Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / SciLifeLab/genologics issues and pull requests

#246 - Fix bug: extra config

Pull Request - State: closed - Opened by aanil 5 months ago
Labels: no validation

#245 - Modifications for py3.12 compatibility

Pull Request - State: closed - Opened by aanil 5 months ago
Labels: no validation

#244 - Implement continous integration for linting and formatting and adress issues

Pull Request - State: closed - Opened by kedhammar 5 months ago
Labels: enhancement

#243 - Decouple scilifelab travis

Pull Request - State: closed - Opened by aanil 10 months ago
Labels: no validation

#242 - Update maintainer info

Pull Request - State: closed - Opened by chuan-wang about 1 year ago
Labels: no validation

#241 - Add support for step creation

Pull Request - State: closed - Opened by rernst over 1 year ago
Labels: no validation

#240 - "demux" end point

Issue - State: open - Opened by rich7409 over 1 year ago - 1 comment

#239 - UDF handling broken for Python 3.9+ by xml.etree API change

Issue - State: open - Opened by elgow over 1 year ago - 1 comment

#238 - [Function request] A way to download tarfiles.

Issue - State: open - Opened by ggavelis over 1 year ago

#237 - Remove deprecated function and update code to be compatible with py3.9

Pull Request - State: closed - Opened by aanil almost 2 years ago
Labels: no validation

#236 - Update requirements.txt

Pull Request - State: closed - Opened by mayabrandi almost 3 years ago

#235 - Bug: AttributeError: 'ReadTimeout' object has no attribute 'message'

Issue - State: open - Opened by patrikgrenfeldt about 3 years ago - 1 comment

#234 - Make this repository the main one

Issue - State: open - Opened by patrikgrenfeldt over 3 years ago

#233 - Fix issue about error message

Pull Request - State: closed - Opened by chuan-wang over 3 years ago
Labels: no validation

#232 - Port scripts to python3

Pull Request - State: closed - Opened by chuan-wang over 3 years ago - 1 comment
Labels: validation

#231 - Update README.md

Pull Request - State: closed - Opened by mayabrandi over 3 years ago

#230 - Dev 1159 sync with sthlm

Pull Request - State: closed - Opened by GitEdvard over 3 years ago

#229 - Develop-1159, Rebase from sthlm

Pull Request - State: closed - Opened by GitEdvard over 3 years ago

#228 - Develop-1159, Rebase from SciLifeLab, then transform to python 3

Pull Request - State: closed - Opened by GitEdvard over 3 years ago - 3 comments

#227 - Added date-started and date-completed tags

Pull Request - State: closed - Opened by bdurham1 over 4 years ago
Labels: no validation

#226 - add PR label enforcer

Pull Request - State: closed - Opened by ssjunnebo almost 5 years ago
Labels: no validation

#225 - adding name to ReagentType

Pull Request - State: closed - Opened by mayabrandi almost 5 years ago

#224 - Adding permitted-reagent-categories to ProtocolStep

Pull Request - State: closed - Opened by upli about 5 years ago - 4 comments

#223 - Adding Automations

Pull Request - State: closed - Opened by mayabrandi over 5 years ago - 5 comments

#222 - placement list update

Pull Request - State: closed - Opened by Galithil over 5 years ago

#221 - adding steps/reagents mapping

Pull Request - State: closed - Opened by Galithil almost 6 years ago

#220 - Allow XML dumping for test purposes.

Pull Request - State: closed - Opened by Galithil almost 6 years ago

#219 - Some configuration changes

Pull Request - State: closed - Opened by Galithil about 6 years ago - 1 comment

#218 - Python 2.6 compatibility

Pull Request - State: closed - Opened by rernst over 6 years ago - 1 comment

#217 - Check if batch operations are supported before running

Pull Request - State: closed - Opened by tsnowlan over 6 years ago
Labels: no validation

#216 - Create new lab

Issue - State: open - Opened by sawibo over 6 years ago

#215 - bug fix

Pull Request - State: closed - Opened by mayabrandi over 6 years ago

#214 - map ProcessType for 4.2.

Pull Request - State: closed - Opened by Galithil over 6 years ago

#213 - Update queues

Pull Request - State: closed - Opened by Galithil over 6 years ago - 1 comment

#212 - Small QOL improvements

Pull Request - State: closed - Opened by Galithil over 6 years ago

#211 - Changed 'type' to 'process-type'

Pull Request - State: closed - Opened by IsaacJT over 6 years ago - 3 comments

#210 - Support for Decimals

Pull Request - State: closed - Opened by Galithil almost 7 years ago - 2 comments

#209 - Adding a small testing function that allows users to plug XML instead…

Pull Request - State: closed - Opened by Galithil almost 7 years ago

#208 - update version to 0.3.18

Pull Request - State: closed - Opened by Galithil almost 7 years ago

#207 - Extended Researcher to handle Roles and Permissions.

Pull Request - State: closed - Opened by Galithil almost 7 years ago

#206 - 0.3.16 : program status

Pull Request - State: closed - Opened by Galithil almost 7 years ago

#205 - Adding pooling capabilities

Pull Request - State: closed - Opened by Galithil almost 7 years ago - 1 comment

#204 - bugfix for escalations

Pull Request - State: closed - Opened by Galithil about 7 years ago

#203 - Batch create samples

Issue - State: closed - Opened by robinandeer about 7 years ago - 2 comments

#201 - Custom configuration path does not work

Issue - State: open - Opened by rernst over 7 years ago - 5 comments

#200 - reallow for loops for udf descriptors for python 2+

Pull Request - State: closed - Opened by Galithil over 7 years ago

#199 - Another descriptor refactor

Pull Request - State: closed - Opened by tcezard over 7 years ago - 1 comment

#198 - Edit UDF config: "Field is required and must be filled in"

Issue - State: open - Opened by robinandeer over 7 years ago - 1 comment

#197 - adding Artifact.attach_file

Pull Request - State: closed - Opened by Galithil over 7 years ago - 2 comments

#196 - Descriptor refactor

Pull Request - State: closed - Opened by tcezard almost 8 years ago - 2 comments

#195 - Search + additional info

Pull Request - State: closed - Opened by tcezard almost 8 years ago - 2 comments

#194 - Versioning

Pull Request - State: closed - Opened by Galithil almost 8 years ago

#193 - Sample creation

Issue - State: open - Opened by robinandeer almost 8 years ago - 1 comment

#192 - versioning

Issue - State: closed - Opened by robinandeer almost 8 years ago - 2 comments

#191 - Step advance

Pull Request - State: closed - Opened by tcezard almost 8 years ago - 5 comments

#190 - Sample creation

Pull Request - State: closed - Opened by tcezard almost 8 years ago - 1 comment

#189 - Create new samples

Issue - State: closed - Opened by robinandeer almost 8 years ago - 1 comment

#188 - versionning issue

Issue - State: closed - Opened by catherineleroyinivata almost 8 years ago - 1 comment

#187 - Updates for windows and mapping step advance

Pull Request - State: closed - Opened by Galithil about 8 years ago

#186 - error installing genologics on windows machine

Issue - State: closed - Opened by catherineleroyinivata about 8 years ago

#185 - Config patch

Pull Request - State: closed - Opened by wefer about 8 years ago - 1 comment

#184 - Fix Adding new UDF to udf dictionary

Pull Request - State: closed - Opened by tcezard over 8 years ago - 2 comments

#183 - Adding a numeric UDF returns ElementTree error

Issue - State: closed - Opened by juliambrosman over 8 years ago - 2 comments

#182 - handle non basestring cases

Pull Request - State: closed - Opened by Galithil over 8 years ago

#181 - do not return a string from an unicode, it confuses Etree

Pull Request - State: closed - Opened by Galithil over 8 years ago

#180 - Rework unicode handling for udf values in python2

Pull Request - State: closed - Opened by Galithil over 8 years ago

#179 - Expanding Udfconfig

Pull Request - State: closed - Opened by Galithil over 8 years ago

#178 - Entity setter changes

Pull Request - State: closed - Opened by paalmbj over 8 years ago

#177 - Searches2

Pull Request - State: closed - Opened by paalmbj over 8 years ago - 1 comment

#176 - Handle errors without <message> element

Pull Request - State: closed - Opened by paalmbj over 8 years ago - 2 comments

#175 - Work-arounds for python 2.6 support

Pull Request - State: closed - Opened by paalmbj over 8 years ago - 29 comments

#174 - Fix missing import

Pull Request - State: closed - Opened by tcezard over 8 years ago - 5 comments

#173 - Split entities

Pull Request - State: closed - Opened by tcezard over 8 years ago - 8 comments

#172 - Removing the EPPs

Pull Request - State: closed - Opened by Galithil over 8 years ago

#171 - separating core API from site specific logic

Issue - State: closed - Opened by tcezard over 8 years ago - 1 comment

#170 - Split entities in two

Issue - State: closed - Opened by tcezard over 8 years ago - 1 comment

#169 - Create entities from scratch

Pull Request - State: closed - Opened by tcezard over 8 years ago - 5 comments

#168 - Fix check for high CV

Pull Request - State: closed - Opened by jgruselius over 8 years ago - 1 comment
Labels: bug

#167 - fixing concentration calculation for bad samples

Pull Request - State: closed - Opened by Galithil over 8 years ago

#166 - Display error message for high CV's

Pull Request - State: closed - Opened by jgruselius over 8 years ago
Labels: enhancement

#165 - EPP update

Pull Request - State: closed - Opened by Galithil over 8 years ago

#164 - Add workflow

Pull Request - State: closed - Opened by tcezard over 8 years ago - 1 comment

#163 - Add comparison method for ElementTree

Pull Request - State: closed - Opened by tcezard over 8 years ago - 1 comment

#162 - Update selected containers on new placement

Pull Request - State: closed - Opened by Galithil over 8 years ago - 4 comments

#161 - add test for getting and setting Step in placements

Pull Request - State: closed - Opened by tcezard over 8 years ago - 1 comment

#160 - adding support for step artifact placement

Pull Request - State: closed - Opened by Galithil over 8 years ago - 2 comments

#159 - python 3 compatibility

Issue - State: closed - Opened by juliambrosman over 8 years ago - 4 comments

#158 - add test for unicode values in UDFdictionaries

Pull Request - State: closed - Opened by tcezard over 8 years ago - 1 comment

#157 - typo

Pull Request - State: closed - Opened by Galithil over 8 years ago

#156 - getting python 2 to work again with unicode

Pull Request - State: closed - Opened by Galithil over 8 years ago

#155 - neoprep wants 16 lines, give it 16 lines

Pull Request - State: closed - Opened by Galithil over 8 years ago

#154 - Reagent lot and kit

Pull Request - State: closed - Opened by tcezard over 8 years ago - 9 comments

#153 - version bump

Pull Request - State: closed - Opened by Galithil over 8 years ago

#152 - Normalization

Pull Request - State: closed - Opened by Galithil over 8 years ago

#151 - Change to StepActions

Issue - State: closed - Opened by tcezard over 8 years ago - 1 comment

#150 - Meetup at Genologics UGM in barcelona

Issue - State: closed - Opened by tcezard over 8 years ago - 3 comments

#149 - python 2-->3

Pull Request - State: closed - Opened by tcezard over 8 years ago - 11 comments

#148 - add "verify" SSL cert option to LIMS API class

Pull Request - State: closed - Opened by robinandeer over 8 years ago - 1 comment

#147 - questions about BASEURL in config file

Issue - State: closed - Opened by MAKO-Bioinfo over 8 years ago - 6 comments
Labels: question