Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / PMEAL/porespy issues and pull requests

#838 - Add logger.info to beginning and end of each function

Issue - State: open - Opened by jgostick about 1 year ago - 5 comments
Labels: enhancement, easy

#836 - Adding ascending arg to seq functions

Pull Request - State: closed - Opened by jgostick about 1 year ago - 1 comment

#835 - Memory leak in `diffusive_size_factor_dns`

Issue - State: open - Opened by jgostick about 1 year ago - 2 comments
Labels: performance

#830 - changed radius to r in voronoi_edges

Pull Request - State: closed - Opened by jgostick about 1 year ago - 1 comment

#829 - Including dtype in sum

Pull Request - State: closed - Opened by jgostick about 1 year ago - 1 comment

#827 - subtracting the throat cross-sectional areas from the pore surface ar…

Pull Request - State: closed - Opened by avlmachado about 1 year ago - 5 comments

#824 - Rename `cylinders` to `overlapping_cylinders` to be more consistent

Issue - State: open - Opened by jgostick about 1 year ago
Labels: discussion, api

#821 - Reporting a vulnerability

Issue - State: closed - Opened by igibek about 1 year ago

#814 - Wrong porosity value on large images

Issue - State: closed - Opened by ivonindima over 1 year ago - 1 comment
Labels: bug, easy

#812 - Fix trap region

Pull Request - State: closed - Opened by Ni2M over 1 year ago - 1 comment

#811 - fixing imageio in 2 examples

Pull Request - State: closed - Opened by jgostick over 1 year ago - 2 comments

#810 - Fix table describing result attributes

Pull Request - State: closed - Opened by rickyfann over 1 year ago - 1 comment

#809 - Fix parse pad width

Pull Request - State: closed - Opened by jgostick over 1 year ago - 1 comment

#808 - Fix divs bug in blobs

Pull Request - State: closed - Opened by jgostick over 1 year ago - 1 comment

#807 - Handling dicts better in Results object

Pull Request - State: closed - Opened by jgostick over 1 year ago - 2 comments

#806 - Making Results object more useful

Pull Request - State: closed - Opened by jgostick over 1 year ago - 1 comment

#805 - Add a `packed_spheres` function to unify gravity and electrostatic packings

Issue - State: closed - Opened by jgostick over 1 year ago
Labels: enhancement, feature request

#804 - Add zip to stack and folder to stack

Pull Request - State: closed - Opened by jgostick over 1 year ago - 1 comment

#803 - using __all__ everywhere

Pull Request - State: closed - Opened by jgostick over 1 year ago - 1 comment

#802 - added seed arg throughout, add tests for each

Pull Request - State: closed - Opened by jgostick over 1 year ago - 1 comment

#801 - Stress test spheres from coords

Pull Request - State: closed - Opened by jgostick over 1 year ago - 2 comments

#800 - Adding show_panels function to visualization

Pull Request - State: closed - Opened by jgostick over 1 year ago - 2 comments

#799 - Added spheres from coords generator

Pull Request - State: closed - Opened by jgostick over 1 year ago - 2 comments

#797 - pixel vs. voxel scaling

Issue - State: closed - Opened by Curf over 1 year ago - 1 comment

#796 - Add function to compute diffusive size factor using dns

Pull Request - State: closed - Opened by jgostick over 1 year ago - 5 comments

#794 - Update `set_mpl_style` to set origin and interpolation

Issue - State: closed - Opened by jgostick over 1 year ago - 1 comment
Labels: enhancement

#792 - add seed argument to all generators

Issue - State: closed - Opened by jgostick over 1 year ago

#791 - Add better sierpinski foam

Pull Request - State: closed - Opened by jgostick over 1 year ago - 2 comments

#790 - Fix rsa

Pull Request - State: closed - Opened by jgostick over 1 year ago - 1 comment

#789 - Add generator function for inlets and/or outlets

Issue - State: closed - Opened by jgostick over 1 year ago
Labels: enhancement, easy

#788 - Add function source to Results objects

Issue - State: closed - Opened by jgostick over 1 year ago - 2 comments

#787 - Auto-populate module docs using Sphinx templates instead of autosummary

Issue - State: open - Opened by jgostick over 1 year ago
Labels: maint, doc

#786 - Use "__all__" in files to declare imports

Issue - State: closed - Opened by jgostick over 1 year ago

#783 - Fix link to installation guide

Pull Request - State: closed - Opened by ecederstrand over 1 year ago - 3 comments

#780 - More examples

Pull Request - State: closed - Opened by jgostick over 1 year ago - 2 comments

#779 - math in tortuosity_fd example is broken

Issue - State: closed - Opened by jgostick over 1 year ago
Labels: doc

#778 - boundary_width in snow2 breaks when trying to specify padding on both ends of all axes

Issue - State: closed - Opened by jgostick over 1 year ago - 1 comment
Labels: bug

#777 - Printing of the Results class should ignore dicts

Issue - State: closed - Opened by jgostick over 1 year ago
Labels: enhancement, easy

#775 - Finish the examples in the network module that are listed as [WIP]

Issue - State: closed - Opened by jgostick over 1 year ago
Labels: documentation, easy

#774 - mode='extended' doesn't work when clearance>0 in rsa

Issue - State: closed - Opened by jgostick over 1 year ago
Labels: bug

#764 - Moving percolation functions to simulations module

Pull Request - State: closed - Opened by jgostick over 1 year ago - 2 comments

#763 - Move ibip and ibip_gpu to simulations

Issue - State: closed - Opened by jgostick over 1 year ago

#762 - Fix the bug when dynamically changing loglevel

Pull Request - State: closed - Opened by ma-sadeghi over 1 year ago - 1 comment

#761 - Changing loglevel doesn't work as expected

Issue - State: closed - Opened by ma-sadeghi over 1 year ago

#760 - `_estimate_overlap` should accept dt argument for speed

Issue - State: closed - Opened by mkaguer over 1 year ago - 1 comment

#759 - `tortuosity_fd` should raise Exception if all pores are floating pores

Pull Request - State: closed - Opened by ma-sadeghi over 1 year ago - 1 comment

#757 - `clearance` arg in pseudo packings not working as it should

Issue - State: closed - Opened by jgostick over 1 year ago - 1 comment
Labels: bug

#756 - Don't forget to merge release back into dev!

Pull Request - State: closed - Opened by github-actions[bot] over 1 year ago - 1 comment
Labels: high priority

#755 - Release of v2.2.2

Pull Request - State: closed - Opened by ma-sadeghi over 1 year ago - 1 comment

#754 - Add mode to imagej_wrapper and imagej_plugin

Pull Request - State: closed - Opened by mkaguer over 1 year ago - 1 comment

#753 - Use `rich` for logging instead of `loguru`

Pull Request - State: closed - Opened by ma-sadeghi over 1 year ago - 1 comment

#750 - Enhance `tortuosity_fd` usability and performance

Pull Request - State: closed - Opened by ma-sadeghi over 1 year ago - 1 comment

#747 - New visualization function to just show a series of panels?

Issue - State: closed - Opened by jgostick over 1 year ago - 1 comment

#746 - `tortuosity_fd` might be doing too much

Issue - State: open - Opened by ma-sadeghi over 1 year ago - 1 comment

#745 - `regions_to_network` breaks when there are no throats

Issue - State: open - Opened by ma-sadeghi over 1 year ago - 1 comment
Labels: bug

#744 - Adding general examples

Pull Request - State: closed - Opened by jgostick over 1 year ago - 2 comments

#743 - Don't forget to merge release back into dev!

Pull Request - State: closed - Opened by github-actions[bot] over 1 year ago - 1 comment
Labels: high priority

#742 - Release of v2.2.1

Pull Request - State: closed - Opened by ma-sadeghi over 1 year ago - 2 comments

#739 - Add tutorial on loading and processing external images

Issue - State: closed - Opened by jgostick over 1 year ago - 1 comment
Labels: documentation

#735 - `blobs` breaks when `divs` > 1

Issue - State: closed - Opened by ma-sadeghi almost 2 years ago
Labels: bug

#733 - Turn off command line log in AI size factor notebook

Issue - State: closed - Opened by ma-sadeghi almost 2 years ago - 1 comment

#731 - Fix documentation (pydata-sphinx-theme broke our build) + migrate to myst-nb

Pull Request - State: closed - Opened by ma-sadeghi almost 2 years ago - 1 comment

#730 - Adding example on creating multiscale images

Pull Request - State: closed - Opened by jgostick almost 2 years ago - 2 comments

#729 - Adding aspect ratio to REV

Pull Request - State: open - Opened by jgostick almost 2 years ago

#728 - Adding random_walk with Knudsen effect

Pull Request - State: closed - Opened by jgostick almost 2 years ago - 1 comment

#724 - Don't forget to merge release back into dev!

Pull Request - State: closed - Opened by github-actions[bot] almost 2 years ago - 1 comment
Labels: high priority

#723 - Merge dev on to release for v2.2.0

Pull Request - State: closed - Opened by ma-sadeghi almost 2 years ago - 2 comments

#722 - Merge dev on to release for v2.1.1

Pull Request - State: closed - Opened by ma-sadeghi almost 2 years ago - 1 comment

#721 - Merge dev on to release for V2.1.1

Pull Request - State: closed - Opened by jgostick almost 2 years ago - 2 comments

#720 - maximal_ball_wrapper does not work

Issue - State: closed - Opened by xiangWu-WW almost 2 years ago - 1 comment

#719 - Add Python 3.10 to CI workflows

Pull Request - State: closed - Opened by ma-sadeghi almost 2 years ago

#718 - Latest `scipy` breaks `bundle_of_tubes`

Issue - State: closed - Opened by ma-sadeghi almost 2 years ago

#717 - `ncores` attribute of `Settings` should return number of "physical" cores

Pull Request - State: closed - Opened by ma-sadeghi almost 2 years ago - 1 comment

#716 - Sync `requirements.txt` and `install_requires` in `setup.py`

Pull Request - State: closed - Opened by ma-sadeghi almost 2 years ago - 2 comments

#712 - Update `install_requires` in setup.py

Issue - State: closed - Opened by ma-sadeghi almost 2 years ago - 1 comment

#709 - `tqdm` seems to have changed something in their backend

Issue - State: closed - Opened by jgostick almost 2 years ago - 2 comments
Labels: bug, high priority

#704 - `tqdm` progress bars behave strangely

Issue - State: closed - Opened by ma-sadeghi about 2 years ago - 1 comment
Labels: bug

#702 - Unit test for tpcf

Pull Request - State: closed - Opened by PascalRuzzante about 2 years ago

#701 - Add files via upload

Pull Request - State: closed - Opened by PascalRuzzante about 2 years ago - 4 comments

#698 - Update README and remove the link to Substack

Issue - State: closed - Opened by ma-sadeghi about 2 years ago - 1 comment

#692 - `chords_apply` with `spacing=0` is incompatible with `chords_count`

Issue - State: closed - Opened by bernarda78 about 2 years ago - 2 comments

#690 - `imageio.volwrite` has been deprecated and no longer works with recent tifffile

Issue - State: closed - Opened by ma-sadeghi about 2 years ago - 1 comment
Labels: bug, high priority

#686 - `networks.maximal_ball_wrapper` produces no output

Issue - State: closed - Opened by minzhangut about 2 years ago - 3 comments

#668 - Make reference notebooks for all the funcs in tools

Issue - State: closed - Opened by jgostick over 2 years ago - 2 comments
Labels: help wanted, easy, doc

#666 - Alter 2-point correlation output

Issue - State: closed - Opened by jgostick over 2 years ago - 3 comments

#661 - `porosity_profile` could use a bit more control

Issue - State: open - Opened by jgostick over 2 years ago - 1 comment
Labels: enhancement, easy

#658 - add protrusion argument to rsa

Issue - State: closed - Opened by jgostick over 2 years ago
Labels: enhancement, easy

#655 - mode should be edges in rsa

Issue - State: closed - Opened by jgostick over 2 years ago - 1 comment
Labels: breaking change

#654 - should n_max be changed to maxiter?

Issue - State: closed - Opened by jgostick over 2 years ago - 1 comment
Labels: breaking change

#650 - Remove `return_mask` argument in `find_trapped_regions`

Issue - State: closed - Opened by jgostick over 2 years ago - 1 comment
Labels: api

#649 - `pseudo_gravity_packing` does not work if some spheres already present

Issue - State: closed - Opened by jgostick over 2 years ago
Labels: bug, enhancement

#648 - pseudo_gravity and pseudo_electrostatic packing should have rsa in their names

Issue - State: closed - Opened by jgostick over 2 years ago - 1 comment
Labels: breaking change

#647 - `pseudo_gravity` and `pseudo_electrostatic` packings should have `shape` or `im` as arguments

Issue - State: closed - Opened by jgostick over 2 years ago - 1 comment
Labels: api