StoreyLab/biobroom issues and pull requests

#27 - unitdy() function

Issue - State: open - Opened by therealjpetereit almost 2 years ago

#26 - tbl_df() is deprecated

Issue - State: open - Opened by ewallace over 3 years ago

#25 - Add option to include rowData similar to addPheno/colData

Issue - State: open - Opened by hummuscience almost 4 years ago

#24 - CRAN Check Failure for Upcoming broom Release

Issue - State: open - Opened by simonpcouch about 4 years ago

#23 - tidy on limma fit does not contain log2FC

Issue - State: open - Opened by Julia-F-S over 4 years ago

#22 - Add fasta format tidier?

Issue - State: open - Opened by clairemcwhite over 4 years ago

#21 - Standardized location for dplyr-like methods on SE objects

Issue - State: closed - Opened by LTLA over 5 years ago - 1 comment

#20 - `tidy.DESeqTransform` method

Issue - State: open - Opened by tavareshugo almost 6 years ago

#19 - Correct rendering of titles

Pull Request - State: open - Opened by llrs almost 6 years ago

#18 - Bugfix renaming of columns in augment.MArrayLM

Pull Request - State: closed - Opened by ltobalina almost 6 years ago

#17 - `addFeatures` to add columns of the ExpressionSet features data

Pull Request - State: open - Opened by MahShaaban about 6 years ago

#16 - Handling columnames with special character

Issue - State: closed - Opened by chapmandu2 almost 8 years ago - 1 comment

#15 - typo in augment.DGEList leads to error

Issue - State: closed - Opened by heike almost 8 years ago - 1 comment

#14 - Import pData from Biobase

Pull Request - State: closed - Opened by aaronwolen about 8 years ago

#13 - Tidy a vcf?

Issue - State: open - Opened by davidroberson about 8 years ago

#12 - Enables use of arbitrary assayDataElement from ExpressionSet when tidying

Pull Request - State: closed - Opened by lianos over 8 years ago

#11 - Homogenizes output from tidiers and adds tests

Pull Request - State: closed - Opened by lianos over 8 years ago

#10 - edgeR glm/lrt objects

Issue - State: open - Opened by ajbass over 8 years ago

#9 - Add GRangesList

Issue - State: closed - Opened by ajbass over 8 years ago - 1 comment
Labels: enhancement

#8 - Add sva tidiers

Issue - State: closed - Opened by ajbass over 8 years ago - 3 comments
Labels: enhancement

#7 - Adding tidier for MSnSet objects

Pull Request - State: closed - Opened by lgatto over 8 years ago - 2 comments

#6 - Add EDGE tidiers

Issue - State: closed - Opened by dgrtwo about 9 years ago

#5 - Add testthat unit tests

Issue - State: closed - Opened by dgrtwo about 9 years ago - 2 comments

#4 - Pass R CMD Check

Issue - State: closed - Opened by dgrtwo about 9 years ago
Labels: bug

#3 - Write q-value vignette

Issue - State: closed - Opened by dgrtwo about 9 years ago
Labels: enhancement

#2 - Write differential expression vignette