Ecosyste.ms: Issues

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GitHub / RhodiumGroup/rhg_compute_tools issues and pull requests

#111 - Fix need for storage.bucket.get GCS permissions

Pull Request - State: closed - Opened by brews over 1 year ago - 4 comments

#110 - gcs.cp does not work for sources not mounted on fuse

Issue - State: open - Opened by delgadom over 1 year ago

#109 - bugfix in gcs.cp: src_gs should start with gs://

Pull Request - State: open - Opened by delgadom over 1 year ago

#108 - fix & test xarray module

Pull Request - State: closed - Opened by delgadom over 2 years ago

#107 - Document dataset

Pull Request - State: closed - Opened by delgadom over 2 years ago

#106 - pull in whitespace changes from master

Pull Request - State: closed - Opened by delgadom over 2 years ago

#105 - normalize whitespace in doctests

Pull Request - State: closed - Opened by delgadom over 2 years ago

#104 - raise for nonzero gsutil status code in cp

Pull Request - State: closed - Opened by delgadom over 2 years ago

#103 - Add client_kwargs option and fix datasets_from_delayed

Pull Request - State: open - Opened by bolliger32 almost 3 years ago - 3 comments

#102 - add dask kwargs

Pull Request - State: closed - Opened by bolliger32 over 3 years ago - 1 comment

#101 - Retry wrapper

Pull Request - State: closed - Opened by bolliger32 over 3 years ago

#100 - add retry func

Pull Request - State: closed - Opened by bolliger32 over 3 years ago - 2 comments

#99 - extra conda packages kwarg fails with dask gateway

Issue - State: open - Opened by dgergel over 3 years ago - 2 comments

#98 - Figure out how to use RHG fonts/styles

Issue - State: open - Opened by bolliger32 over 3 years ago - 2 comments
Labels: enhancement

#97 - drop matplotlib rebuild() call in deign.__init__

Pull Request - State: closed - Opened by delgadom over 3 years ago - 2 comments

#96 - mpl 3.4 drops `font_manager._rebuild()` function and breaks `design` imports

Issue - State: closed - Opened by bolliger32 over 3 years ago - 1 comment

#95 - speed up metadata pulls

Pull Request - State: closed - Opened by bolliger32 over 3 years ago
Labels: enhancement

#94 - Cool little

Pull Request - State: closed - Opened by bolliger32 over 3 years ago

#93 - Fix the way the `tag` kwarg is handled in `get_cluster

Pull Request - State: closed - Opened by bolliger32 over 3 years ago

#92 - test gh actions

Pull Request - State: closed - Opened by bolliger32 almost 4 years ago

#91 - efficient-geopandas-nearest-neighbor

Issue - State: closed - Opened by delgadom almost 4 years ago - 5 comments

#90 - Add cluster scale-up blocking "wait" function

Pull Request - State: open - Opened by delgadom almost 4 years ago

#89 - Minor fix to contradicting flake8 config rule

Pull Request - State: closed - Opened by brews about 4 years ago

#87 - Add dask-gateway compatibility

Pull Request - State: closed - Opened by bolliger32 about 4 years ago - 6 comments

#86 - rhg_compute_tools.gcs.cp might not always do what we expect

Issue - State: open - Opened by bolliger32 about 4 years ago - 2 comments

#85 - add alternative combining methods to rct.xarray.*_from_delayed

Issue - State: open - Opened by bolliger32 about 4 years ago - 2 comments
Labels: enhancement, good first issue

#84 - address strange memory blowup with rhg_compute_tools.xarray.dataarrays_from_delayed

Pull Request - State: closed - Opened by bolliger32 about 4 years ago - 3 comments

#83 - rhg_compute_tools.xarray.dataarrays_from_delayed can blow up memory

Issue - State: closed - Opened by bolliger32 about 4 years ago
Labels: bug

#82 - Drop pytest-runner use

Issue - State: open - Opened by brews about 4 years ago

#81 - switch bumpversion to setuptools_scm

Pull Request - State: closed - Opened by brews about 4 years ago - 4 comments
Labels: enhancement

#80 - add tag argument to get_cluster

Pull Request - State: closed - Opened by delgadom about 4 years ago - 6 comments

#79 - getting clusters is confusing af

Issue - State: closed - Opened by delgadom about 4 years ago

#78 - switch from bumpversion to setuptools_scm

Issue - State: closed - Opened by delgadom about 4 years ago - 2 comments
Labels: enhancement

#77 - enforce isort and black in tests

Issue - State: closed - Opened by bolliger32 about 4 years ago - 2 comments

#76 - isort everything + 1 change

Pull Request - State: closed - Opened by bolliger32 about 4 years ago - 4 comments

#75 - Couple of bugs in kubernetes.py

Issue - State: closed - Opened by bolliger32 about 4 years ago - 2 comments
Labels: bug

#74 - run black everywhere

Pull Request - State: closed - Opened by delgadom about 4 years ago - 1 comment

#73 - Clean up C/I: drop tox & py27

Pull Request - State: closed - Opened by delgadom about 4 years ago - 1 comment

#72 - Revert

Pull Request - State: closed - Opened by delgadom about 4 years ago

#71 - Autofmt

Pull Request - State: closed - Opened by bolliger32 about 4 years ago - 3 comments
Labels: enhancement

#70 - make gsutil API consistent

Pull Request - State: closed - Opened by bolliger32 about 4 years ago - 2 comments

#69 - Inconsistency in API for different gsutil commpands

Issue - State: closed - Opened by bolliger32 about 4 years ago

#68 - Add globals blocker

Pull Request - State: closed - Opened by delgadom over 4 years ago

#67 - move fixtures into separate module

Pull Request - State: closed - Opened by delgadom over 4 years ago

#66 - CI broken: pytest raises "fixture applied more than once"

Issue - State: closed - Opened by delgadom over 4 years ago

#65 - modify dict implementation, fix typo

Pull Request - State: closed - Opened by dallen5 over 4 years ago - 4 comments

#64 - Setting environment variables on remote cluster does not work

Issue - State: closed - Opened by dallen5 over 4 years ago

#63 - Add a "make gcs fuse directories in place" function

Issue - State: open - Opened by delgadom over 4 years ago - 1 comment

#62 - add globals blocker

Issue - State: closed - Opened by delgadom over 4 years ago - 3 comments

#61 - merge branch master in to branch pod-labels-tolerations

Pull Request - State: closed - Opened by delgadom over 4 years ago

#60 - use gsutil for rm

Pull Request - State: closed - Opened by bolliger32 over 4 years ago - 2 comments

#59 - fix gcs.rm

Issue - State: closed - Opened by bolliger32 over 4 years ago

#58 - Allow labels and tolerations in get_cluster

Pull Request - State: closed - Opened by delgadom over 4 years ago

#56 - add simple caching utility

Issue - State: open - Opened by delgadom almost 5 years ago - 3 comments

#55 - integrate remote scheduler

Pull Request - State: closed - Opened by bolliger32 almost 5 years ago - 4 comments

#54 - add a blocking_pbar

Issue - State: closed - Opened by delgadom almost 5 years ago - 1 comment

#53 - add cluster spinup & job management utilities

Issue - State: open - Opened by delgadom almost 5 years ago - 3 comments

#52 - Alternative approach to enable alt GCS auth

Pull Request - State: closed - Opened by brews about 5 years ago - 3 comments
Labels: bug, enhancement

#50 - Fix CLI docstring typo

Pull Request - State: closed - Opened by delgadom about 5 years ago

#49 - Enable alternate forms of authentication

Pull Request - State: closed - Opened by delgadom about 5 years ago - 3 comments
Labels: bug, enhancement

#48 - Add CLI for `replicate_directory_structure_on_gcs()`

Pull Request - State: closed - Opened by brews about 5 years ago - 3 comments
Labels: bug, enhancement

#47 - Drop refs to py2 support

Issue - State: closed - Opened by brews about 5 years ago - 1 comment
Labels: bug

#46 - Update package classifiers in setup.py

Issue - State: closed - Opened by brews about 5 years ago - 1 comment
Labels: bug

#45 - Add `replicate_directory_structure_on_gcs()` to HISTORY

Issue - State: closed - Opened by brews about 5 years ago
Labels: bug

#44 - Add actual FutureWarning or DeprecationWarning for deprecations

Issue - State: open - Opened by brews about 5 years ago - 1 comment
Labels: enhancement

#43 - HISTORY.rst is missing several releases

Issue - State: closed - Opened by brews about 5 years ago
Labels: bug

#42 - Add function replicate_directory_structure_on_gcs

Pull Request - State: closed - Opened by delgadom about 5 years ago - 5 comments

#41 - Add rm

Pull Request - State: closed - Opened by bolliger32 about 5 years ago - 8 comments

#40 - kubectl tools

Issue - State: open - Opened by delgadom about 5 years ago

#39 - Design bugfix

Pull Request - State: closed - Opened by delgadom over 5 years ago

#38 - Switch back to the dask kubecluster

Pull Request - State: closed - Opened by delgadom over 5 years ago

#37 - Add command line gcs tools

Issue - State: closed - Opened by delgadom over 5 years ago - 3 comments
Labels: enhancement

#36 - Switch MyKubeCluster to dask_kubernetes.KubeCluster

Pull Request - State: closed - Opened by delgadom over 5 years ago - 1 comment

#35 - KubeCluster.adapt() does not work

Issue - State: closed - Opened by delgadom over 5 years ago

#34 - add design tools

Pull Request - State: closed - Opened by delgadom over 5 years ago

#33 - variables to excel

Issue - State: open - Opened by delgadom over 5 years ago

#32 - add cred_name argument to create_cluster

Pull Request - State: closed - Opened by delgadom over 5 years ago

#31 - allow token name instead of full credentials path

Issue - State: closed - Opened by delgadom over 5 years ago

#30 - Design tools

Issue - State: closed - Opened by delgadom over 5 years ago - 2 comments

#29 - deprecate utils in favor of parameterize_jobs

Issue - State: open - Opened by delgadom over 5 years ago

#28 - get rid of lambdas in xarray utils

Issue - State: open - Opened by delgadom almost 6 years ago

#27 - update sync_gcs cp_gcs to go bidirectional

Pull Request - State: closed - Opened by bolliger32 almost 6 years ago

#26 - add sync_to_gcs tool

Pull Request - State: closed - Opened by bolliger32 almost 6 years ago

#25 - Subclass distributed.deploy.adapt.Adaptive to fix autoscaling

Pull Request - State: closed - Opened by delgadom almost 6 years ago

#24 - spin down workers as tasks finish

Issue - State: closed - Opened by delgadom almost 6 years ago - 1 comment

#23 - fix single file cp bug and add cp flags

Pull Request - State: closed - Opened by bolliger32 almost 6 years ago

#22 - allow for flags in cp_to_gcs

Issue - State: closed - Opened by bolliger32 almost 6 years ago - 1 comment

#21 - get_cluster and children don't work

Issue - State: closed - Opened by delgadom almost 6 years ago

#20 - bug fix in kubernetes.get_cluster

Pull Request - State: closed - Opened by delgadom almost 6 years ago

#19 - Allow grouped options in collapse_product

Issue - State: closed - Opened by delgadom almost 6 years ago - 1 comment

#18 - Xarray

Pull Request - State: closed - Opened by delgadom almost 6 years ago

#13 - Improve cluster management tools

Issue - State: open - Opened by delgadom almost 6 years ago - 6 comments

#12 - add xarray_from_delayed

Issue - State: closed - Opened by delgadom almost 6 years ago

#11 - make gsutil cp wrapper to quickly do recursive copy

Issue - State: closed - Opened by bolliger32 about 6 years ago

#10 - Update cp to gcs

Pull Request - State: closed - Opened by bolliger32 about 6 years ago - 8 comments

#7 - allow for env variable additions for get_worker and add traceback func

Pull Request - State: closed - Opened by bolliger32 about 6 years ago - 3 comments