SilverLabUCL/PySilverLabNWB issues and pull requests

#82 - Try out newer version of nptdms

Issue - State: open - Opened by ageorgou over 3 years ago
Labels: low-priority

#81 - NWB file size for variable-shape ROIs

Issue - State: open - Opened by ageorgou over 3 years ago
Labels: NWB

#80 - Tests for variable resolutions

Issue - State: open - Opened by ageorgou over 3 years ago
Labels: test

#79 - Installing av package doesn't work on OS X on Travis

Issue - State: open - Opened by ageorgou almost 4 years ago

#78 - Subsampling nwb

Pull Request - State: open - Opened by alessandrofelder almost 4 years ago - 1 comment

#77 - TDMS format

Issue - State: closed - Opened by alessandrofelder about 4 years ago - 1 comment
Labels: data, to-discuss

#76 - Inconsistencies in trial times in header

Issue - State: open - Opened by ageorgou about 4 years ago
Labels: data, to-discuss

#75 - Read session start time from header

Issue - State: open - Opened by ageorgou about 4 years ago
Labels: data, to-discuss

#74 - Support for ROIs with different size or resolution

Pull Request - State: open - Opened by ageorgou about 4 years ago - 4 comments

#73 - Flexible subject reading

Pull Request - State: open - Opened by alessandrofelder about 4 years ago

#72 - Support for volumetric data

Issue - State: open - Opened by ageorgou about 4 years ago
Labels: data, NWB

#71 - Rationalise units

Issue - State: open - Opened by ageorgou about 4 years ago
Labels: data, NWB

#70 - More detailed documentation

Issue - State: open - Opened by ageorgou about 4 years ago
Labels: documentation

#69 - update release date

Pull Request - State: closed - Opened by alessandrofelder about 4 years ago

#68 - update version for release 0.1.2 in various places

Pull Request - State: closed - Opened by alessandrofelder about 4 years ago

#67 - Revert splitting of optical channels

Pull Request - State: closed - Opened by alessandrofelder about 4 years ago

#66 - Record LabVIEW version in metadata

Pull Request - State: closed - Opened by ageorgou over 4 years ago - 1 comment

#65 - replace deprecated ImagingPlane parameters

Pull Request - State: closed - Opened by alessandrofelder over 4 years ago - 1 comment

#64 - Update pynwb version

Issue - State: closed - Opened by ageorgou over 4 years ago - 1 comment
Labels: NWB

#63 - Replace manifold

Issue - State: closed - Opened by ageorgou over 4 years ago - 1 comment
Labels: NWB

#62 - update version to match what we claim in changelog

Pull Request - State: closed - Opened by alessandrofelder over 4 years ago

#61 - Get the correct ROI data in a nicer way

Pull Request - State: closed - Opened by ageorgou over 4 years ago

#60 - Numerical errors with temporal data conversion?

Issue - State: closed - Opened by alessandrofelder over 4 years ago - 2 comments

#59 - Processing ROI data appropriately

Issue - State: open - Opened by alessandrofelder over 4 years ago - 2 comments
Labels: bug, to-discuss

#58 - New pixel time offsets and cycle times

Pull Request - State: closed - Opened by alessandrofelder over 4 years ago - 1 comment

#57 - stop wheel from building for python 2

Pull Request - State: closed - Opened by alessandrofelder over 4 years ago - 3 comments

#56 - remove sentence about PyPI, fix date and update changelog

Pull Request - State: closed - Opened by alessandrofelder over 4 years ago - 2 comments

#55 - enhance interfacing with metadata

Pull Request - State: open - Opened by alessandrofelder over 4 years ago - 1 comment

#54 - update usage docs to cover creating from metadata

Pull Request - State: closed - Opened by alessandrofelder over 4 years ago - 1 comment

#53 - update signatures for large files

Pull Request - State: closed - Opened by alessandrofelder over 4 years ago - 2 comments

#52 - Minor tweaks to metadata loading

Issue - State: open - Opened by pgleeson over 4 years ago - 2 comments
Labels: interface, documentation

#51 - update extension yamls

Pull Request - State: closed - Opened by alessandrofelder over 4 years ago - 2 comments

#50 - Clearer YAML syntax

Pull Request - State: closed - Opened by jonc125 over 4 years ago - 2 comments

#49 - Create a file from metadata only

Pull Request - State: closed - Opened by ageorgou over 4 years ago - 1 comment

#48 - add metadata for reference frame

Issue - State: open - Opened by alessandrofelder over 4 years ago

#47 - require earlier versions of npTDMS for now

Pull Request - State: closed - Opened by alessandrofelder over 4 years ago - 1 comment

#46 - TDMS reading fails with newest npTDMS

Issue - State: open - Opened by alessandrofelder over 4 years ago

#45 - Refactor metadata

Pull Request - State: closed - Opened by alessandrofelder over 4 years ago - 1 comment

#44 - Ignore default metadata

Pull Request - State: closed - Opened by alessandrofelder over 4 years ago - 1 comment

#43 - Remove lingering bits of Python 2 support

Pull Request - State: closed - Opened by ageorgou over 4 years ago - 1 comment

#42 - Metadata editor treats wavelengths as strings

Issue - State: open - Opened by ageorgou over 4 years ago
Labels: bug, gui

#41 - Add option to create NWB file from metadata.yml only

Issue - State: closed - Opened by pgleeson over 4 years ago - 5 comments
Labels: interface

#40 - sampled LabView 2.3.1 data on Travis

Issue - State: open - Opened by alessandrofelder over 4 years ago - 1 comment
Labels: data, test

#39 - Release to PyPI?

Issue - State: open - Opened by pgleeson over 4 years ago - 3 comments
Labels: interface

#38 - Different precisions for data across platforms

Issue - State: open - Opened by ageorgou over 4 years ago
Labels: NWB

#37 - Dummy metadata copied into file

Issue - State: closed - Opened by ageorgou over 4 years ago - 5 comments
Labels: data, gui

#36 - Variable-shape ROIs

Issue - State: open - Opened by ageorgou over 4 years ago - 3 comments
Labels: data, NWB

#35 - Tests for new header files

Pull Request - State: closed - Opened by alessandrofelder over 4 years ago - 2 comments

#34 - Delay parsing trial times

Pull Request - State: closed - Opened by ageorgou over 4 years ago - 2 comments

#33 - Use a class for LabView headers

Pull Request - State: closed - Opened by ageorgou over 4 years ago - 4 comments

#32 - Default location of signature input files

Issue - State: open - Opened by ageorgou over 4 years ago
Labels: bug, test

#31 - Improve compression

Pull Request - State: closed - Opened by alessandrofelder over 4 years ago - 2 comments

#30 - add_compression

Pull Request - State: closed - Opened by alessandrofelder over 4 years ago - 1 comment

#29 - Remove all uses of six and other Python 2 support

Issue - State: closed - Opened by ageorgou over 4 years ago

#28 - Move to pynwb 1.2.1

Pull Request - State: closed - Opened by ageorgou over 4 years ago - 3 comments

#27 - Devices missing from signatures

Issue - State: closed - Opened by ageorgou over 4 years ago - 1 comment
Labels: test

#26 - Are namespaces/extensions cached in example files?

Issue - State: closed - Opened by pgleeson over 4 years ago - 11 comments
Labels: NWB

#25 - compress NWB2 data with gzip

Issue - State: open - Opened by alessandrofelder over 4 years ago - 2 comments
Labels: NWB

#24 - Adapt to newer versions of LabView software

Pull Request - State: closed - Opened by alessandrofelder almost 5 years ago - 2 comments

#23 - Adapt to newer LabView setup

Issue - State: open - Opened by ageorgou almost 5 years ago - 1 comment
Labels: data, to-discuss

#22 - Update signatures for NWB2

Pull Request - State: closed - Opened by ageorgou almost 5 years ago - 4 comments

#21 - Investigate av installation on 32-bit Windows

Issue - State: open - Opened by ageorgou almost 5 years ago

#20 - Add tox to dependencies

Issue - State: closed - Opened by ageorgou almost 5 years ago - 1 comment

#19 - General issues to discuss with Silver lab

Issue - State: open - Opened by alessandrofelder almost 5 years ago
Labels: question

#18 - Add custom extensions

Pull Request - State: closed - Opened by alessandrofelder almost 5 years ago - 6 comments

#17 - Fix nextafter hack

Pull Request - State: closed - Opened by alessandrofelder almost 5 years ago

#16 - epoch index calculation can fail

Issue - State: closed - Opened by alessandrofelder almost 5 years ago - 4 comments

#15 - Consider checking doctests automatically

Issue - State: open - Opened by jonc125 almost 5 years ago
Labels: test

#14 - Red and green channels on the same imaging plane

Issue - State: closed - Opened by ageorgou almost 5 years ago - 4 comments
Labels: NWB

#13 - Adapt to updated libs

Pull Request - State: closed - Opened by alessandrofelder almost 5 years ago - 1 comment

#12 - Correctly generate NWB2 files with all previously existing fields

Issue - State: open - Opened by alessandrofelder almost 5 years ago - 3 comments
Labels: NWB

#11 - Update versions of dependencies

Issue - State: closed - Opened by ageorgou almost 5 years ago - 3 comments

#10 - Migrate other relevant issues from the legacy repo

Issue - State: open - Opened by jonc125 almost 5 years ago

#9 - Set up a GitHub project to manage work

Issue - State: open - Opened by jonc125 almost 5 years ago

#8 - Improve signature creation for NWB2 files

Issue - State: closed - Opened by jonc125 almost 5 years ago - 1 comment
Labels: test

#7 - Use 16-bit unsigned ints for fluoresence data

Issue - State: open - Opened by jonc125 almost 5 years ago

#6 - Update to latest NWB2 version

Issue - State: open - Opened by jonc125 almost 5 years ago - 2 comments
Labels: NWB

#5 - Remove bits_per_pixel

Issue - State: closed - Opened by ageorgou almost 6 years ago - 1 comment
Labels: NWB

#4 - Import code from old repository

Pull Request - State: closed - Opened by jonc125 almost 6 years ago - 3 comments

#3 - Create project template

Pull Request - State: closed - Opened by jonc125 about 6 years ago - 5 comments

#2 - Copy initial code over

Issue - State: closed - Opened by jonc125 about 6 years ago

#1 - Set up CI

Issue - State: closed - Opened by jonc125 about 6 years ago - 1 comment

GitHub / SilverLabUCL/PySilverLabNWB issues and pull requests