Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / SynBioDex/pySBOL2 issues and pull requests
#440 - Unable to create SequenceConstraint objects
Issue -
State: open - Opened by PrashantVaidyanathan 18 days ago
#439 - Java Validation error when creating an interaction and adding it to a document with pySBOL2
Issue -
State: closed - Opened by manulera 6 months ago
- 4 comments
Labels: question
#438 - Remove functionalComponents property from Interaction
Issue -
State: open - Opened by manulera 6 months ago
- 2 comments
Labels: bug
#437 - Adding Interaction to ComponentDefinition
Issue -
State: open - Opened by manulera 6 months ago
- 1 comment
Labels: question
#436 - closes #430
Pull Request -
State: open - Opened by manulera 6 months ago
- 1 comment
#435 - fix style
Pull Request -
State: closed - Opened by manulera 6 months ago
- 1 comment
#434 - Improve style
Pull Request -
State: closed - Opened by jakebeal 6 months ago
#433 - Add github action that runs unittest and linter
Issue -
State: open - Opened by manulera 6 months ago
- 1 comment
Labels: enhancement
#432 - update contributing with submodule test folder info
Pull Request -
State: closed - Opened by manulera 6 months ago
- 1 comment
#431 - closes #430
Pull Request -
State: closed - Opened by manulera 6 months ago
- 1 comment
#430 - Bug in ReferencedObject::__init__
Issue -
State: open - Opened by manulera 6 months ago
- 2 comments
#429 - Activity.endedAtTime appears to note recognize datetime objects
Issue -
State: open - Opened by jakebeal 12 months ago
Labels: bug
#428 - Activity.types has wrong cardinality
Issue -
State: open - Opened by jakebeal 12 months ago
Labels: bug
#427 - Use `Graph.parse` instead of `Graph.load`
Pull Request -
State: closed - Opened by tcmitchell about 2 years ago
#426 - pySBOL2 unit tests are not compatible with RDFlib 6.2
Issue -
State: closed - Opened by tcmitchell about 2 years ago
- 1 comment
#425 - Increase python version coverage
Pull Request -
State: closed - Opened by tcmitchell over 2 years ago
#424 - Update python-package.yml
Pull Request -
State: closed - Opened by jakebeal over 2 years ago
#423 - Functional Components
Issue -
State: closed - Opened by JMante1 over 2 years ago
- 8 comments
Labels: bug
#422 - Modules
Issue -
State: closed - Opened by JMante1 over 2 years ago
- 2 comments
#421 - Bump version to 1.5
Pull Request -
State: closed - Opened by tcmitchell over 2 years ago
#420 - Prep release 1.4.1
Pull Request -
State: closed - Opened by tcmitchell over 2 years ago
#419 - Change JAVA path to update pysbol2 conda package
Issue -
State: closed - Opened by kenza12 over 2 years ago
#418 - Change JAVA path to update pysbol2 conda package
Pull Request -
State: closed - Opened by kenza12 over 2 years ago
- 3 comments
#417 - Update pysbol2 conda package
Issue -
State: closed - Opened by kenza12 over 2 years ago
- 6 comments
#416 - Bump version for development
Pull Request -
State: closed - Opened by jakebeal over 2 years ago
#415 - Update offline converter JAR
Pull Request -
State: closed - Opened by jakebeal over 2 years ago
#414 - Offline validation conversion
Pull Request -
State: closed - Opened by jakebeal over 2 years ago
#413 - Copy function doesn't remap namespaces as expected, breaks links
Issue -
State: open - Opened by jakebeal over 2 years ago
Labels: bug
#412 - Combinatorial Derivations Have some issues
Issue -
State: open - Opened by JMante1 almost 3 years ago
- 1 comment
#411 - Solving override issue
Pull Request -
State: closed - Opened by JMante1 almost 3 years ago
- 3 comments
#410 - Experimental Data is owned object?
Issue -
State: closed - Opened by JMante1 almost 3 years ago
- 1 comment
#409 - old pysbol repo: add tag to the latest commit
Issue -
State: closed - Opened by kenza12 almost 3 years ago
- 10 comments
#408 - Debug messages yield TypeErrors
Issue -
State: open - Opened by tcmitchell about 3 years ago
- 1 comment
#407 - Bump version to 1.4
Pull Request -
State: closed - Opened by tcmitchell about 3 years ago
#406 - Prevent failing build jobs from canceling other jobs
Pull Request -
State: closed - Opened by tcmitchell about 3 years ago
#405 - Stop writing a temp file
Pull Request -
State: closed - Opened by tcmitchell about 3 years ago
#404 - Switch to GitHub Actions
Pull Request -
State: closed - Opened by tcmitchell about 3 years ago
#403 - Fix interpretation of format conversion results
Pull Request -
State: closed - Opened by tcmitchell about 3 years ago
#402 - Don't create genbank2sbol.json file in working directory
Issue -
State: closed - Opened by jakebeal about 3 years ago
Labels: bug
#401 - Validator errors on empty document
Issue -
State: closed - Opened by jakebeal about 3 years ago
- 2 comments
#400 - SBOL Output as XML
Issue -
State: closed - Opened by JMante1 over 3 years ago
- 6 comments
#399 - Retain referenced objects on copy
Pull Request -
State: closed - Opened by tcmitchell over 3 years ago
#398 - Copy Function Changes Namespace for Sub-Component Definition
Issue -
State: open - Opened by nroehner over 3 years ago
- 1 comment
#397 - Copy Function Drops Definition for Sub-Component
Issue -
State: closed - Opened by nroehner over 3 years ago
- 1 comment
#396 - release of pySBOL2 as a conda package?
Issue -
State: open - Opened by tduigou over 3 years ago
- 10 comments
#395 - PythonicInterface class is missing
Issue -
State: closed - Opened by tcmitchell over 3 years ago
- 1 comment
#394 - PartShop.submit fails when document.displayId has no value
Issue -
State: open - Opened by tramyn almost 4 years ago
Labels: bug
#393 - Request: Explain OwnedObject in docs
Issue -
State: open - Opened by rpgoldman almost 4 years ago
#392 - Support PartShop.exists() in library
Issue -
State: open - Opened by tramyn almost 4 years ago
Labels: enhancement
#391 - Remove Utah user/pass
Pull Request -
State: closed - Opened by tcmitchell almost 4 years ago
#390 - Remove dependence on Utah SynBioHub servers
Issue -
State: closed - Opened by tcmitchell almost 4 years ago
#389 - Bump version to 1.3
Pull Request -
State: closed - Opened by tcmitchell almost 4 years ago
#388 - Add variable component unit testing
Pull Request -
State: closed - Opened by tcmitchell about 4 years ago
#387 - Fix variable component
Pull Request -
State: closed - Opened by HM00 about 4 years ago
- 1 comment
#386 - Typo in default repeat value of VariableComponent class constructor
Issue -
State: closed - Opened by ImperialiGEM2020 about 4 years ago
- 1 comment
#385 - VariableComponent objects not created
Issue -
State: closed - Opened by ImperialiGEM2020 about 4 years ago
- 2 comments
#384 - Adding components to collections
Issue -
State: closed - Opened by IsabelMarleen about 4 years ago
- 4 comments
#383 - Sequence Ontology resolution
Issue -
State: closed - Opened by dr3y about 4 years ago
- 3 comments
#382 - Milliseconds are dropped from dateTime
Issue -
State: open - Opened by tcmitchell about 4 years ago
- 1 comment
#381 - Data types are not being written on serialization
Issue -
State: open - Opened by tcmitchell about 4 years ago
- 4 comments
#380 - creating an SBOL design with backwards parts
Issue -
State: closed - Opened by dr3y about 4 years ago
- 6 comments
#379 - Bump version to 1.2
Pull Request -
State: closed - Opened by tcmitchell about 4 years ago
#378 - Composite Part Assembly with no defined assembly method
Issue -
State: closed - Opened by IsabelMarleen about 4 years ago
- 19 comments
#377 - Implement downloadAttachment
Pull Request -
State: closed - Opened by bbartley about 4 years ago
#376 - Update to latest SBOLTestSuite
Pull Request -
State: closed - Opened by tcmitchell about 4 years ago
#375 - Add a better recursive comparison test
Pull Request -
State: closed - Opened by tcmitchell about 4 years ago
#374 - Add Document.importFromFormat
Pull Request -
State: closed - Opened by tcmitchell about 4 years ago
#373 - Control how Document.append merges and/or overwrites
Pull Request -
State: closed - Opened by tcmitchell about 4 years ago
#372 - PartShop.pullCollection
Issue -
State: closed - Opened by JoshuaUrrutia about 4 years ago
- 4 comments
#371 - Make Document.readString() clear the Document
Pull Request -
State: closed - Opened by tcmitchell about 4 years ago
#370 - Add part shop login example
Pull Request -
State: closed - Opened by tcmitchell about 4 years ago
#369 - Update extensions documentation
Pull Request -
State: closed - Opened by bbartley about 4 years ago
- 1 comment
#368 - Extension ownership relationships are not restored properly
Issue -
State: open - Opened by tcmitchell about 4 years ago
- 2 comments
#367 - Mark Config.register_extension_class as a @staticmethod
Pull Request -
State: closed - Opened by tcmitchell about 4 years ago
#366 - Clear out the document in append
Pull Request -
State: closed - Opened by tcmitchell about 4 years ago
#365 - Travis build improvements
Pull Request -
State: closed - Opened by tcmitchell about 4 years ago
#364 - Implement PartShop.downloadAttachment
Issue -
State: closed - Opened by JoshuaUrrutia about 4 years ago
- 3 comments
#363 - Add login example to docs
Issue -
State: closed - Opened by JoshuaUrrutia about 4 years ago
#362 - Merging of Documents with `append` is broken
Issue -
State: closed - Opened by bbartley about 4 years ago
- 1 comment
#361 - Bump version to 1.1
Pull Request -
State: closed - Opened by tcmitchell about 4 years ago
#360 - Allow use of Raptor
Issue -
State: open - Opened by jakebeal about 4 years ago
#359 - Write unit test for `append`
Issue -
State: closed - Opened by bbartley about 4 years ago
- 1 comment
#358 - Round-trip is not idempotent
Issue -
State: closed - Opened by bbartley about 4 years ago
- 4 comments
#357 - Document how to use PyPy with pySBOL2
Pull Request -
State: closed - Opened by tcmitchell about 4 years ago
#356 - Improve installation instructions
Pull Request -
State: closed - Opened by tcmitchell about 4 years ago
#355 - Allow math.inf for property upper bound
Pull Request -
State: closed - Opened by tcmitchell about 4 years ago
#354 - Properties do not accept math.inf as an upper bound
Issue -
State: closed - Opened by tcmitchell about 4 years ago
#353 - 350 register ownership predicates
Pull Request -
State: closed - Opened by bbartley about 4 years ago
- 1 comment
#352 - Fix SBOLError calling order
Pull Request -
State: closed - Opened by tcmitchell about 4 years ago
#351 - Add docs for SBOL extensions
Pull Request -
State: closed - Opened by bbartley about 4 years ago
#350 - Parent-child extensions are not serialized properly
Issue -
State: closed - Opened by bbartley about 4 years ago
- 1 comment
#349 - Migrate more to synbiohub.org for testing
Pull Request -
State: closed - Opened by tcmitchell about 4 years ago
#348 - Bump version to 1.0
Pull Request -
State: closed - Opened by tcmitchell about 4 years ago
#347 - Allow integer bounds on properties
Pull Request -
State: closed - Opened by tcmitchell about 4 years ago
#345 - Error in OwnedObject.set: object is not iterable
Issue -
State: closed - Opened by bbartley about 4 years ago
- 2 comments
#338 - 320 register extension class
Pull Request -
State: closed - Opened by bbartley about 4 years ago
#329 - Implement Document.importFromFormat
Issue -
State: closed - Opened by tcmitchell over 4 years ago
#310 - Implement Analysis, Build, Design
Issue -
State: open - Opened by tcmitchell over 4 years ago
#279 - Investigate using PyPy
Issue -
State: closed - Opened by tcmitchell over 4 years ago
- 2 comments
#263 - Add cross-links and Table of Contents to the API section of the docs
Issue -
State: open - Opened by rpgoldman over 4 years ago