Proteomicslab57357/UniprotR issues and pull requests

#41 - Retrieving incorrect SeqLength for some proteins

Issue - State: open - Opened by RyanWKW about 1 month ago

#40 - Error when loading package

Issue - State: open - Opened by donumanimae 3 months ago - 1 comment

#39 - Errror when fetching ids

Issue - State: open - Opened by ramirobarrantes 3 months ago - 2 comments
Labels: bug

#38 - Enhance the visualization and convertID function now can convert to UniprotKB

Pull Request - State: open - Opened by MohmedSoudy 7 months ago

#37 - Timeout Problem

Issue - State: closed - Opened by Somu796 7 months ago - 1 comment

#36 - Error installing UniprotR in R 4.3.1

Issue - State: closed - Opened by Tomas-Pe about 1 year ago - 2 comments

#35 - New version of UniprotR 2.3.0

Pull Request - State: closed - Opened by MohmedSoudy about 1 year ago

#34 - there is no package called ‘Biostrings’

Issue - State: closed - Opened by biochembryony about 1 year ago - 2 comments

#33 - Update README.md

Pull Request - State: open - Opened by AliYoussef96 about 1 year ago

#32 - Error "Internet connection problem occurs and the function will return original error"

Issue - State: closed - Opened by acragin over 1 year ago - 9 comments

#31 - There is no package called ‘GenomicAlignments and error "name'Internet connection problem occurs and the function will return the original error"

Issue - State: closed - Opened by amechakra almost 2 years ago - 2 comments

#30 - Update README.md

Pull Request - State: open - Opened by AliYoussef96 about 2 years ago

#29 - GetProteinAnnontate produces "cannot open the connection" error due to bad/illegal format

Issue - State: closed - Opened by muecker about 2 years ago - 4 comments
Labels: bug, help wanted

#28 - GetAccessionList is writing an html file rather than a fasta file

Issue - State: closed - Opened by grimmem1 about 2 years ago - 2 comments
Labels: bug

#27 - Update PlotEnrichedPathways.R

Pull Request - State: closed - Opened by samvgon about 2 years ago

#26 - Update PlotEnrichedGO.R

Pull Request - State: closed - Opened by samvgon about 2 years ago

#25 - GetproteinNetwork and GetproteinNetwork_all returning errors

Issue - State: closed - Opened by samvgon about 2 years ago - 1 comment

#24 - GetProteinFunction returns 400 Bad Request

Issue - State: closed - Opened by maringos about 2 years ago - 1 comment

#23 - Uniprot FASTA database download failed

Issue - State: closed - Opened by wardiam about 2 years ago - 12 comments
Labels: bug, help wanted

#22 - ConvertID gives error "Internet connection problem occurs and the function will return the original error"

Issue - State: closed - Opened by tangwei1129 about 2 years ago - 1 comment
Labels: bug

#21 - Error installing version 2.2.0

Issue - State: closed - Opened by rjdirven over 2 years ago - 2 comments
Labels: help wanted

#20 - HTTP status was '400 Bad Request'

Issue - State: closed - Opened by JorgeVindelAlfageme over 2 years ago - 6 comments
Labels: bug

#19 - Organsim name for Pathway.Enr

Issue - State: closed - Opened by davidlilek over 2 years ago - 4 comments
Labels: help wanted

#18 - What background proteins does Enrichment.BP() used?

Issue - State: closed - Opened by WJH58 over 2 years ago - 1 comment
Labels: help wanted

#17 - Timeout when connecting to uniprot.org

Issue - State: closed - Opened by sarahgraff almost 3 years ago - 4 comments
Labels: help wanted

#16 - No package called ‘UniprotR’ after installation

Issue - State: closed - Opened by Xyderal over 3 years ago - 2 comments

#15 - GetProteinFunction() does not work.

Issue - State: closed - Opened by MattiasErhardsson over 3 years ago - 3 comments

#14 - Hidden bioconductor dependency(-ies?) is an obstacle for installation/loading

Issue - State: closed - Opened by MattiasErhardsson over 3 years ago - 1 comment
Labels: bug

#13 - Cannot open connection to

Issue - State: closed - Opened by ReubenMcG over 3 years ago - 7 comments
Labels: help wanted

#12 - Which isoform does GetSequences retrieve?

Issue - State: closed - Opened by vragh over 3 years ago - 6 comments
Labels: help wanted

#11 - Handshake error

Issue - State: closed - Opened by TobiasRubel over 3 years ago - 1 comment

#10 - Installation/dependency issues

Issue - State: closed - Opened by joegeorgeson almost 4 years ago - 1 comment
Labels: bug

#9 - export PlotGoInfo

Issue - State: closed - Opened by cculma about 4 years ago - 1 comment
Labels: help wanted

#8 - Cannot convert UniProtKB AC/ID to UniProtKB

Issue - State: closed - Opened by goncik about 4 years ago - 1 comment
Labels: help wanted

#7 - Small typo

Pull Request - State: closed - Opened by rahul799 over 4 years ago

#6 - Cannot download Uniprot FASTA file

Issue - State: closed - Opened by richelbilderbeek over 4 years ago - 5 comments
Labels: bug

#5 - Fix typo: changed to 'containing' from 'containig'

Pull Request - State: closed - Opened by richelbilderbeek over 4 years ago

#4 - GetProteinAnnontate function cannot parse the content of Column-Function

Issue - State: closed - Opened by panxiaoguang over 4 years ago - 2 comments
Labels: help wanted

#2 - Ali

Pull Request - State: closed - Opened by AliYoussef96 almost 5 years ago

#1 - Ali

Pull Request - State: closed - Opened by AliYoussef96 almost 5 years ago

GitHub / Proteomicslab57357/UniprotR issues and pull requests