SynBioDex/Excel-to-SBOL issues and pull requests

#137 - Sequence annotation

Issue - State: open - Opened by fxbuson about 1 year ago - 3 comments

#136 - Links to Template files

Issue - State: open - Opened by fxbuson about 1 year ago - 2 comments
Labels: documentation

#135 - Added changes to simple_library4 sheet and added output sheet out.nt

Pull Request - State: closed - Opened by JMante1 almost 2 years ago

#134 - fixes

Pull Request - State: closed - Opened by JMante1 about 2 years ago

#133 - new template

Pull Request - State: closed - Opened by JMante1 about 2 years ago

#132 - update the multi template stuff

Pull Request - State: closed - Opened by JMante1 about 2 years ago

#131 - multicolumn updates

Pull Request - State: closed - Opened by JMante1 about 2 years ago

#130 - Adding the constraints library template to the test files

Pull Request - State: closed - Opened by wdrav about 2 years ago

#129 - Multicolumn

Pull Request - State: closed - Opened by JMante1 about 2 years ago

#128 - Testing files

Pull Request - State: closed - Opened by wdrav about 2 years ago

#127 - col def improve column blocks to function

Issue - State: closed - Opened by JMante1 about 2 years ago
Labels: new feature, highest priority

#126 - Introductory change to testing

Pull Request - State: closed - Opened by wdrav over 2 years ago

#125 - Changes allowing circular types

Pull Request - State: closed - Opened by wdrav over 2 years ago - 2 comments

#124 - update templates

Pull Request - State: closed - Opened by JMante1 over 2 years ago

#123 - added reading of version and sbol3 update for multi instance

Pull Request - State: closed - Opened by JMante1 over 2 years ago

#122 - can now add universal columns to init sheet

Pull Request - State: closed - Opened by JMante1 over 2 years ago

#121 - seed stuff

Pull Request - State: closed - Opened by JMante1 over 2 years ago

#120 - Delete temp2.py

Pull Request - State: closed - Opened by JMante1 over 2 years ago

#119 - fixed fc error issue

Pull Request - State: closed - Opened by JMante1 over 2 years ago

#118 - add methods for module and functional compents

Pull Request - State: closed - Opened by JMante1 over 2 years ago

#117 - fixing dnaregion bug

Pull Request - State: closed - Opened by JMante1 over 2 years ago

#116 - further testing

Pull Request - State: closed - Opened by JMante1 over 2 years ago

#115 - need special case for module with functional components

Issue - State: closed - Opened by JMante1 over 2 years ago
Labels: bug

#114 - for sbol2 object id linkages link to url without /1 at the end

Issue - State: open - Opened by JMante1 over 2 years ago
Labels: bug

#113 - Updated Template Example

Issue - State: closed - Opened by saisam17 over 2 years ago

#112 - All ComponentDefinitions have DNARegion even though another type is specified

Issue - State: closed - Opened by saisam17 over 2 years ago
Labels: bug

#111 - latest

Pull Request - State: closed - Opened by JMante1 over 2 years ago

#110 - added an sbol term underscore error message

Pull Request - State: closed - Opened by JMante1 over 2 years ago

#109 - edits to solve github issues

Pull Request - State: closed - Opened by JMante1 over 2 years ago

#108 - Updated Listed multiple items and split by comma not showing all items in output

Issue - State: closed - Opened by saisam17 over 2 years ago - 4 comments
Labels: bug

#107 - added try excepts and bug fixes

Pull Request - State: closed - Opened by saisam17 over 2 years ago - 2 comments

#106 - Lookups are not working

Issue - State: closed - Opened by saisam17 over 2 years ago - 2 comments
Labels: bug

#105 - read_excel python function error: default value of x in initialize.py needs to be a list for usecols to pass

Issue - State: closed - Opened by saisam17 over 2 years ago - 4 comments
Labels: bug

#104 - The split method throws out of bounds error

Issue - State: closed - Opened by saisam17 over 2 years ago - 6 comments
Labels: bug

#103 - Error when there is a mismatch to sheet column name

Issue - State: closed - Opened by saisam17 over 2 years ago - 1 comment
Labels: bug

#102 - Numbers are not being read in as strings

Issue - State: closed - Opened by saisam17 over 2 years ago - 1 comment
Labels: bug

#101 - Spaces in namespace urls are not being trimmed away

Issue - State: closed - Opened by saisam17 over 2 years ago - 1 comment
Labels: bug

#100 - When errors are reported, the message should indicate on which sheet, column and row the error is matched

Issue - State: closed - Opened by saisam17 over 2 years ago - 1 comment
Labels: new feature

#99 - No error message for SBOL Term missing underscore

Issue - State: closed - Opened by saisam17 over 2 years ago - 1 comment
Labels: bug

#98 - Update comp_column_functions.py

Pull Request - State: closed - Opened by JMante1 over 2 years ago

#97 - Text Property 'True' Being Read As Boolean

Issue - State: closed - Opened by saisam17 over 2 years ago - 2 comments
Labels: bug

#96 - How to change namespace

Issue - State: open - Opened by hgscott over 2 years ago - 2 comments
Labels: documentation, new feature

#95 - Make function callable

Pull Request - State: closed - Opened by hgscott over 2 years ago

#94 - Converter.py isn't producing an SBOL file with the available test files

Issue - State: closed - Opened by saisam17 over 2 years ago - 6 comments
Labels: bug

#93 - allow multiple columns for a list value

Issue - State: closed - Opened by JMante1 over 2 years ago
Labels: new feature

#92 - How to Import

Issue - State: closed - Opened by hgscott over 2 years ago - 5 comments
Labels: documentation

#91 - Sheet restructure

Pull Request - State: closed - Opened by JMante1 over 2 years ago

#90 - Update README.md

Pull Request - State: closed - Opened by JMante1 almost 3 years ago

#89 - Update README.md

Pull Request - State: closed - Opened by JMante1 almost 3 years ago

#88 - Seq from URI

Issue - State: closed - Opened by JMante1 almost 3 years ago - 2 comments
Labels: new feature

#87 - Pointer to sbol-utilities for SBOL3 version

Issue - State: closed - Opened by jakebeal almost 3 years ago
Labels: documentation

#86 - Integrated tyto with Excel-to-SBOL

Pull Request - State: closed - Opened by PRUBHTEJ about 3 years ago - 2 comments

#85 - Role Types

Issue - State: closed - Opened by JMante1 about 3 years ago
Labels: documentation

#84 - An instruction video

Issue - State: open - Opened by JMante1 about 3 years ago
Labels: documentation

#83 - Allow Google sheets as well as Excel Files

Issue - State: closed - Opened by JMante1 about 3 years ago - 1 comment
Labels: new feature

#82 - added a new template to use with the plugin

Pull Request - State: closed - Opened by JMante1 about 3 years ago

#81 - Switch the way column transformation works

Issue - State: closed - Opened by JMante1 about 3 years ago - 1 comment
Labels: new feature, highest priority

#80 - changed utils to excel2sbol

Pull Request - State: closed - Opened by JMante1 about 3 years ago

#79 - Updating the CLI Commands for MacOS/LinuxOS

Pull Request - State: closed - Opened by PRUBHTEJ about 3 years ago