Rappsilber-Laboratory/xiRT issues and pull requests

#44 - if learning_params["train"]["mode"] == "train": KeyError: 'train'

Issue - State: open - Opened by wjlong0318 9 months ago - 4 comments

#43 - Update parameters.rst

Pull Request - State: closed - Opened by ludsinn over 3 years ago

#42 - Update results.rst

Pull Request - State: closed - Opened by ludsinn over 3 years ago

#41 - Update usage.rst

Pull Request - State: closed - Opened by ludsinn over 3 years ago

#40 - Update usage.rst

Pull Request - State: closed - Opened by ludsinn over 3 years ago

#39 - simplify repository

Pull Request - State: closed - Opened by gieses over 3 years ago

#38 - Add UMAP plots to xiRT codebase

Issue - State: open - Opened by gieses over 3 years ago

#37 - Parameter Improvements

Pull Request - State: closed - Opened by gieses over 3 years ago

#36 - Bump bleach from 3.1.5 to 3.3.0

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#35 - add versioneer

Pull Request - State: closed - Opened by gieses over 3 years ago

#34 - Add parameter (pretrained_model to learning yaml config). This allo…

Pull Request - State: closed - Opened by gieses over 3 years ago - 1 comment

#33 - Revert "Revert "transfer-fractions""

Pull Request - State: closed - Opened by gieses over 3 years ago

#32 - Revert "transfer-fractions"

Pull Request - State: closed - Opened by gieses over 3 years ago

#31 - transfer-fractions

Pull Request - State: closed - Opened by gieses over 3 years ago - 1 comment

#30 - [WIP] Sda + utils additions

Pull Request - State: closed - Opened by gieses over 3 years ago

#29 - Xirt modes

Pull Request - State: closed - Opened by gieses almost 4 years ago

#28 - add basic logger with progress and meta informatio

Pull Request - State: closed - Opened by gieses almost 4 years ago
Labels: enhancement

#27 - Implement Augmentation:

Issue - State: open - Opened by gieses almost 4 years ago
Labels: enhancement

#26 - Implements pseudo linear option to use linear strategy for crosslinks.

Pull Request - State: closed - Opened by gieses almost 4 years ago

#25 - noncovalent

Issue - State: open - Opened by gieses almost 4 years ago
Labels: enhancement

#24 - fix snakemake workflow and tests / doku

Pull Request - State: closed - Opened by gieses almost 4 years ago

#23 - cv evaluation

Issue - State: closed - Opened by gieses almost 4 years ago - 1 comment
Labels: bug

#22 - Add qc plots

Pull Request - State: closed - Opened by gieses almost 4 years ago

#21 - - fixed usage of crosslinked residues

Pull Request - State: closed - Opened by gieses almost 4 years ago

#20 - Enhance readme and pypi site

Pull Request - State: closed - Opened by gieses almost 4 years ago

#19 - Rolling dev 1

Pull Request - State: closed - Opened by gieses almost 4 years ago

#18 - Rolling dev 1

Pull Request - State: closed - Opened by gieses almost 4 years ago

#17 - test fix for readthedocs

Pull Request - State: closed - Opened by gieses almost 4 years ago

#16 - version bumb

Pull Request - State: closed - Opened by gieses almost 4 years ago - 1 comment

#15 - Rolling dev 1

Pull Request - State: closed - Opened by gieses almost 4 years ago

#14 - change links from old repository to new one

Pull Request - State: closed - Opened by gieses almost 4 years ago

#13 - Create python-package.yml

Pull Request - State: closed - Opened by gieses almost 4 years ago

#12 - Rolling dev

Pull Request - State: closed - Opened by gieses almost 4 years ago

#11 - Rolling dev

Pull Request - State: closed - Opened by gieses almost 4 years ago - 1 comment

#10 - Rolling dev

Pull Request - State: closed - Opened by gieses almost 4 years ago - 1 comment

#9 - fix links and try sourcery suggestion

Pull Request - State: closed - Opened by gieses almost 4 years ago - 1 comment

#8 - Rolling dev (Sourcery refactored)

Pull Request - State: closed - Opened by sourcery-ai[bot] almost 4 years ago - 1 comment

#7 - Rolling dev

Pull Request - State: closed - Opened by gieses almost 4 years ago - 1 comment

#6 - Rolling dev

Pull Request - State: closed - Opened by gieses almost 4 years ago

#5 - Rolling dev

Pull Request - State: closed - Opened by gieses almost 4 years ago

#4 - Update dev branch

Pull Request - State: closed - Opened by gieses almost 4 years ago

#3 - Fixing further tests, now at 90% coverage

Pull Request - State: closed - Opened by gieses almost 4 years ago

#2 - Rolling dev

Pull Request - State: closed - Opened by gieses almost 4 years ago

#1 - Rolling dev

Pull Request - State: closed - Opened by gieses almost 4 years ago

GitHub / Rappsilber-Laboratory/xiRT issues and pull requests