SainsburyWellcomeCentre/WAZP issues and pull requests

#106 - Use updated versions of actions

Pull Request - State: open - Opened by niksirbi 5 months ago

#105 - Make `mypy` happy again.

Pull Request - State: open - Opened by samcunliffe 7 months ago

#104 - Support 3.11.

Pull Request - State: open - Opened by samcunliffe 7 months ago - 1 comment

#103 - Speed up ROI drawing for users

Pull Request - State: open - Opened by niksirbi 8 months ago - 1 comment
Labels: enhancement, user feedback

#102 - Refactor sample projects generation scripts into a proper tested utility

Issue - State: open - Opened by niksirbi 8 months ago
Labels: enhancement

#101 - Labelling bounding boxes new data.

Issue - State: closed - Opened by samcunliffe 11 months ago - 1 comment

#100 - Data hosting

Pull Request - State: closed - Opened by niksirbi 12 months ago - 3 comments

#99 - added check-manifest pre-commit hook

Pull Request - State: closed - Opened by niksirbi about 1 year ago - 1 comment

#98 - ROI drawing: can we implement standard shapes, too?

Issue - State: open - Opened by sannatitus about 1 year ago - 4 comments
Labels: enhancement, user feedback

#97 - Make black happy.

Pull Request - State: closed - Opened by samcunliffe about 1 year ago - 1 comment

#96 - Printing chrome and chromedriver versions.

Pull Request - State: closed - Opened by samcunliffe about 1 year ago - 2 comments
Labels: bug

#95 - Intercept KeyError on navigation straight to the metadata tab without adding a config.

Pull Request - State: open - Opened by samcunliffe about 1 year ago - 1 comment
Labels: user feedback

#94 - Windows instructions for running the chromedriver tests.

Pull Request - State: closed - Opened by samcunliffe about 1 year ago - 5 comments

#93 - [Missing metadata error] ignore this :)

Issue - State: closed - Opened by sannatitus about 1 year ago - 1 comment
Labels: wontfix

#92 - Dream test parametrisation

Issue - State: open - Opened by sfmig about 1 year ago - 1 comment

#91 - Add message when adding rows for checking missing files

Issue - State: open - Opened by sfmig about 1 year ago

#90 - Fix 85 generate only a subset of YAMLs from all rows defined in spreadsheet

Pull Request - State: closed - Opened by sfmig about 1 year ago - 1 comment

#89 - Enforce that each ROI is drawn only once

Pull Request - State: closed - Opened by niksirbi about 1 year ago

#88 - Add a test helper pytest fixture.

Pull Request - State: closed - Opened by samcunliffe about 1 year ago - 1 comment
Labels: hackday

#87 - `ruff`

Pull Request - State: closed - Opened by samcunliffe about 1 year ago - 2 comments
Labels: task, enhancement, hackday

#86 - Add codecov badge

Pull Request - State: closed - Opened by samcunliffe about 1 year ago

#85 - generate yaml files from spreadsheet

Issue - State: closed - Opened by sannatitus about 1 year ago - 3 comments
Labels: user feedback, hackday

#84 - defining ROIs

Issue - State: closed - Opened by sannatitus about 1 year ago - 4 comments
Labels: user feedback, hackday

#83 - loading the dashboard and file paths of the home page

Issue - State: closed - Opened by sannatitus about 1 year ago - 3 comments
Labels: user feedback, hackday

#82 - Common components integration tests

Pull Request - State: closed - Opened by sfmig about 1 year ago - 4 comments
Labels: enhancement

#81 - Show a warning if config file not loaded

Issue - State: open - Opened by sfmig about 1 year ago - 2 comments
Labels: enhancement, user feedback

#80 - Allow the user to delete a metadata file from the metadata tab

Issue - State: open - Opened by sfmig about 1 year ago

#79 - Warn if metadata files have no corresponding videos

Issue - State: open - Opened by sfmig about 1 year ago

#78 - Add 'File' as a not editable field in the metadata table

Issue - State: open - Opened by sfmig about 1 year ago

#77 - Check consistency between metadata fields

Issue - State: open - Opened by sfmig about 1 year ago

#76 - ROIs and Events not editable in metadata table

Pull Request - State: closed - Opened by sfmig about 1 year ago - 3 comments

#75 - Consider events as a time period

Issue - State: open - Opened by sfmig over 1 year ago

#74 - Add trajectories plot

Pull Request - State: open - Opened by sfmig over 1 year ago

#73 - Save number of frames to video's metadata file

Issue - State: open - Opened by niksirbi over 1 year ago
Labels: enhancement

#72 - Add events tab

Pull Request - State: open - Opened by niksirbi over 1 year ago - 2 comments

#71 - Consider replacing frame slider with input field

Issue - State: open - Opened by niksirbi over 1 year ago
Labels: enhancement

#70 - update mypy in precommits

Pull Request - State: closed - Opened by sfmig over 1 year ago

#69 - Things to get user feedback on

Issue - State: open - Opened by sfmig over 1 year ago - 4 comments
Labels: question

#68 - Add integration-testing instructions.

Pull Request - State: closed - Opened by samcunliffe over 1 year ago - 3 comments
Labels: documentation

#67 - Add export tsv

Pull Request - State: open - Opened by sfmig over 1 year ago - 2 comments

#66 - Restructure df columns

Pull Request - State: closed - Opened by sfmig over 1 year ago - 4 comments

#65 - Intermittent `WebDriverException: chrome not reachable` error on Windows runners.

Issue - State: closed - Opened by samcunliffe over 1 year ago - 4 comments
Labels: bug, upstream

#64 - ROI additions

Pull Request - State: closed - Opened by niksirbi over 1 year ago - 4 comments

#63 - update NIU actions to v2

Pull Request - State: closed - Opened by niksirbi over 1 year ago - 1 comment

#62 - Add export clipboard component

Pull Request - State: closed - Opened by sfmig over 1 year ago - 1 comment

#61 - Smoke test other tabs.

Pull Request - State: closed - Opened by samcunliffe over 1 year ago - 1 comment
Labels: help wanted, question

#60 - Specify events by inputting frame number

Issue - State: open - Opened by samcunliffe over 1 year ago
Labels: core feature, enhancement

#59 - 79 → 88

Pull Request - State: closed - Opened by samcunliffe over 1 year ago - 4 comments

#58 - Single point of entry.

Pull Request - State: closed - Opened by samcunliffe over 1 year ago - 1 comment
Labels: enhancement

#57 - Imports vs execution.

Pull Request - State: closed - Opened by samcunliffe over 1 year ago

#56 - refactoring

Issue - State: open - Opened by sfmig over 1 year ago - 4 comments
Labels: enhancement

#55 - Simple common coordinate system definition

Issue - State: open - Opened by sfmig over 1 year ago - 3 comments
Labels: enhancement

#54 - Add explicit Python 3.11 support in pyproject.toml

Issue - State: open - Opened by niksirbi over 1 year ago - 1 comment
Labels: enhancement

#53 - Updated dependencies in pyproject

Pull Request - State: closed - Opened by niksirbi over 1 year ago - 3 comments
Labels: bug

#52 - ensure backwards compatibility re config files

Issue - State: open - Opened by sfmig over 1 year ago

#51 - Docs are now set to deploy when a tag is pushed

Pull Request - State: closed - Opened by niksirbi over 1 year ago - 2 comments

#50 - Format project URLs to improve their appearance on PyPI

Pull Request - State: closed - Opened by niksirbi over 1 year ago - 1 comment

#49 - Format the `project.urls` entry

Issue - State: closed - Opened by adamltyson over 1 year ago
Labels: documentation, enhancement

#48 - Create API reference in the docs

Issue - State: open - Opened by niksirbi over 1 year ago
Labels: documentation

#47 - Release on conda-forge

Issue - State: open - Opened by niksirbi over 1 year ago
Labels: enhancement

#46 - Make first PyPI release

Issue - State: closed - Opened by niksirbi over 1 year ago - 1 comment
Labels: core feature

#45 - Add basic docs with sphinx

Pull Request - State: closed - Opened by niksirbi over 1 year ago - 7 comments
Labels: documentation, core feature

#44 - small additions to ROI tab

Issue - State: closed - Opened by sfmig over 1 year ago - 1 comment
Labels: enhancement

#43 - Enable users to create the project config via a graphical interface

Issue - State: open - Opened by niksirbi over 1 year ago - 5 comments
Labels: enhancement

#42 - updated github action versions

Pull Request - State: closed - Opened by niksirbi over 1 year ago

#41 - fixes to metadata tab

Issue - State: open - Opened by sfmig over 1 year ago

#40 - add ROI in the exported dataframe

Issue - State: closed - Opened by sfmig over 1 year ago - 1 comment
Labels: core feature

#39 - add offset from the event tags

Issue - State: open - Opened by sfmig over 1 year ago
Labels: enhancement

#38 - Add dashboard df export

Pull Request - State: closed - Opened by sfmig over 1 year ago - 2 comments

#37 - Add video page

Pull Request - State: closed - Opened by adamltyson over 1 year ago - 2 comments

#36 - Integration testing mechanics.

Pull Request - State: closed - Opened by samcunliffe over 1 year ago - 4 comments
Labels: task, enhancement

#35 - Drop support for python 3.8.

Issue - State: closed - Opened by samcunliffe over 1 year ago
Labels: task

#34 - Add csv import option

Pull Request - State: closed - Opened by sfmig over 1 year ago - 5 comments
Labels: enhancement, user feedback

#33 - Hosting data for testing

Issue - State: closed - Opened by sfmig over 1 year ago - 6 comments
Labels: core feature

#32 - Adding basic unit tests for wazp.utils.

Pull Request - State: closed - Opened by samcunliffe over 1 year ago - 11 comments

#31 - Also test in python 3.11.

Pull Request - State: closed - Opened by samcunliffe over 1 year ago - 1 comment

#30 - Use ruff instead of flake8 + isort

Issue - State: closed - Opened by niksirbi over 1 year ago - 5 comments
Labels: enhancement, upstream

#29 - Add dashboard and memory storage

Pull Request - State: closed - Opened by sfmig over 1 year ago - 9 comments

#28 - #16 - Add roi tool

Pull Request - State: closed - Opened by niksirbi over 1 year ago - 5 comments

#27 - webapp testing

Issue - State: closed - Opened by sfmig over 1 year ago - 2 comments
Labels: core feature

#26 - Dash/plotly webapp skeleton + metadata work

Pull Request - State: closed - Opened by sfmig over 1 year ago - 3 comments

#25 - Add sphinx documentation and deploy it on gh-pages

Issue - State: closed - Opened by niksirbi over 1 year ago - 1 comment
Labels: documentation

#24 - Document versioning workflow

Issue - State: open - Opened by niksirbi over 1 year ago
Labels: documentation

#23 - #12 exploring options to handle video metadata with json files

Pull Request - State: closed - Opened by sfmig over 1 year ago - 8 comments

#22 - #18 - add files created by SWC python-cookiecutter

Pull Request - State: closed - Opened by niksirbi over 1 year ago - 2 comments

#21 - add video (re)-encoding option

Issue - State: open - Opened by sfmig over 1 year ago - 3 comments
Labels: enhancement

#20 - #1 exploring streamlit dashboard

Pull Request - State: closed - Opened by sfmig over 1 year ago

#19 - Tagging events in videos

Issue - State: open - Opened by sfmig over 1 year ago - 7 comments
Labels: core feature, enhancement

#18 - Initially structure project based on SWC python cookiecutter

Issue - State: closed - Opened by niksirbi over 1 year ago
Labels: core feature

#17 - export analysed data

Issue - State: closed - Opened by sfmig over 1 year ago - 1 comment
Labels: core feature

#16 - implement a simple ROI configuration per video

Issue - State: closed - Opened by sfmig over 1 year ago - 3 comments
Labels: core feature

#15 - How are the videos split?

Issue - State: closed - Opened by samcunliffe over 1 year ago - 2 comments
Labels: question

#14 - Use of different pose estimation libraries

Issue - State: open - Opened by samcunliffe over 1 year ago
Labels: enhancement

#13 - Load in trained model and run pose estimation

Issue - State: open - Opened by samcunliffe over 1 year ago - 2 comments
Labels: core feature

#12 - Consider improvements to video metadata

Issue - State: closed - Opened by samcunliffe over 1 year ago - 7 comments
Labels: core feature

#11 - Improve definition of ROI

Issue - State: open - Opened by samcunliffe over 1 year ago - 7 comments
Labels: enhancement

#10 - Automatic semantic segmentation of ROIs

Issue - State: open - Opened by samcunliffe over 1 year ago
Labels: enhancement

#9 - Entry and exit analysis and visualisation

Issue - State: open - Opened by samcunliffe over 1 year ago
Labels: enhancement

#8 - Display plots of variables of interest

Issue - State: open - Opened by samcunliffe over 1 year ago - 1 comment
Labels: core feature

#7 - Should we combine the trajectory and the heatmap?

Issue - State: closed - Opened by samcunliffe over 1 year ago - 1 comment
Labels: question

GitHub / SainsburyWellcomeCentre/WAZP issues and pull requests