoelzer almost 2 years ago
#38 - Merge branch Verbose test in master
Pull Request -
State: closed - Opened by AnneGoelzer almost 2 years ago
#37 - test issue
Issue -
State: open - Opened by obodeit almost 2 years ago
#36 - Add Swiglpk solver
Pull Request -
State: closed - Opened by AnneGoelzer about 2 years ago
#35 - Fix uniprot import
Pull Request -
State: closed - Opened by AnneGoelzer about 2 years ago
- 1 comment
#34 - Please add some sample files
Issue -
State: open - Opened by cilamitour about 2 years ago
#33 - change indents in sbml_data.py from tabs to spaces
Pull Request -
State: closed - Opened by obodeit almost 3 years ago
#32 - Add unit tests
Issue -
State: open - Opened by jonrkarr about 3 years ago
#31 - Add options to control bissection tolerance, maximum number of iterations
Issue -
State: closed - Opened by jonrkarr about 3 years ago
#30 - Various improvements
Pull Request -
State: closed - Opened by jonrkarr about 3 years ago
- 1 comment
#29 - Handle exceptions more conventionally
Issue -
State: closed - Opened by jonrkarr about 3 years ago
#28 - Handle warnings more conventionally
Issue -
State: closed - Opened by jonrkarr about 3 years ago
#27 - Fix typos on capitalization of UniProt
Issue -
State: closed - Opened by jonrkarr about 3 years ago
#26 - Add options to control verbosity
Issue -
State: closed - Opened by jonrkarr about 3 years ago
#25 - Add ability to execute simulations with a free solver such as GLPK
Issue -
State: closed - Opened by jonrkarr about 3 years ago
#24 - Unit tests appear to be outdated
Issue -
State: open - Opened by jonrkarr about 3 years ago
#23 - Add missing NumPy requirement to `setup.py`
Issue -
State: closed - Opened by jonrkarr about 3 years ago
#22 - Provide inline documentation for command-line programs
Issue -
State: closed - Opened by jonrkarr about 3 years ago
#21 - Add a version attribute to the `rba` module
Issue -
State: closed - Opened by jonrkarr about 3 years ago
#20 - Align the version tags in GitHub and `setup.py`
Issue -
State: open - Opened by jonrkarr about 3 years ago
#19 - Use `setup.py` to simplify the installation of the generate and solve scripts.
Issue -
State: closed - Opened by jonrkarr about 3 years ago
#18 - Improve compatibility of `setup.py` with PyPI
Issue -
State: closed - Opened by jonrkarr about 3 years ago
#17 - Distribute through PyPI
Issue -
State: closed - Opened by jonrkarr about 3 years ago
#16 - Update requirement to recent version of SciPy
Issue -
State: closed - Opened by jonrkarr about 3 years ago
#15 - Medium definition seems to be ignored
Issue -
State: open - Opened by Midnighter over 3 years ago
#14 - Problems with gene product associations
Issue -
State: open - Opened by Midnighter over 3 years ago
#13 - refactor: modify messages, add reaction ID
Pull Request -
State: closed - Opened by Midnighter over 3 years ago
#12 - Small fixes necessary
Issue -
State: open - Opened by liebermeister almost 4 years ago
#11 - Error when trying to install RBApy for python3
Issue -
State: open - Opened by liebermeister almost 4 years ago
- 1 comment
#10 - Error when running generate_rba_model.py on example model
Issue -
State: closed - Opened by liebermeister almost 4 years ago
- 4 comments
#9 - How to add proteins for new processes
Issue -
State: closed - Opened by m-jahn over 4 years ago
- 3 comments
#8 - parsing of enzyme subunits from SBML model does not work
Issue -
State: closed - Opened by m-jahn over 4 years ago
- 1 comment
#7 - functions in rba/estim seem outdated
Issue -
State: open - Opened by m-jahn over 4 years ago
- 3 comments
#6 - fixes 1 bug with import of SBML level 3 models, and adds tsv to write_fluxes()
Pull Request -
State: closed - Opened by m-jahn over 4 years ago
- 1 comment
#5 - gene names from SBML don't match uniprot because of prefix
Issue -
State: closed - Opened by m-jahn over 4 years ago
- 8 comments
#4 - Update setup.py
Pull Request -
State: closed - Opened by AlexMart1 over 4 years ago
#3 - Indexing bug still persists
Issue -
State: closed - Opened by AlexMart1 over 4 years ago
- 1 comment
#2 - Instructions to install cplex discontinued in website
Issue -
State: closed - Opened by AlexMart1 over 4 years ago
- 2 comments
#1 - List dependencies in Readme/manual
Issue -
State: open - Opened by m-jahn over 4 years ago