Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / PacificBiosciences/paraphase issues and pull requests

#31 - Version 3.1.2

Pull Request - State: closed - Opened by xiao-chen-xc 8 days ago

#30 - Version 3.2

Pull Request - State: open - Opened by xiao-chen-xc 23 days ago

#29 - HBA phasing problems

Issue - State: open - Opened by mnfrandre 23 days ago - 5 comments

#28 - Run paraphase on CHM13 reference

Issue - State: closed - Opened by EddieLee08 2 months ago - 2 comments

#27 - Paraphase output annotation

Issue - State: open - Opened by themkdemiiir 2 months ago - 2 comments

#26 - Most pseudogenes have no read alignment from Paraphase output

Issue - State: closed - Opened by minw2828 3 months ago - 7 comments

#25 - Question about multi-threading

Issue - State: closed - Opened by gabeng 7 months ago - 3 comments

#24 - Future plans for paraphase?

Issue - State: closed - Opened by ehre 8 months ago - 3 comments

#23 - distinguishing reads for each paralog

Issue - State: closed - Opened by indapa 9 months ago - 2 comments

#22 - test files

Issue - State: closed - Opened by MagdalenaZZ 9 months ago - 2 comments

#21 - add support for cram files

Issue - State: open - Opened by flokraft85 9 months ago - 2 comments

#20 - Version 3.1.1

Pull Request - State: closed - Opened by xiao-chen-xc 10 months ago

#19 - Version 3.1

Pull Request - State: closed - Opened by xiao-chen-xc 10 months ago

#18 - Understanding the exact workings of paraphase

Issue - State: closed - Opened by youpze 10 months ago - 2 comments

#17 - Paraphase determines output prefix from input filename

Issue - State: closed - Opened by williamrowell 12 months ago - 1 comment

#16 - paraphase output VCFs cannot be parsed by htslib tools

Issue - State: closed - Opened by gabeng 12 months ago - 5 comments

#15 - Dealing with uneven coverage

Issue - State: open - Opened by keremozdel almost 1 year ago - 3 comments

#14 - How to determine some parameters in YAML files

Issue - State: closed - Opened by evayfang2019 about 1 year ago - 1 comment

#13 - Exception: Two haplotypes are not equal length

Issue - State: open - Opened by liukeweiaway about 1 year ago - 2 comments

#12 - Error about bam

Issue - State: closed - Opened by crazysummerW about 1 year ago - 6 comments

#11 - Understanding CNV Distribution and Counts Across Haplotypes

Issue - State: closed - Opened by sloth-eat-pudding about 1 year ago - 5 comments

#9 - Version3

Pull Request - State: closed - Opened by xiao-chen-xc over 1 year ago

#8 - Error index f8

Issue - State: closed - Opened by bioinfogit over 1 year ago - 4 comments

#7 - Version 2.2.3

Pull Request - State: closed - Opened by xiao-chen-xc over 1 year ago

#6 - v2.2.2

Pull Request - State: closed - Opened by xiao-chen-xc almost 2 years ago

#5 - V2.2

Pull Request - State: closed - Opened by xiao-chen-xc almost 2 years ago

#4 - Phasing and variant calling improvements

Pull Request - State: closed - Opened by xiao-chen-xc almost 2 years ago

#3 - Update Paraphase to include new genes

Pull Request - State: closed - Opened by xiao-chen-xc almost 2 years ago

#2 - Remove the need for DeepVariant

Pull Request - State: closed - Opened by xiao-chen-xc about 2 years ago

#1 - Update and rename LICENSE.txt to LICENSE

Pull Request - State: closed - Opened by armintoepfer over 2 years ago