PaccMann/paccmann_predictor issues and pull requests

#31 - fix: add long_description_content_type

Pull Request - State: closed - Opened by fiskrt 6 months ago

#31 - fix: add long_description_content_type

Pull Request - State: closed - Opened by fiskrt 6 months ago

#30 - ci: add test for pypi exposed code

Pull Request - State: closed - Opened by fiskrt 6 months ago

#30 - ci: add test for pypi exposed code

Pull Request - State: closed - Opened by fiskrt 6 months ago

#29 - chore: add imports to setup.py

Pull Request - State: closed - Opened by fiskrt 6 months ago

#29 - chore: add imports to setup.py

Pull Request - State: closed - Opened by fiskrt 6 months ago

#28 - Error in IC50 prediction due to dimension inconsistency

Issue - State: closed - Opened by ghost 10 months ago - 2 comments

#28 - Error in IC50 prediction due to dimension inconsistency

Issue - State: closed - Opened by ghost 10 months ago - 2 comments

#27 - Error when testing on the example dataset

Issue - State: closed - Opened by Qianhui-Zheng over 1 year ago - 1 comment

#27 - Error when testing on the example dataset

Issue - State: closed - Opened by Qianhui-Zheng over 1 year ago - 1 comment

#26 - A interesting bug for paccmann_predictor training.

Issue - State: closed - Opened by DBinary over 1 year ago - 2 comments

#26 - A interesting bug for paccmann_predictor training.

Issue - State: closed - Opened by DBinary over 1 year ago - 2 comments

#25 - How could we use GPU to train paccmann?

Issue - State: closed - Opened by DBinary over 1 year ago - 5 comments

#25 - How could we use GPU to train paccmann?

Issue - State: closed - Opened by DBinary over 1 year ago - 5 comments

#24 - Can't Generate the SMILES_Language_Object.

Issue - State: closed - Opened by DBinary over 1 year ago - 2 comments

#24 - Can't Generate the SMILES_Language_Object.

Issue - State: closed - Opened by DBinary over 1 year ago - 2 comments

#23 - Access to pre-trained BindingDB affinity model and required input files

Issue - State: closed - Opened by ashlin-k over 1 year ago - 6 comments

#23 - Access to pre-trained BindingDB affinity model and required input files

Issue - State: closed - Opened by ashlin-k over 1 year ago - 6 comments

#22 - Access to trained affinity model and associated files

Issue - State: closed - Opened by ashlin-k over 1 year ago - 2 comments

#22 - Access to trained affinity model and associated files

Issue - State: closed - Opened by ashlin-k over 1 year ago - 2 comments

#21 - Not all 2128 predictive genes expressed among the cell lines for testing?

Issue - State: closed - Opened by MikeKlocCZ about 2 years ago - 1 comment

#21 - Not all 2128 predictive genes expressed among the cell lines for testing?

Issue - State: closed - Opened by MikeKlocCZ about 2 years ago - 1 comment

#20 - Predictions on tcga sample data

Issue - State: closed - Opened by MikeKlocCZ about 2 years ago - 1 comment

#20 - Predictions on tcga sample data

Issue - State: closed - Opened by MikeKlocCZ about 2 years ago - 1 comment

#19 - Merging PaccMannV2 and improved documentation

Pull Request - State: closed - Opened by jannisborn about 2 years ago

#18 - Example

Pull Request - State: closed - Opened by jannisborn about 2 years ago

#17 - Recreating IC50 prediction

Issue - State: closed - Opened by barabadwan almost 3 years ago - 23 comments

#16 - Pretrained paccmann_predictor model is saved with different weight names

Issue - State: closed - Opened by barabadwan almost 3 years ago - 1 comment

#15 - ci: set up GA

Pull Request - State: closed - Opened by jannisborn about 3 years ago

#14 - TypeError: can't convert np.ndarray of type numpy.object_

Issue - State: closed - Opened by FarzanT over 3 years ago - 3 comments

#13 - AttributeError: 'SMILESLanguage' object has no attribute 'transform_encoding'

Issue - State: closed - Opened by FarzanT over 3 years ago - 3 comments

#12 - feat: KNN predictor for DrugResponse

Pull Request - State: closed - Opened by jannisborn over 3 years ago
Labels: enhancement

#11 - Confidence in dose model

Pull Request - State: closed - Opened by jannisborn over 3 years ago
Labels: invalid

#10 - Titan

Pull Request - State: closed - Opened by annaweber209 almost 4 years ago - 2 comments

#9 - Kinases

Pull Request - State: closed - Opened by annaweber209 almost 4 years ago

#8 - Affinity

Pull Request - State: closed - Opened by jannisborn about 4 years ago

#7 - Merge Context Attention Layer

Pull Request - State: closed - Opened by jannisborn about 4 years ago
Labels: enhancement

#6 - How to prepare the gene expression data?

Issue - State: closed - Opened by Pascal-Iv about 4 years ago - 2 comments

#5 - Webserver adaptations

Pull Request - State: closed - Opened by jannisborn almost 5 years ago
Labels: enhancement

#4 - Confidence estimators

Pull Request - State: closed - Opened by jannisborn almost 5 years ago
Labels: enhancement

#3 - updated versioning (bumping pytoda, removing tensorflow dependency)

Pull Request - State: closed - Opened by jannisborn almost 5 years ago

#2 - Fix: Resolve torch/tensorflow ordering import problem

Pull Request - State: closed - Opened by jannisborn about 5 years ago

#1 - tensorflow import fails

Issue - State: closed - Opened by jannisborn about 5 years ago
Labels: bug

GitHub / PaccMann/paccmann_predictor issues and pull requests