Ecosyste.ms: Issues

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GitHub / SCM-NV/qmflows issues and pull requests

#308 - Bump codecov/codecov-action from 3 to 4

Pull Request - State: open - Opened by dependabot[bot] 8 months ago
Labels: dependencies

#307 - Bump actions/upload-artifact from 3 to 4

Pull Request - State: open - Opened by dependabot[bot] 9 months ago - 1 comment
Labels: dependencies

#306 - Bump actions/setup-python from 4 to 5

Pull Request - State: open - Opened by dependabot[bot] 9 months ago - 1 comment
Labels: dependencies

#305 - TST: Enable tests for python 3.12

Pull Request - State: closed - Opened by BvB93 12 months ago - 1 comment
Labels: Tests

#304 - Bump actions/checkout from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago - 1 comment
Labels: dependencies

#303 - DOC: Fix documentation building

Pull Request - State: closed - Opened by BvB93 about 1 year ago - 1 comment
Labels: Documentation

#302 - BLD: Switch from setup.py to pyproject.toml

Pull Request - State: closed - Opened by BvB93 about 1 year ago - 1 comment

#301 - MAINT: General mainteance after the QMFlows 1.0.0b1 release

Pull Request - State: closed - Opened by BvB93 over 1 year ago - 1 comment
Labels: maintenance

#300 - ENH: QMFlows 1.0.0b1 release

Pull Request - State: closed - Opened by BvB93 over 1 year ago - 1 comment
Labels: enhancement

#299 - ENH: Add support for new CP2K potentials

Pull Request - State: closed - Opened by BvB93 over 1 year ago - 1 comment
Labels: enhancement

#298 - ENH: Add two new fields to CP2K MO named tuple

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 1 comment
Labels: enhancement

#297 - TST: Redirect test stdout to the qmflows logger and re-enable sphinx tests

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 1 comment
Labels: Tests

#296 - ENH: Make the CP2K orbital parser more robust for unrestricted calculations

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 1 comment
Labels: enhancement

#294 - TST: Improve test coverage

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 1 comment
Labels: Tests

#293 - MAINT, DEP: Restructure the various `qmflows` sub packages

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 1 comment
Labels: maintenance

#292 - BUG: Remove MO padding when the requested MO range is larger than the number of available MOs

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 1 comment
Labels: bug

#291 - ENH: Add support for parsing CP2K basis sets consisting of multiple exponent sets

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 1 comment
Labels: enhancement

#290 - MAINT: Do not extract the CP2K version via `cp2k.popt --version`

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 1 comment

#289 - BLD: Try removing the upper version bound of `pyparsing`

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 2 comments

#288 - DEP: Vendor a copy of `distutils.spawn.find_executable`

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 1 comment

#287 - TST: Move linting checks to their own dedicated workflow

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 1 comment
Labels: Tests

#286 - BLD: Remove the upper version bound of noodles

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 1 comment

#285 - REV: Remove the `AtomBasisKey.alias` field again

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 1 comment

#284 - BUG: Ensure that basis set coefficients are transposed

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 1 comment
Labels: bug

#283 - ENH: Print the basis set name and line number whenever failing to read a CP2K basis set file

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 1 comment
Labels: enhancement

#282 - ENH: Rework the CP2K basis set parser

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 1 comment
Labels: enhancement

#281 - TST: Print the CP2K .out and .err files whenever a test job crashes

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 1 comment
Labels: Tests

#280 - ENH: Add the generic `basis` and `potential` keys for CP2K

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 1 comment
Labels: enhancement

#279 - ENH: Add `Result.__dir__`

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 1 comment
Labels: enhancement

#278 - ENH: Add a frequency analysis template for CP2K

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 1 comment
Labels: enhancement

#277 - TST: Add CP2K 9.1 tests

Pull Request - State: closed - Opened by BvB93 over 2 years ago - 1 comment
Labels: Tests

#276 - MAINT: Update `master` branch after release (0.11.0)

Pull Request - State: closed - Opened by BvB93 almost 3 years ago - 1 comment
Labels: maintenance

#275 - REL: Release QMFlows 0.11.0

Pull Request - State: closed - Opened by BvB93 almost 3 years ago - 1 comment

#274 - MAINT: Recognize `Band gap` as a valid footer in the CP2K >=8.2 MOLog

Pull Request - State: closed - Opened by BvB93 almost 3 years ago - 1 comment

#273 - MAINT: Allow the CP2K executable to contain spaces

Pull Request - State: closed - Opened by BvB93 almost 3 years ago - 1 comment

#272 - MAINT: Make the CP2K >= 8.2 orbital parser more robust

Pull Request - State: closed - Opened by BvB93 almost 3 years ago - 1 comment

#271 - TST: Add a CI run for CP2K 8.2

Pull Request - State: closed - Opened by BvB93 almost 3 years ago - 1 comment
Labels: Tests

#270 - BUG: Fixed an issue wherein `init_restart`/`InitRestart` could fail on consecutive calls

Pull Request - State: closed - Opened by BvB93 almost 3 years ago - 1 comment
Labels: bug, Tests

#269 - TST: Fix the codecov coverage

Issue - State: closed - Opened by BvB93 almost 3 years ago - 1 comment
Labels: Tests

#268 - TST: Add a dedicated CI run for slow jobs

Pull Request - State: closed - Opened by BvB93 almost 3 years ago - 1 comment
Labels: Tests

#267 - TST: Check if `sudo apt update` shows new cp2k versions

Pull Request - State: closed - Opened by BvB93 almost 3 years ago

#266 - MAINT: Make the regex pattern for finding the CP2K executable more robust

Pull Request - State: closed - Opened by BvB93 almost 3 years ago - 1 comment

#265 - BUG: Allow the `mpirun`/`srun` commands to have a prefix when parsing PLAMS .run files

Pull Request - State: closed - Opened by BvB93 almost 3 years ago - 1 comment
Labels: bug

#264 - MAINT: Extract the CP2K version from the PLAMS .run file

Pull Request - State: closed - Opened by BvB93 almost 3 years ago - 1 comment

#263 - MAINT: Account for the different .MOLog structure of CP2K >= 8.2

Pull Request - State: closed - Opened by BvB93 almost 3 years ago - 1 comment

#262 - TST: List CP2K versions

Pull Request - State: closed - Opened by BvB93 almost 3 years ago - 1 comment

#261 - BUG: Account for the `MO|` prefix when reading orbitals in CP2K >= 8.2

Pull Request - State: closed - Opened by BvB93 almost 3 years ago - 1 comment
Labels: bug

#260 - MAINT: Up the stacklevel of `Result.__getattr__` warnings

Pull Request - State: closed - Opened by BvB93 almost 3 years ago - 1 comment

#259 - TYP: Update type annotations

Pull Request - State: closed - Opened by BvB93 almost 3 years ago - 1 comment

#258 - BUG: Resolve `cp2k_mm` failing to parse `settings.executable`

Pull Request - State: closed - Opened by BvB93 almost 3 years ago - 1 comment
Labels: bug

#257 - TST: Add tests for Python 3.10

Pull Request - State: closed - Opened by BvB93 almost 3 years ago - 2 comments
Labels: Tests

#256 - MAINT: Clean up the template and RDKit lazy loading

Pull Request - State: closed - Opened by BvB93 almost 3 years ago - 1 comment

#255 - TST: Re-enable the CP2K tests

Pull Request - State: closed - Opened by BvB93 about 3 years ago - 1 comment
Labels: Tests

#254 - BLD: Add a GitHub Actions workflow for automatic PyPi publishing

Pull Request - State: closed - Opened by BvB93 about 3 years ago - 1 comment

#253 - DOC: Build the readthedocs `epub` format instead of `pdf`

Pull Request - State: closed - Opened by BvB93 about 3 years ago - 1 comment
Labels: Documentation

#252 - DOC: Disable the RTD epub format

Pull Request - State: closed - Opened by BvB93 about 3 years ago - 1 comment
Labels: Documentation

#251 - DOC: Install `jupyter`-related dependencies via conda when building docs

Pull Request - State: closed - Opened by BvB93 about 3 years ago - 1 comment
Labels: Documentation

#250 - Re-enable the CP2K tests

Issue - State: closed - Opened by BvB93 about 3 years ago
Labels: Tests

#249 - ENH: Make RDKit an optional dependency for python >= 3.7

Pull Request - State: closed - Opened by BvB93 about 3 years ago - 1 comment
Labels: enhancement

#248 - ENH: Add a generic keyword for the CP2K `GAL19` non-bonded forcefield

Pull Request - State: closed - Opened by BvB93 about 3 years ago - 1 comment
Labels: enhancement

#247 - REV: Reintroduce support for python 3.6

Pull Request - State: closed - Opened by BvB93 about 3 years ago - 1 comment

#246 - ENH: Ensure that the qmflows templates are always copied

Pull Request - State: closed - Opened by BvB93 over 3 years ago - 1 comment
Labels: enhancement

#245 - ENH: Add new `yaml` loaders with duplicate key checking

Pull Request - State: closed - Opened by BvB93 over 3 years ago - 1 comment
Labels: enhancement

#244 - MAINT: Remove the 2-digit restriction from CP2K cell parameters

Pull Request - State: closed - Opened by BvB93 over 3 years ago - 1 comment

#243 - Print CP2K cell parameters with more significant digits

Issue - State: closed - Opened by felipeZ over 3 years ago

#242 - BUG: Fixed an issue where reading pressures could fail for cp2k <8.0

Pull Request - State: closed - Opened by BvB93 over 3 years ago - 2 comments
Labels: bug

#241 - ENH: Add the new `pressure` generic property to `cp2k_mm`

Pull Request - State: closed - Opened by BvB93 over 3 years ago - 1 comment
Labels: enhancement

#240 - MAINT: Use `o_spline = 4` for all other `cp2k_mm` the templates

Pull Request - State: closed - Opened by BvB93 almost 4 years ago - 1 comment

#239 - ENH: Add a template for cell optimization calculation

Pull Request - State: closed - Opened by BvB93 almost 4 years ago - 1 comment
Labels: enhancement

#238 - ENH: Allow the generic `cell_parameters` keyword to take any array-like object

Pull Request - State: closed - Opened by BvB93 almost 4 years ago - 1 comment
Labels: enhancement

#237 - ENH: Added the new `lattice` property to `CP2K_Result`

Pull Request - State: closed - Opened by BvB93 almost 4 years ago - 2 comments
Labels: enhancement

#236 - ENH: Add 4 new properties to `CP2K_Result`

Pull Request - State: closed - Opened by BvB93 almost 4 years ago - 1 comment
Labels: enhancement

#235 - Fixed an issue where `CP2KMM_Result` did not inherit from `CP2K_Result`

Pull Request - State: closed - Opened by BvB93 almost 4 years ago - 1 comment

#233 - BUG: Fixed an issue where `Result.__getattr__` could fail

Pull Request - State: closed - Opened by BvB93 almost 4 years ago - 2 comments
Labels: bug

#232 - MAINT: Remove the cell parameters from the `cp2k_mm` templates

Pull Request - State: closed - Opened by BvB93 almost 4 years ago - 1 comment

#231 - Do not use the CP2K `USE_ELEMENT_AS_KIND` keyword

Pull Request - State: closed - Opened by BvB93 almost 4 years ago - 3 comments

#230 - Add the `validate_output` keyword to `Package`

Pull Request - State: closed - Opened by BvB93 almost 4 years ago - 1 comment
Labels: enhancement

#229 - Relax the PLAMS version requirement

Pull Request - State: closed - Opened by BvB93 almost 4 years ago - 1 comment

#228 - removed all the unused block_replace functionality

Pull Request - State: closed - Opened by felipeZ almost 4 years ago - 1 comment

#227 - ADF template default cause problems

Issue - State: closed - Opened by felipeZ almost 4 years ago - 3 comments
Labels: bug

#226 - Make `Package` instances compatible with `builtins.function`

Pull Request - State: closed - Opened by BvB93 almost 4 years ago - 4 comments
Labels: enhancement

#225 - Fix the `test_cp2k_singlepoint_mock` test

Issue - State: closed - Opened by BvB93 almost 4 years ago - 1 comment
Labels: Tests

#224 - Fixed an issue where an `ResultWrapper` parameters were incorrectly ordered

Pull Request - State: closed - Opened by BvB93 almost 4 years ago - 1 comment
Labels: bug

#223 - Add tests for python 3.9

Pull Request - State: closed - Opened by BvB93 almost 4 years ago - 11 comments
Labels: Tests

#222 - removed mocker from import

Pull Request - State: closed - Opened by felipeZ almost 4 years ago - 7 comments

#221 - Add tests for Python 3.9

Issue - State: closed - Opened by BvB93 almost 4 years ago - 1 comment
Labels: enhancement, Tests

#220 - Add tests for python 3.9

Issue - State: closed - Opened by BvB93 almost 4 years ago
Labels: enhancement, Tests

#219 - Make mention of package-specific environment variables somewhere

Issue - State: open - Opened by BvB93 almost 4 years ago
Labels: enhancement, Documentation

#218 - used either HOMO-LUMO or Fermi keywords to split cp2k orbitals

Pull Request - State: closed - Opened by felipeZ almost 4 years ago - 1 comment

#217 - Cp2k unrestricted

Pull Request - State: closed - Opened by felipeZ almost 4 years ago - 1 comment

#216 - Cp2k unrestricted

Pull Request - State: closed - Opened by felipeZ almost 4 years ago - 1 comment

#215 - check that the orbitals for unrestricted calculations is created

Pull Request - State: closed - Opened by felipeZ about 4 years ago - 1 comment

#214 - use the CP2K spin states information to parse the output

Pull Request - State: closed - Opened by felipeZ about 4 years ago - 1 comment

#213 - solve CP2K parsing issue

Pull Request - State: closed - Opened by felipeZ about 4 years ago - 1 comment

#212 - CP2K unordered molecular orbital coefficients

Issue - State: closed - Opened by felipeZ about 4 years ago

#211 - Read alpha and beta orbitals from cp2k unrestricted calculations

Issue - State: closed - Opened by felipeZ about 4 years ago
Labels: enhancement

#210 - improve cp2k error report

Pull Request - State: closed - Opened by felipeZ about 4 years ago - 1 comment

#209 - Improve CP2K parser error

Issue - State: closed - Opened by felipeZ about 4 years ago - 1 comment

#208 - setup of calling packages

Issue - State: closed - Opened by houzf about 4 years ago - 2 comments
Labels: help wanted