Project-MONAI/tutorials issues and pull requests

#1835 - Update label dict

Pull Request - State: open - Opened by heyufan1995 1 day ago - 1 comment

#1833 - Evaluation metric

Issue - State: open - Opened by RY-97 3 days ago

#1831 - Make notebooks under bundle folder runable

Pull Request - State: closed - Opened by KumoLiu 4 days ago - 1 comment

#1830 - How can I change 3d-IDM and Controlnet models to run on a system with 16 g ram and 4g GPU?

Issue - State: closed - Opened by NeDa-Y 4 days ago - 1 comment

#1828 - Fix broken links in unetr_btcv_segmentation_3d.ipynb

Pull Request - State: closed - Opened by KumoLiu 6 days ago - 1 comment

#1827 - Broken links in unetr_btcv_segmentation_3d.ipynb

Issue - State: closed - Opened by KumoLiu 6 days ago

#1826 - Fix typo in luna16 detection tutorial

Pull Request - State: closed - Opened by KumoLiu 6 days ago

#1825 - Update maisi readme and add input check to controlnet infer script

Pull Request - State: closed - Opened by guopengf 10 days ago

#1824 - Remove deprecated `pos_embed`

Pull Request - State: closed - Opened by KumoLiu 12 days ago - 1 comment

#1823 - Porting of 2d_autoencoderkl and 3d_autoencoderkl tutorials from MONAI generative

Pull Request - State: closed - Opened by virginiafdez 12 days ago - 1 comment

#1822 - Update google link to use shared drive

Pull Request - State: closed - Opened by KumoLiu 13 days ago - 1 comment

#1821 - Remove installation section in ldm2d and ldm3d readme

Pull Request - State: closed - Opened by KumoLiu 13 days ago - 1 comment

#1820 - urlopen error retrieval incomplete in modules/autoencoder_mednist.ipynb

Issue - State: open - Opened by KumoLiu 14 days ago
Labels: bug

#1819 - Update google link to use shared drive

Pull Request - State: closed - Opened by KumoLiu 15 days ago - 1 comment

#1818 - Ported all anomaly_detection tutorials

Pull Request - State: closed - Opened by pedrob37 16 days ago - 2 comments

#1817 - Adding VQVAE/VQGAN Tutorials

Pull Request - State: closed - Opened by ericspod 16 days ago - 1 comment

#1815 - Porting of 2D ControlNet tutorial using DDPM and ControlNet to guide image synthesis

Pull Request - State: closed - Opened by virginiafdez 17 days ago - 4 comments

#1814 - DDPM Tutorials

Pull Request - State: closed - Opened by ericspod 18 days ago - 6 comments

#1813 - Fix typo

Pull Request - State: closed - Opened by KumoLiu 18 days ago - 1 comment

#1812 - Vista 2D | Edits etc.

Pull Request - State: closed - Opened by finalelement 18 days ago - 1 comment

#1811 - Fix KeyError in ./pathology/tumor_detection/ignite/profiling_camelyon_pipeline.ipynb

Pull Request - State: closed - Opened by KumoLiu 19 days ago - 1 comment

#1810 - KeyError in ./pathology/tumor_detection/ignite/profiling_camelyon_pipeline.ipynb

Issue - State: closed - Opened by KumoLiu 19 days ago
Labels: bug

#1809 - refactor learn2reg_nlst_paired_lung_ct

Pull Request - State: closed - Opened by KumoLiu 19 days ago - 6 comments

#1808 - Jupytext

Pull Request - State: closed - Opened by KumoLiu 20 days ago - 1 comment

#1807 - TypeError: create.<locals>.Validator.init() got an unexpected keyword argument 'registry'

Issue - State: open - Opened by KumoLiu 20 days ago - 1 comment
Labels: bug

#1806 - [MAISI] Update check_input() and Diffusion Model Training

Pull Request - State: closed - Opened by dongyang0122 22 days ago - 4 comments

#1805 - `runner.sh` Parses Some Files Incorrectly

Issue - State: open - Opened by ericspod 24 days ago - 2 comments

#1804 - Add mirror for ixi dataset

Pull Request - State: closed - Opened by KumoLiu 25 days ago - 1 comment

#1803 - 1802-Add the monai label tutorial for cellprofiler

Pull Request - State: closed - Opened by binliunls 25 days ago - 2 comments

#1802 - Add tutorial for VISTA2D+CellProfiler

Issue - State: closed - Opened by binliunls 26 days ago

#1801 - Invaild data link for IXI Dataset

Issue - State: closed - Opened by KumoLiu 27 days ago - 5 comments
Labels: bug

#1799 - ADd vista3d tutorial

Pull Request - State: closed - Opened by heyufan1995 29 days ago - 14 comments

#1798 - Update MAISI README

Pull Request - State: closed - Opened by dongyang0122 29 days ago

#1796 - Tutorial gradCAM 3D seems to have inverted heatmap

Issue - State: closed - Opened by CamilleDelgrange about 1 month ago - 1 comment

#1795 - Update luna detection

Pull Request - State: closed - Opened by KumoLiu about 1 month ago - 3 comments

#1794 - Addition of SPADE LDM and SPADE Network tutorials to the generation

Pull Request - State: closed - Opened by virginiafdez about 1 month ago - 3 comments

#1793 - Question about MAISI data preprocessing

Issue - State: open - Opened by johnson111788 about 1 month ago - 5 comments
Labels: enhancement

#1792 - update maisi ckpt link, update load functions

Pull Request - State: closed - Opened by Can-Zhao about 1 month ago - 1 comment

#1789 - MAISI Quality check

Pull Request - State: closed - Opened by Can-Zhao about 1 month ago - 2 comments

#1788 - Vista-2D Tutorial

Pull Request - State: closed - Opened by finalelement about 1 month ago - 4 comments

#1787 - AverageMeter and Metric Reduction Clarification

Issue - State: open - Opened by 25benjaminli about 1 month ago - 1 comment

#1786 - Remove repeated definition in MAISI

Pull Request - State: closed - Opened by Can-Zhao about 1 month ago

#1785 - LDM Script Fix

Pull Request - State: closed - Opened by ericspod about 1 month ago

#1784 - ModuleNotFoundError: No module named 'monai.transforms.morphological_ops'

Issue - State: closed - Opened by KumoLiu about 1 month ago - 1 comment

#1783 - distributed_training

Issue - State: open - Opened by yiheng-wang-nv about 1 month ago - 1 comment

#1782 - Update MAISI README with Quality Evaluation Results

Pull Request - State: closed - Opened by dongyang0122 about 1 month ago

#1781 - 1780-add-img-translation-tutorial

Pull Request - State: closed - Opened by yiheng-wang-nv about 1 month ago - 1 comment

#1780 - image_to_image_translation

Issue - State: closed - Opened by yiheng-wang-nv about 1 month ago

#1779 - Refactor MAISI tutorial, migrate GenerativeAI import

Pull Request - State: closed - Opened by Can-Zhao about 1 month ago - 5 comments

#1778 - Update morphological ops path

Pull Request - State: closed - Opened by yiheng-wang-nv about 1 month ago

#1777 - Auto3dseg swinunetr Pretrained weight download link not working

Issue - State: open - Opened by akadumberi about 1 month ago

#1776 - change maisi notebook display function

Issue - State: open - Opened by Can-Zhao about 1 month ago
Labels: enhancement

#1775 - Port LDM Tutorials

Pull Request - State: closed - Opened by ericspod about 1 month ago - 7 comments

#1773 - Using auto3dseg for Multichannel Inputs

Issue - State: open - Opened by Yasna-frn about 2 months ago - 2 comments

#1772 - Refactor MAISI Network with New Generative AI Components

Issue - State: closed - Opened by KumoLiu about 2 months ago - 1 comment

#1771 - Add generative model metrics notebook

Pull Request - State: closed - Opened by yiheng-wang-nv about 2 months ago - 11 comments

#1770 - realism_diversity_metrics

Issue - State: closed - Opened by yiheng-wang-nv about 2 months ago

#1769 - Port Existing Generative Tutorials

Issue - State: open - Opened by ericspod about 2 months ago - 10 comments

#1768 - update generative func to monai core func

Pull Request - State: closed - Opened by Can-Zhao about 2 months ago - 1 comment

#1767 - change folder name generative to generation

Pull Request - State: closed - Opened by Can-Zhao about 2 months ago - 9 comments

#1764 - Index embedding of MAISI

Issue - State: closed - Opened by Z7Gao about 2 months ago - 2 comments

#1763 - Add controlnet training notebook

Pull Request - State: closed - Opened by guopengf 2 months ago - 9 comments

#1762 - update maisi contorlnet train config file

Pull Request - State: closed - Opened by guopengf 2 months ago

#1761 - Update Descriptions in Diffusion Model Training Notebook

Pull Request - State: closed - Opened by dongyang0122 2 months ago - 1 comment

#1760 - Issue in maisi_train_vae_tutorial

Issue - State: closed - Opened by KumoLiu 2 months ago - 2 comments

#1759 - can't run on large datasets

Issue - State: open - Opened by Smarter1214 2 months ago - 2 comments

#1758 - Refactor to use shared plot functions

Pull Request - State: closed - Opened by guopengf 2 months ago - 1 comment

#1757 - Maisi VAE notebook

Pull Request - State: closed - Opened by Can-Zhao 2 months ago - 8 comments

#1756 - Maisi debug

Issue - State: closed - Opened by carlpe 2 months ago - 1 comment

#1755 - MAISI VAE transforms

Pull Request - State: closed - Opened by Can-Zhao 2 months ago - 1 comment

#1754 - Maisi remove inference notebook

Pull Request - State: closed - Opened by Can-Zhao 2 months ago - 1 comment

#1752 - Pass args to Interaction classes

Pull Request - State: closed - Opened by diazandr3s 3 months ago - 1 comment

#1751 - Split PR and add Maisi find mask script

Pull Request - State: closed - Opened by Can-Zhao 3 months ago

#1750 - Add maisi controlnet training

Pull Request - State: closed - Opened by guopengf 3 months ago - 4 comments

#1749 - Split PR for MAISI augmentation

Pull Request - State: closed - Opened by Can-Zhao 3 months ago - 2 comments

#1748 - Add maisi mask aug example

Pull Request - State: closed - Opened by guopengf 3 months ago - 9 comments

#1745 - Add tutorial to demonstrate how to train a generative model that can generate large image volumes

Pull Request - State: closed - Opened by dongyang0122 3 months ago - 8 comments

#1744 - Adding tutorial to demonstrate how to train a generative model that can generate large image volumes

Issue - State: closed - Opened by dongyang0122 3 months ago

#1743 - Maisi readme

Pull Request - State: closed - Opened by Can-Zhao 3 months ago - 5 comments

#1742 - Auto3DSeg evaluation using dice coefficient

Issue - State: open - Opened by Shathaabudalou 3 months ago - 1 comment

#1741 - MAISI inference utility functions used for notebook

Pull Request - State: closed - Opened by Can-Zhao 3 months ago - 8 comments

#1740 - Adding a FEDn example to the MONAI tutorial repository.

Pull Request - State: closed - Opened by sztoor 3 months ago - 4 comments

#1724 - Auto3DSeg to test data for segmentation of the Lung

Issue - State: closed - Opened by BhosaleSumedha 4 months ago - 12 comments

#1723 - Fix IndexError in modules/resample_benchmark.ipynb

Pull Request - State: closed - Opened by KumoLiu 4 months ago - 1 comment

#1698 - nbclient.exceptions.DeadKernelError: Kernel died in ./modules/3d_image_transforms.ipynb

Issue - State: closed - Opened by KumoLiu 5 months ago - 7 comments

#1631 - The tutorial accompanying the pull request #7308 for MONAI core, which adds SURE-loss and Conjugate Gradient

Pull Request - State: open - Opened by cxlcl 8 months ago - 21 comments

#1554 - Auto3DSeg in Azure fails - new to Auto3DSeg

Issue - State: open - Opened by rfrs 11 months ago - 25 comments