Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / RickGelhausen/HRIBO issues and pull requests

#57 - Readme/Template

Issue - State: closed - Opened by jfallmann 2 months ago - 1 comment

#56 - Readme git repo path

Issue - State: closed - Opened by jfallmann 2 months ago - 1 comment

#55 - Dependencies issues - environment.yaml

Issue - State: closed - Opened by FranckS 6 months ago - 5 comments

#54 - Updated to version 1.7.0

Pull Request - State: closed - Opened by RickGelhausen over 1 year ago

#53 - Differential expression

Pull Request - State: closed - Opened by RickGelhausen about 2 years ago

#52 - Differential expression

Pull Request - State: closed - Opened by RickGelhausen over 2 years ago

#51 - Mergefix

Pull Request - State: closed - Opened by RickGelhausen about 3 years ago

#50 - Paired end metagene-profiling support

Issue - State: open - Opened by RickGelhausen over 3 years ago

#49 - Add testing / linting

Issue - State: open - Opened by eggzilla over 3 years ago

#48 - Metamax

Pull Request - State: closed - Opened by eggzilla over 3 years ago

#47 - Lib reorganisation and pip config

Pull Request - State: closed - Opened by eggzilla over 3 years ago

#46 - TTS support

Issue - State: closed - Opened by RickGelhausen almost 4 years ago - 1 comment

#45 - Dev1.4.3

Pull Request - State: closed - Opened by RickGelhausen over 4 years ago

#43 - Dev1.4.0

Pull Request - State: closed - Opened by RickGelhausen over 4 years ago

#42 - Dev1.4.0snp

Pull Request - State: closed - Opened by eggzilla over 4 years ago

#41 - Logo

Pull Request - State: closed - Opened by eggzilla over 4 years ago - 1 comment
Labels: enhancement

#40 - Configsnake

Pull Request - State: closed - Opened by RickGelhausen over 4 years ago

#39 - Deepribo intigration

Pull Request - State: closed - Opened by RickGelhausen over 4 years ago

#38 - Rename supplementary/metagene in reports

Issue - State: closed - Opened by eggzilla over 4 years ago

#37 - Removed ribotish from snakefiles,rules and envs

Pull Request - State: closed - Opened by eggzilla over 4 years ago - 1 comment
Labels: enhancement, workinprogress

#36 - Bump version number and changelog

Issue - State: closed - Opened by eggzilla over 4 years ago - 2 comments

#35 - cluster template files

Issue - State: closed - Opened by RickGelhausen over 4 years ago - 1 comment

#34 - Mg

Pull Request - State: closed - Opened by eggzilla over 4 years ago

#33 - templates

Issue - State: closed - Opened by RickGelhausen over 4 years ago - 2 comments

#32 - clean Snakefiles

Issue - State: closed - Opened by RickGelhausen over 4 years ago

#31 - config.yaml

Issue - State: closed - Opened by RickGelhausen over 4 years ago - 3 comments

#30 - allow custom annotation/genome file naming

Issue - State: closed - Opened by RickGelhausen over 4 years ago
Labels: enhancement

#29 - Use of temp

Issue - State: closed - Opened by RickGelhausen over 4 years ago - 1 comment
Labels: enhancement

#28 - Add rule to gather final results in .zip

Issue - State: open - Opened by RickGelhausen over 4 years ago - 1 comment
Labels: enhancement

#27 - gene synteny

Issue - State: open - Opened by RickGelhausen about 5 years ago
Labels: enhancement, user request

#26 - Clean folder structure

Issue - State: closed - Opened by RickGelhausen about 5 years ago - 1 comment
Labels: enhancement

#25 - Replace gffread

Issue - State: closed - Opened by RickGelhausen about 5 years ago - 3 comments
Labels: enhancement

#24 - optional SortMeRNA

Issue - State: closed - Opened by RickGelhausen about 5 years ago - 1 comment
Labels: enhancement

#23 - Rrnafiltering

Pull Request - State: closed - Opened by eggzilla about 5 years ago

#22 - reparation is non-deterministic

Issue - State: closed - Opened by RickGelhausen about 5 years ago - 1 comment
Labels: bug

#21 - Check annotation coordinates

Issue - State: closed - Opened by eggzilla over 5 years ago - 2 comments

#20 - added rule for read count generation

Pull Request - State: closed - Opened by RickGelhausen over 5 years ago

#19 - combined gff will now be annotated

Pull Request - State: closed - Opened by RickGelhausen over 5 years ago

#18 - update sge.yaml

Issue - State: closed - Opened by RickGelhausen over 5 years ago

#17 - additional requests

Issue - State: closed - Opened by RickGelhausen over 5 years ago - 3 comments
Labels: enhancement, user request

#16 - rework ribotish

Issue - State: closed - Opened by RickGelhausen over 5 years ago
Labels: bug

#15 - switch for trim-galore to cutadapt

Issue - State: closed - Opened by RickGelhausen over 5 years ago - 1 comment
Labels: bug

#14 - metagene analysis

Issue - State: closed - Opened by RickGelhausen over 5 years ago - 2 comments
Labels: enhancement

#13 - mapping

Issue - State: closed - Opened by RickGelhausen over 5 years ago - 3 comments
Labels: enhancement

#12 - create excel files

Issue - State: closed - Opened by RickGelhausen over 5 years ago - 3 comments
Labels: enhancement

#11 - rework tracks folder

Issue - State: closed - Opened by RickGelhausen over 5 years ago - 1 comment
Labels: enhancement

#10 - update config file

Issue - State: closed - Opened by RickGelhausen over 5 years ago - 1 comment
Labels: enhancement

#9 - Make config file entries for motifs2gff tracks

Issue - State: closed - Opened by eggzilla over 5 years ago
Labels: enhancement

#8 - Added concatReparation.py, Added input dependency in reparation rule

Pull Request - State: closed - Opened by RickGelhausen almost 6 years ago

#7 - Unique

Pull Request - State: closed - Opened by eggzilla about 6 years ago

#6 - Quality

Pull Request - State: closed - Opened by eggzilla about 6 years ago

#5 - Snakemake nomulti

Pull Request - State: closed - Opened by RickGelhausen about 6 years ago

#4 - Reparation

Pull Request - State: closed - Opened by RickGelhausen about 6 years ago

#3 - Added reparation_merge script

Pull Request - State: closed - Opened by RickGelhausen about 6 years ago

#2 - Ribotishmerge

Pull Request - State: closed - Opened by eggzilla about 6 years ago

#1 - Multiconditions

Pull Request - State: closed - Opened by eggzilla about 6 years ago