Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / PittGenomics/SwiftSeq issues and pull requests

#24 - Switch camelCase to snake_case in Workflow constructor

Pull Request - State: closed - Opened by annawoodard over 6 years ago - 1 comment

#22 - Added bioconda tage for bowtie2

Pull Request - State: closed - Opened by djf604 almost 7 years ago

#21 - Added wrapper for filtering VCFs on a bed file

Pull Request - State: closed - Opened by djf604 almost 7 years ago

#20 - Added Sphinx documentation for import into Read The Docs

Pull Request - State: closed - Opened by djf604 almost 7 years ago

#19 - Conda install

Pull Request - State: closed - Opened by djf604 almost 7 years ago

#18 - --local flag for local runs

Issue - State: open - Opened by JasonJPitt about 7 years ago
Labels: enhancement

#17 - Moved from perl script to picard SortVcf

Pull Request - State: closed - Opened by djf604 about 7 years ago

#16 - Add bed file support

Issue - State: open - Opened by JasonJPitt about 7 years ago
Labels: enhancement

#15 - Moved from perl script to picard SortVcf

Pull Request - State: closed - Opened by JasonJPitt about 7 years ago

#14 - Graphic sh

Pull Request - State: closed - Opened by djf604 about 7 years ago

#13 - User can specify pre-made Swift config

Pull Request - State: closed - Opened by djf604 about 7 years ago

#12 - Allow user supplied configuration file

Issue - State: closed - Opened by JasonJPitt about 7 years ago

#11 - Replace our EOF check with Samtools quickcheck

Issue - State: open - Opened by JasonJPitt about 7 years ago
Labels: enhancement

#10 - V1.0.1

Pull Request - State: closed - Opened by djf604 about 7 years ago

#9 - Purge unused apps and software

Issue - State: open - Opened by JasonJPitt about 7 years ago
Labels: enhancement

#8 - V1.0.1

Pull Request - State: closed - Opened by JasonJPitt about 7 years ago - 1 comment

#7 - Implement new vcf sorting method

Issue - State: closed - Opened by JasonJPitt about 7 years ago - 1 comment

#6 - Multiple scheduler support - Swift.conf

Issue - State: open - Opened by JasonJPitt about 7 years ago

#5 - graphic.sh is not executable

Issue - State: closed - Opened by JasonJPitt about 7 years ago - 1 comment

#4 - Need sambamba merge | sambamba sort

Issue - State: closed - Opened by JasonJPitt over 7 years ago - 2 comments

#3 - App walltime in json being ignored

Issue - State: closed - Opened by JasonJPitt over 7 years ago - 1 comment

#2 - Consolidate final output and logs

Issue - State: open - Opened by djf604 over 7 years ago
Labels: enhancement

#1 - Extra features

Pull Request - State: closed - Opened by djf604 over 7 years ago