Radiobiology-Informatics-Consortium/RBO issues and pull requests

#204 - NTR radiation field

Issue - State: open - Opened by DanBerrios about 1 year ago
Labels: new: awaiting discussion in meeting

#203 - Fix typo on heavy ion

Pull Request - State: closed - Opened by DanBerrios about 1 year ago

#202 - Merge for release 01-11-2024

Pull Request - State: closed - Opened by DanBerrios about 1 year ago

#201 - Move alpha and beta decay to be children of radioactive decay

Issue - State: closed - Opened by DanBerrios about 1 year ago - 1 comment
Labels: implemented: confirmed & ready for release

#200 - NTR space radiation field

Issue - State: open - Opened by jmskip about 1 year ago - 1 comment
Labels: new: awaiting discussion in meeting

#199 - standardise annotation properties in templates

Issue - State: open - Opened by reality about 1 year ago - 1 comment

#199 - standardise annotation properties in templates

Issue - State: open - Opened by reality about 1 year ago - 1 comment
Labels: accepted: awaiting implementation in ontology

#198 - Add Alt label to Radiobiology study type

Issue - State: closed - Opened by PaulNSchofield over 1 year ago
Labels: implemented: confirmed & ready for release

#197 - NTR multiple ion sequential irradiation study

Issue - State: closed - Opened by PaulNSchofield over 1 year ago - 1 comment
Labels: implemented: confirmed & ready for release

#196 - multiple ion simultaneous irradiation study

Issue - State: closed - Opened by PaulNSchofield over 1 year ago - 1 comment
Labels: implemented: confirmed & ready for release

#195 - NTR multiple ion irradiation study

Issue - State: closed - Opened by PaulNSchofield over 1 year ago
Labels: implemented: confirmed & ready for release

#194 - NTR mixed ion and photon sequential irradiation study

Issue - State: closed - Opened by PaulNSchofield over 1 year ago - 1 comment
Labels: implemented: confirmed & ready for release

#193 - NTR Mixed ion and photon simultaneous irradiation study

Issue - State: closed - Opened by PaulNSchofield over 1 year ago - 1 comment
Labels: implemented: confirmed & ready for release

#192 - Multiple ion irradiation study

Issue - State: closed - Opened by PaulNSchofield over 1 year ago - 1 comment

#191 - NTR Mixed ion and photon irradiation study

Issue - State: closed - Opened by PaulNSchofield over 1 year ago - 1 comment
Labels: implemented: confirmed & ready for release

#190 - NTR Mixed Irradiation study

Issue - State: closed - Opened by PaulNSchofield over 1 year ago - 1 comment
Labels: implemented: confirmed & ready for release

#189 - Change parent of modality

Issue - State: closed - Opened by PaulNSchofield over 1 year ago - 1 comment
Labels: implemented: confirmed & ready for release

#188 - Update mirrored ontologies

Issue - State: open - Opened by DanBerrios over 1 year ago - 2 comments
Labels: paused: awaiting input/blocked by external factor

#187 - Pi meson and muon have missing parentage from CHEBI

Issue - State: open - Opened by DanBerrios over 1 year ago
Labels: accepted: awaiting implementation in ontology

#186 - Tidy up sentence cases in Study types...

Issue - State: closed - Opened by PaulNSchofield over 1 year ago
Labels: implemented: confirmed & ready for release

#185 - Investigate definition for "microbeam" vs. "particle accelerators"

Issue - State: closed - Opened by DanBerrios over 1 year ago - 2 comments

#184 - Add parent "device" to "microbeam"

Issue - State: open - Opened by DanBerrios over 1 year ago - 1 comment

#183 - NTR radiation (treatment) modality

Issue - State: open - Opened by jmskip over 1 year ago - 7 comments

#182 - Remove pluralised 'studies' types

Issue - State: closed - Opened by reality over 1 year ago - 2 comments

#181 - New changes

Pull Request - State: closed - Opened by reality over 1 year ago - 2 comments

#180 - NTR mixed beam study

Issue - State: closed - Opened by PaulNSchofield over 1 year ago - 7 comments
Labels: new: awaiting discussion in meeting

#179 - NTR Multiple ion radiation and parent considerations

Issue - State: open - Opened by PaulNSchofield over 1 year ago - 5 comments
Labels: new: awaiting discussion in meeting

#178 - NTR Radiation field composition

Issue - State: open - Opened by PaulNSchofield over 1 year ago - 6 comments
Labels: new: awaiting discussion in meeting

#177 - NTR " Beam composition"

Issue - State: open - Opened by PaulNSchofield over 1 year ago - 3 comments
Labels: new: awaiting discussion in meeting

#176 - deprecate electromagnetic radiation quality

Issue - State: open - Opened by PaulNSchofield over 1 year ago - 6 comments
Labels: new: awaiting discussion in meeting

#175 - Consider new textual definition for heavy ion radiation

Issue - State: open - Opened by PaulNSchofield over 1 year ago - 2 comments
Labels: new: awaiting discussion in meeting

#174 - Add additional parent to "heavy ion RBO: 010012

Issue - State: closed - Opened by PaulNSchofield over 1 year ago
Labels: implemented: confirmed & ready for release

#173 - Add charged particle radiation RBO:00000117 as parent of heavy ion radiation

Issue - State: closed - Opened by DanBerrios over 1 year ago - 1 comment
Labels: implemented: confirmed & ready for release

#172 - NTR: radiation beam type

Issue - State: open - Opened by DanBerrios over 1 year ago - 4 comments
Labels: paused: awaiting input from issue requester

#171 - Remove "Field" from "Mixed Radiation Field (RBO:00000015)"

Issue - State: closed - Opened by DanBerrios over 1 year ago - 2 comments

#170 - Approximate sham irradiation

Issue - State: closed - Opened by DanBerrios over 1 year ago
Labels: implemented: confirmed & ready for release

#169 - Rework NORM class definitions

Issue - State: closed - Opened by DanBerrios over 1 year ago - 2 comments
Labels: implemented: confirmed & ready for release

#168 - Import all alkaline earth atoms

Issue - State: closed - Opened by PaulNSchofield over 1 year ago - 2 comments
Labels: implemented: awaiting confirmation

#167 - Dan to bring discussion of the newly added class Control Specimen Role to OBI Dev

Issue - State: open - Opened by DanBerrios over 1 year ago

#166 - changes from issues

Pull Request - State: closed - Opened by reality over 1 year ago

#165 - Internal radiation exposure

Issue - State: closed - Opened by PaulNSchofield over 1 year ago - 2 comments
Labels: implemented: confirmed & ready for release

#164 - NTR: external radiation exposure

Issue - State: closed - Opened by PaulNSchofield over 1 year ago - 1 comment
Labels: implemented: confirmed & ready for release

#163 - NTR: Internal experimental radiation exposure

Issue - State: open - Opened by PaulNSchofield over 1 year ago - 2 comments
Labels: new: awaiting discussion in meeting

#162 - Radon

Issue - State: closed - Opened by PaulNSchofield over 1 year ago - 2 comments
Labels: implemented: confirmed & ready for release

#161 - Missing many elements and isotopes

Issue - State: closed - Opened by PaulNSchofield over 1 year ago - 8 comments

#160 - Deprecate RBO:00000084

Issue - State: closed - Opened by PaulNSchofield over 1 year ago - 5 comments

#159 - "sham irradiated" definition should be clarified

Issue - State: closed - Opened by jmskip over 1 year ago - 4 comments

#158 - Add 'multiple ion radiation' and 'radiation beam type'

Issue - State: open - Opened by kristenpeach over 1 year ago - 1 comment
Labels: new: awaiting discussion in meeting

#157 - 'Radioactive decay' parent change

Issue - State: open - Opened by PaulNSchofield almost 2 years ago - 9 comments
Labels: new: awaiting discussion in meeting

#156 - New class Energy deposition event

Issue - State: open - Opened by PaulNSchofield almost 2 years ago - 5 comments

#155 - charged particle radiation

Issue - State: closed - Opened by PaulNSchofield almost 2 years ago - 2 comments

#154 - Neutral particle radiation

Issue - State: closed - Opened by PaulNSchofield almost 2 years ago - 1 comment
Labels: implemented: confirmed & ready for release

#153 - Highly charged energetic nucleus

Issue - State: closed - Opened by PaulNSchofield almost 2 years ago - 4 comments

#152 - Add parent to heavy ion that is charged particle 00005003

Issue - State: closed - Opened by PaulNSchofield almost 2 years ago - 3 comments
Labels: new: awaiting discussion in meeting

#151 - Move Unplanned irradiation RBO:00002119

Issue - State: closed - Opened by PaulNSchofield almost 2 years ago - 1 comment
Labels: implemented: confirmed & ready for release

#150 - Deprecate Irradiation classes

Issue - State: closed - Opened by PaulNSchofield almost 2 years ago - 2 comments
Labels: implemented: confirmed & ready for release

#149 - Subatomic process

Issue - State: closed - Opened by PaulNSchofield almost 2 years ago - 1 comment
Labels: implemented: confirmed & ready for release

#148 - Merge 2 "NORM" classes

Issue - State: closed - Opened by DanBerrios almost 2 years ago - 2 comments
Labels: implemented: awaiting confirmation, implemented: confirmed & ready for release

#147 - definitions of ionizing radiation and iionizing electromagnetic radiation

Issue - State: closed - Opened by PaulNSchofield almost 2 years ago - 1 comment

#146 - create children of spacecraft and add instance of Biosentinel

Issue - State: open - Opened by kristenpeach almost 2 years ago - 2 comments
Labels: paused: awaiting input from issue requester

#145 - Add annotations for new OBI:radiation class

Issue - State: closed - Opened by DanBerrios almost 2 years ago - 3 comments

#144 - Consider equivalency of OBI:Irradiation and ENVO:Radiation concepts.

Issue - State: closed - Opened by DanBerrios almost 2 years ago - 2 comments

#143 - Fast neutron

Issue - State: closed - Opened by PaulNSchofield almost 2 years ago - 3 comments
Labels: implemented: awaiting confirmation, implemented: confirmed & ready for release

#142 - Charged particle radiation

Issue - State: closed - Opened by PaulNSchofield almost 2 years ago - 2 comments

#141 - add radiation thing, move electromagnetic radiation

Pull Request - State: closed - Opened by DanBerrios almost 2 years ago

#140 - Add new class "nanodosimetry assay"

Issue - State: closed - Opened by PaulNSchofield almost 2 years ago - 1 comment

#139 - Add new class "nanodosimetric measurement datum"

Issue - State: closed - Opened by PaulNSchofield almost 2 years ago
Labels: implemented: confirmed & ready for release

#138 - Add material entities that correspond to radiative events/processes

Issue - State: closed - Opened by DanBerrios about 2 years ago - 5 comments

#137 - add new class deposition event

Issue - State: closed - Opened by PaulNSchofield about 2 years ago - 3 comments

#136 - add new class specific energy

Issue - State: closed - Opened by PaulNSchofield about 2 years ago - 1 comment
Labels: implemented: awaiting confirmation, implemented: confirmed & ready for release

#135 - consider relocation and definition of linear energy transfer RBO_010013

Issue - State: open - Opened by PaulNSchofield about 2 years ago - 1 comment
Labels: paused: awaiting input from issue requester

#134 - add new class lineal energy

Issue - State: open - Opened by PaulNSchofield about 2 years ago - 2 comments
Labels: new: awaiting discussion in meeting

#133 - add new class ionization cluster size

Issue - State: open - Opened by PaulNSchofield about 2 years ago - 1 comment
Labels: new: awaiting discussion in meeting

#132 - add new class ionization cluster

Issue - State: closed - Opened by PaulNSchofield about 2 years ago - 1 comment
Labels: implemented: confirmed & ready for release

#131 - add new class nanodosimetry

Issue - State: closed - Opened by PaulNSchofield about 2 years ago - 4 comments
Labels: implemented: awaiting confirmation, implemented: confirmed & ready for release

#130 - add new class micrometric volume

Issue - State: closed - Opened by PaulNSchofield about 2 years ago - 1 comment
Labels: implemented: awaiting confirmation, implemented: confirmed & ready for release

#129 - add new class particle track penumbra

Issue - State: open - Opened by PaulNSchofield about 2 years ago - 2 comments
Labels: paused: awaiting input from issue requester, new: awaiting discussion in meeting

#128 - add class particle track core

Issue - State: open - Opened by PaulNSchofield about 2 years ago - 2 comments
Labels: paused: awaiting input from issue requester, new: awaiting discussion in meeting

#127 - add new class particle track structure

Issue - State: closed - Opened by PaulNSchofield about 2 years ago - 13 comments
Labels: implemented: awaiting confirmation

#126 - add new class particle track

Issue - State: closed - Opened by PaulNSchofield about 2 years ago - 5 comments
Labels: accepted: awaiting implementation in ontology

#125 - add new class nanodosimetry

Issue - State: closed - Opened by PaulNSchofield about 2 years ago - 2 comments

#124 - add class microdosimetric measurement

Issue - State: closed - Opened by PaulNSchofield about 2 years ago - 2 comments
Labels: implemented: confirmed & ready for release

#123 - Add class microdosimetry

Issue - State: open - Opened by PaulNSchofield about 2 years ago - 11 comments
Labels: paused: awaiting input from issue requester, implemented: confirmed & ready for release

#122 - RBO is inconsistent

Issue - State: closed - Opened by dillerm over 2 years ago - 3 comments
Labels: implemented: awaiting confirmation, implemented: confirmed & ready for release

#121 - Consider adding 'ISS Environmental Simulator' as individual

Issue - State: open - Opened by kristenpeach over 2 years ago - 3 comments
Labels: new: awaiting discussion in meeting

#120 - Disambiguate our measurement datum from quality concepts (eventually)

Issue - State: open - Opened by kristenpeach over 2 years ago
Labels: new: awaiting discussion in meeting

#119 - Consider importing EFO 'light regimen' or making a less specific class

Issue - State: open - Opened by kristenpeach over 2 years ago
Labels: new: awaiting discussion in meeting

#118 - Add 'low dose radiation study' as study type

Issue - State: open - Opened by kristenpeach over 2 years ago - 2 comments
Labels: paused: awaiting input from issue requester

#117 - Add alpha and beta radiation as children of particle radiation

Issue - State: closed - Opened by kristenpeach over 2 years ago - 2 comments
Labels: implemented: awaiting confirmation, implemented: confirmed & ready for release

#116 - Add parent "ionizing radiation" to "charged particle radiation"

Issue - State: closed - Opened by DanBerrios over 2 years ago - 1 comment
Labels: implemented: confirmed & ready for release

#115 - Deprecate RBO radiation quality class because PATO has adopted our definition

Issue - State: closed - Opened by kristenpeach over 2 years ago - 1 comment

#114 - Newchange

Pull Request - State: closed - Opened by reality over 2 years ago

#113 - Add clarification on RBO:Irradiation

Issue - State: open - Opened by DanBerrios over 2 years ago - 1 comment
Labels: new: awaiting discussion in meeting

#112 - Add class "control" and child "non-irradiated control"

Issue - State: closed - Opened by kristenpeach over 2 years ago - 11 comments
Labels: implemented: awaiting confirmation, implemented: confirmed & ready for release

#111 - Corrections and NTRs

Pull Request - State: closed - Opened by DanBerrios over 2 years ago

#110 - Add 'milligray per second' as child of radiation unit

Issue - State: closed - Opened by kristenpeach over 2 years ago - 5 comments

#109 - Irradiation protocol has incorrect parent

Issue - State: closed - Opened by DanBerrios over 2 years ago - 1 comment

#108 - Is "commercial aircraft" supposed to have an ID?

Issue - State: open - Opened by kristenpeach over 2 years ago - 9 comments
Labels: new: awaiting discussion in meeting

#107 - NTR 'microeinstein per square meter per second' synonym UO:0000160

Issue - State: closed - Opened by DanBerrios over 2 years ago - 3 comments

#106 - Add individuals

Pull Request - State: closed - Opened by DanBerrios over 2 years ago

GitHub / Radiobiology-Informatics-Consortium/RBO issues and pull requests