Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / SynBioDex/SBOL-utilities issues and pull requests

#303 - WIP fix-CI

Pull Request - State: open - Opened by bbartley 4 days ago

#302 - `Removed AI project files and demo subprojects`

Pull Request - State: open - Opened by sriramsowmithri9807 12 days ago

#300 - File not found error in validator call in sbol3 to 2 conversion

Issue - State: open - Opened by JMante1 5 months ago - 6 comments

#299 - SBOL 2-3 converter - Collection (Priority 1)

Issue - State: open - Opened by Yehuda-Binik 5 months ago - 1 comment
Labels: enhancement

#298 - SBOL 2-3 converter - Implementation (Priority 1)

Issue - State: closed - Opened by Yehuda-Binik 5 months ago

#297 - SBOL 2-3 converter - Participation (Priority 2)

Issue - State: open - Opened by Yehuda-Binik 5 months ago
Labels: enhancement

#296 - SBOL 2-3 converter - Interaction (Priority 2)

Issue - State: open - Opened by Yehuda-Binik 5 months ago
Labels: enhancement

#294 - SBOL 2-3 converter - Module (Priority 3)

Issue - State: open - Opened by Yehuda-Binik 5 months ago
Labels: enhancement

#292 - SBOL 2-3 converter - Sequence_constraint (Priority 2)

Issue - State: open - Opened by Yehuda-Binik 5 months ago
Labels: enhancement

#291 - SBOL 2-3 converter - Generic_location (Priority 3)

Issue - State: open - Opened by Yehuda-Binik 5 months ago
Labels: enhancement

#290 - SBOL 2-3 converter - Cut (Priority 2)

Issue - State: open - Opened by Yehuda-Binik 5 months ago
Labels: enhancement

#289 - SBOL 2-3 converter - Range (Priority 2)

Issue - State: open - Opened by Yehuda-Binik 5 months ago
Labels: enhancement

#288 - SBOL 2-3 converter - Component_definition

Issue - State: open - Opened by Yehuda-Binik 6 months ago
Labels: enhancement

#287 - SBOL 2 to 3 Converter: owned object identities

Issue - State: open - Opened by fxbuson 6 months ago - 1 comment
Labels: help wanted

#286 - SBOL 2-3 converter - Component

Issue - State: open - Opened by Yehuda-Binik 6 months ago
Labels: enhancement

#285 - handle None namespace and version suffix in conversion

Pull Request - State: open - Opened by fxbuson 6 months ago - 1 comment
Labels: bug

#283 - SBOL 2 to 3 Converter: Empty ComponentDefinition conversion

Issue - State: open - Opened by fxbuson 6 months ago - 2 comments
Labels: bug

#282 - Implemented working prototype of 3.X sub_component <---> 2.X component conversion

Pull Request - State: open - Opened by Yehuda-Binik 6 months ago
Labels: enhancement

#281 - SBOL 2-3 converter - Maps_to (Priority 3)

Issue - State: open - Opened by Gonza10V 7 months ago
Labels: enhancement

#280 - SBOL 2-3 converter - Usage (Priority 4)

Issue - State: open - Opened by Gonza10V 7 months ago
Labels: enhancement

#279 - SBOL 2-3 converter - Unit_multiplication (Priority 4)

Issue - State: open - Opened by Gonza10V 7 months ago
Labels: enhancement

#278 - SBOL 2-3 converter - Exponentiation (Priority 4)

Issue - State: open - Opened by Gonza10V 7 months ago
Labels: enhancement

#277 - SBOL 2-3 converter - Unit_division (Priority 4)

Issue - State: open - Opened by Gonza10V 7 months ago
Labels: enhancement

#276 - SBOL 2-3 converter - Singular_unit (Priority 4)

Issue - State: open - Opened by Gonza10V 7 months ago
Labels: enhancement

#275 - SBOL 2-3 converter - Si_prefix (Priority 4)

Issue - State: open - Opened by Gonza10V 7 months ago
Labels: enhancement

#274 - SBOL 2-3 converter - Prefixed_unit (Priority 4)

Issue - State: open - Opened by Gonza10V 7 months ago
Labels: enhancement

#273 - SBOL 2-3 converter - Plan (Priority 3)

Issue - State: open - Opened by Gonza10V 7 months ago
Labels: enhancement

#272 - SBOL 2-3 converter - Model (Priority 3)

Issue - State: open - Opened by Gonza10V 7 months ago
Labels: enhancement

#271 - SBOL 2-3 converter - Measure (Priority 3)

Issue - State: open - Opened by Gonza10V 7 months ago
Labels: enhancement

#270 - SBOL 2-3 converter - Interface (Priority 3)

Issue - State: open - Opened by Gonza10V 7 months ago
Labels: enhancement

#269 - SBOL 2-3 converter - Externally_defined (Priority 3)

Issue - State: open - Opened by Gonza10V 7 months ago
Labels: enhancement

#268 - SBOL 2-3 converter - Experimental_data (Priority 3)

Issue - State: open - Opened by Gonza10V 7 months ago
Labels: enhancement

#267 - SBOL 2-3 converter - Experiment (Priority 3)

Issue - State: open - Opened by Gonza10V 7 months ago
Labels: enhancement

#266 - SBOL 2-3 converter - Entire_sequence (Priority 3)

Issue - State: open - Opened by Gonza10V 7 months ago
Labels: enhancement

#265 - SBOL 2-3 converter - Component_reference (Priority 3)

Issue - State: open - Opened by Gonza10V 7 months ago
Labels: enhancement

#264 - SBOL 2-3 converter - Binary_prefix (Priority 4)

Issue - State: open - Opened by Gonza10V 7 months ago
Labels: enhancement

#263 - SBOL 2-3 converter - Association (Priority 3)

Issue - State: open - Opened by Gonza10V 7 months ago
Labels: enhancement

#262 - SBOL 2-3 converter - Agent (Priority 3)

Issue - State: open - Opened by Gonza10V 7 months ago
Labels: enhancement

#261 - Remove workaround for ts-graphviz/setup-graphviz#593

Pull Request - State: closed - Opened by jakebeal 10 months ago

#260 - Issue 249

Pull Request - State: open - Opened by manulera 10 months ago - 1 comment

#259 - Different examples.org URIs in SBOL2 and SBOL3

Issue - State: open - Opened by manulera 10 months ago - 1 comment

#257 - Updating with last passing CI

Pull Request - State: closed - Opened by Gonza10V 10 months ago - 1 comment

#256 - update gitignore to include venv

Pull Request - State: closed - Opened by manulera 11 months ago

#255 - Add venv to .gitignore

Issue - State: closed - Opened by manulera 11 months ago

#254 - SBOL 2-3 converter - Local_sub_component (Priority 2)

Issue - State: open - Opened by PrashantVaidyanathan 11 months ago
Labels: enhancement

#253 - SBOL 2-3 converter - Constraint (Priority 2)

Issue - State: open - Opened by PrashantVaidyanathan 11 months ago
Labels: enhancement

#252 - SBOL 2-3 converter - Variable_component (Priority 2)

Issue - State: open - Opened by PrashantVaidyanathan 11 months ago
Labels: enhancement

#250 - SBOL 2-3 converter - Range (Priority 2)

Issue - State: open - Opened by PrashantVaidyanathan 11 months ago

#248 - SBOL 2-3 converter - Interaction (Priority 2)

Issue - State: open - Opened by PrashantVaidyanathan 11 months ago - 3 comments

#247 - SBOL 2-3 converter - Cut (Priority 2)

Issue - State: open - Opened by PrashantVaidyanathan 11 months ago - 1 comment

#246 - SBOL 2-3 converter - Component (Priority 2)

Issue - State: open - Opened by PrashantVaidyanathan 11 months ago - 2 comments

#245 - SBOL 2-3 converter - Combinatorial_derivation (Priority 2)

Issue - State: open - Opened by PrashantVaidyanathan 11 months ago
Labels: enhancement

#244 - SBOL 2-3 converter - Attachment (Priority 2)

Issue - State: open - Opened by PrashantVaidyanathan 11 months ago
Labels: enhancement

#243 - SBOL 2-3 converter - Variable_feature (Priority 2)

Issue - State: open - Opened by PrashantVaidyanathan 11 months ago
Labels: enhancement

#242 - SBOL 2-3 converter - Sequence_feature (Priority 1)

Issue - State: open - Opened by PrashantVaidyanathan 11 months ago
Labels: enhancement

#241 - SBOL 2-3 converter - Sequence_annotation (Priority 1)

Issue - State: open - Opened by PrashantVaidyanathan 11 months ago
Labels: enhancement

#240 - SBOL 2-3 converter - Sub_component (Priority 1)

Issue - State: open - Opened by PrashantVaidyanathan 11 months ago - 3 comments
Labels: enhancement, help wanted

#239 - Attempt to fix MacOS build failures (#232) by adjusting CI workflow

Pull Request - State: closed - Opened by jakebeal 11 months ago

#238 - Add Composite Check Functionality to SBOL Utilities

Pull Request - State: open - Opened by vinayakjeet 11 months ago - 3 comments
Labels: Changes Requested

#238 - Add Composite Check Functionality to SBOL Utilities

Pull Request - State: open - Opened by vinayakjeet 11 months ago

#237 - Implement 'find_feature' Utility Function in SBOL Tutorial

Pull Request - State: open - Opened by vinayakjeet 11 months ago - 1 comment
Labels: Changes Requested

#237 - Implement 'find_feature' Utility Function in SBOL Tutorial

Pull Request - State: open - Opened by vinayakjeet 11 months ago

#236 - Enhanced Error Handling for Missing Columns in Excel Input

Pull Request - State: open - Opened by vinayakjeet 11 months ago
Labels: Changes Requested

#236 - Enhanced Error Handling for Missing Columns in Excel Input

Pull Request - State: open - Opened by vinayakjeet 11 months ago

#235 - Update is_plasmid to Follow SEP 055 Recommendations

Pull Request - State: open - Opened by vinayakjeet 11 months ago

#235 - Update is_plasmid to Follow SEP 055 Recommendations

Pull Request - State: open - Opened by vinayakjeet 11 months ago
Labels: Changes Requested

#234 - Update is_plasmid to Follow SEP 055 Recommendations

Pull Request - State: closed - Opened by vinayakjeet 11 months ago

#234 - Update is_plasmid to Follow SEP 055 Recommendations

Pull Request - State: closed - Opened by vinayakjeet 11 months ago

#233 - BP011

Pull Request - State: closed - Opened by Gonza10V 11 months ago
Labels: enhancement

#232 - GitHub Mac tests failing to install Node.js properly

Issue - State: closed - Opened by jakebeal 12 months ago - 3 comments
Labels: bug

#231 - Pulls from forks fail due to secret not being shared

Issue - State: open - Opened by jakebeal 12 months ago - 5 comments
Labels: bug

#226 - Genbank features in translation list

Pull Request - State: closed - Opened by arnav-luhadiya about 1 year ago - 2 comments

#225 - Switched all usages of SBOL_REVERSE_COMPLEMENT to SO_REVERSE

Pull Request - State: closed - Opened by arnav-luhadiya about 1 year ago - 6 comments

#223 - Change Windows build to windows-2019

Pull Request - State: closed - Opened by jakebeal over 1 year ago

#222 - Implementation for SBOL2<-->SBOL3 converter

Pull Request - State: closed - Opened by Yehuda-Binik over 1 year ago - 4 comments

#221 - Complexity score calculation tests fail on Windows

Issue - State: open - Opened by jakebeal over 1 year ago
Labels: bug

#220 - Fix #219 to build on Windows and mac

Pull Request - State: closed - Opened by jakebeal over 1 year ago

#219 - Windows build is not running on Windows

Issue - State: closed - Opened by jakebeal over 1 year ago
Labels: bug

#218 - Unable to open temporary file in Windows

Issue - State: closed - Opened by Yehuda-Binik over 1 year ago - 2 comments
Labels: bug

#217 - Round-trip of SBOL2/SBOL3 python conversion

Pull Request - State: closed - Opened by jakebeal over 1 year ago - 1 comment

#216 - First pass on conversion from SBOL2 to SBOL3

Pull Request - State: closed - Opened by jakebeal over 1 year ago

#215 - First steps of SBOL3 to SBOL2 conversion in Python

Pull Request - State: closed - Opened by jakebeal over 1 year ago

#214 - Change filename with star to stop Windows failures

Pull Request - State: closed - Opened by jakebeal over 1 year ago - 1 comment

#213 - Fix small issue on line 230 in calculate_complexity_scores.py

Pull Request - State: closed - Opened by jguillen15 over 1 year ago - 2 comments

#212 - Improve documentation of calculate_complexity_scores.py utility

Pull Request - State: closed - Opened by jguillen15 over 1 year ago - 1 comment

#211 - Complexity score utility

Pull Request - State: closed - Opened by jakebeal almost 2 years ago

#210 - Convert2to3 error

Issue - State: closed - Opened by Gonza10V almost 2 years ago - 2 comments