PMEAL/porespy issues and pull requests

#969 - Finalizing tortuosity_bt and rev functions

Pull Request - State: open - Opened by jgostick 8 days ago - 1 comment

#968 - Setting seed and testing porosity on all generated blobs images

Pull Request - State: closed - Opened by jgostick 22 days ago - 1 comment

#967 - Parallel extract

Pull Request - State: closed - Opened by jgostick 23 days ago - 10 comments

#966 - `two_point_correlation_fft` is only calculated for one orthant

Issue - State: open - Opened by amirDahari1 23 days ago - 1 comment

#965 - Consistency in the relation to length or size in arguments of generators

Issue - State: open - Opened by amirDahari1 23 days ago

#964 - Adding gravity to ibip

Pull Request - State: open - Opened by jgostick 24 days ago

#963 - fractal_noise porositiy as an argument

Issue - State: closed - Opened by amirDahari1 25 days ago - 3 comments

#962 - All distributions to uniform, fixes #961

Pull Request - State: closed - Opened by amirDahari1 25 days ago - 2 comments

#961 - blobs porosity is off for porosity different than 0.5

Issue - State: closed - Opened by amirDahari1 28 days ago

#959 - `fill_blind_pores` docstrings needs to be swapped

Issue - State: open - Opened by ma-sadeghi about 2 months ago
Labels: doc

#958 - Implement parallel extraction

Pull Request - State: closed - Opened by Arenhart about 2 months ago - 3 comments

#957 - pseudo_gravity_packing: for clearance=0 and smooth=True: empty voxel between spheres in some siuations

Issue - State: open - Opened by heinsimon about 2 months ago - 1 comment
Labels: bug

#955 - Examples are not rerun when deploying docs

Issue - State: open - Opened by ma-sadeghi 3 months ago
Labels: help wanted, doc

#954 - `find_h` needs some love

Issue - State: open - Opened by jgostick 3 months ago

#953 - Use keyword `method` instead of `mode`?

Issue - State: open - Opened by jgostick 3 months ago

#952 - Ensure all images attached to Results objects start with `im_`

Issue - State: open - Opened by jgostick 3 months ago
Labels: api

#951 - `overlay` needs modes

Issue - State: open - Opened by jgostick 3 months ago

#950 - `overlay` does not work in 2D

Issue - State: open - Opened by jgostick 3 months ago

#949 - Using `conn` consistently throughout

Issue - State: open - Opened by jgostick 3 months ago - 2 comments

#948 - Changes to random_spheres API

Pull Request - State: closed - Opened by jgostick 3 months ago - 1 comment

#947 - change volume_fraction to phi throughout

Issue - State: closed - Opened by jgostick 3 months ago - 2 comments
Labels: api

#946 - remove `return_spheres` arg from `random_spheres`

Issue - State: open - Opened by jgostick 3 months ago - 1 comment

#945 - The color map in the xray visualization function should be reversed

Issue - State: open - Opened by jgostick 3 months ago

#944 - Make sure all metrics return a `Results` object

Issue - State: open - Opened by jgostick 3 months ago

#943 - Remove MaxBall wrapper

Issue - State: open - Opened by jgostick 3 months ago
Labels: api

#942 - Replace `sierpinski_foam` with `sierpinski_foam2`, and drop the 2

Issue - State: open - Opened by jgostick 3 months ago
Labels: api

#941 - All tqdm instances should include a description.

Issue - State: open - Opened by jgostick 3 months ago

#940 - Add a `satn_to_time` function

Issue - State: open - Opened by jgostick 3 months ago
Labels: enhancement

#937 - normalized sem and xray views

Pull Request - State: closed - Opened by Anthero1 3 months ago - 1 comment

#936 - `spheres_from_coords` does not allow to add one sphere and adding spheres in same plane (not at 0!) will result in 2D-image

Issue - State: open - Opened by heinsimon 4 months ago - 2 comments

#935 - pseudo_gravity_packing: Not adding all possible spheres and input radius not correctly used

Issue - State: closed - Opened by heinsimon 4 months ago - 2 comments

#932 - Fix `points_to_spheres` bug in 3D

Pull Request - State: closed - Opened by heinsimon 4 months ago - 6 comments

#931 - Merge release -> dev to propagate version number bump

Pull Request - State: closed - Opened by github-actions[bot] 4 months ago
Labels: high priority

#930 - Prepare for release of v2.4.1

Pull Request - State: closed - Opened by ma-sadeghi 4 months ago - 1 comment

#929 - Refactor sem view

Pull Request - State: closed - Opened by Anthero1 4 months ago - 1 comment

#926 - Merge release -> dev to propagate version number bump

Pull Request - State: closed - Opened by github-actions[bot] 4 months ago - 1 comment
Labels: high priority

#925 - Prepare for release of v2.4

Pull Request - State: closed - Opened by ma-sadeghi 4 months ago - 1 comment

#924 - AI-assisted diffusive conductance model is failing, possibly a `tensorflow` API change

Issue - State: open - Opened by ma-sadeghi 4 months ago
Labels: bug

#923 - Refactor Actions, deprecate Python <3.10, hatch build system, and more

Pull Request - State: closed - Opened by ma-sadeghi 4 months ago - 1 comment
Labels: maint

#922 - Fixing pseudo packing functions

Pull Request - State: closed - Opened by jgostick 4 months ago - 3 comments

#921 - Migrate from setup.py to pyproject.toml

Pull Request - State: closed - Opened by ma-sadeghi 4 months ago - 1 comment

#920 - `tortuosity_gdd` is not deterministic

Issue - State: open - Opened by ma-sadeghi 4 months ago - 1 comment
Labels: bug

#919 - `tortuosity_gdd` returns throat tortusoity values in the wrong order

Issue - State: open - Opened by ma-sadeghi 4 months ago
Labels: bug

#917 - `points_to_spheres` not adding spheres correctly for 3D images

Issue - State: closed - Opened by heinsimon 4 months ago - 1 comment
Labels: bug

#916 - Redundant `edges` argument in `pseudo_gravity_packing`

Issue - State: closed - Opened by heinsimon 4 months ago - 1 comment
Labels: bug

#912 - Refactor `sem` to find location first non-zero

Issue - State: closed - Opened by jgostick 5 months ago - 1 comment

#911 - Adding micromodels

Pull Request - State: closed - Opened by jgostick 5 months ago

#909 - How to calculate surface roughness and specific surface area in a 3D generated PTL on Porespy?

Issue - State: closed - Opened by AMITGHOSH21999 5 months ago

#907 - Convert from setup.py to pyproject.toml

Issue - State: closed - Opened by jgostick 5 months ago
Labels: maint

#906 - Enhancing api

Pull Request - State: closed - Opened by jgostick 5 months ago - 1 comment

#905 - Improving local_thickness and porosimetry

Pull Request - State: open - Opened by jgostick 6 months ago - 1 comment

#902 - Error importing module: No module named 'matplotlib._docstring'

Issue - State: closed - Opened by ferokko 8 months ago - 3 comments

#899 - Updating the python versions for testing

Pull Request - State: closed - Opened by jgostick 8 months ago - 1 comment

#898 - Adding polydisperse_cylinders function to beta

Pull Request - State: closed - Opened by jgostick 8 months ago - 1 comment

#897 - `visualize.sem` should return a normalized image between 0 and 1

Issue - State: closed - Opened by jgostick 8 months ago
Labels: api

#896 - Improve speed and API of local thickness

Issue - State: open - Opened by jgostick 9 months ago - 1 comment
Labels: api

#895 - Add mode to `sierpinski_foam2` to handle how cropping is done

Issue - State: open - Opened by jgostick 9 months ago

#894 - List of examples we should make to populate the FAQ section

Issue - State: open - Opened by jgostick 9 months ago

#893 - Memory leak in `diffusive_size_factor_dns`

Issue - State: closed - Opened by jgostick 9 months ago

#891 - `setup_rich_logger` interferes with global logging config

Issue - State: closed - Opened by ma-sadeghi 9 months ago - 1 comment
Labels: bug

#889 - The porosity difference between PNM and Porespy

Issue - State: closed - Opened by morendong 9 months ago - 2 comments

#888 - `porosity` function return results object with and without filling blind pores

Issue - State: open - Opened by jgostick 9 months ago

#887 - Adding some micromodel generators to the beta module

Pull Request - State: closed - Opened by jgostick 10 months ago - 1 comment

#885 - Tidying up after some recent PRs

Pull Request - State: closed - Opened by jgostick 10 months ago - 1 comment

#884 - using _insert_disk method instead of dilating using edt

Pull Request - State: closed - Opened by jgostick 10 months ago - 1 comment

#882 - How to get grain size distribution through the image generated from PoreSpy

Issue - State: closed - Opened by morendong 11 months ago - 1 comment

#879 - SNOW network extraction

Issue - State: closed - Opened by morendong 11 months ago - 4 comments

#877 - Compute tortuosity using domain decomposition and network modeling

Pull Request - State: closed - Opened by rickyfann 11 months ago - 1 comment

#876 - Implement "electrode tortuosity"

Issue - State: open - Opened by ma-sadeghi 11 months ago
Labels: feature request

#875 - Visualization helper functions are inconsistent

Issue - State: open - Opened by ma-sadeghi 11 months ago
Labels: help wanted, easy, api

#874 - Adding ramp generator and local_diff filter to beta folder

Pull Request - State: closed - Opened by jgostick 11 months ago - 1 comment

#873 - Add `flux` and `tau_from_cmap` to simulations module

Pull Request - State: closed - Opened by ma-sadeghi 11 months ago - 1 comment

#872 - `align_image_with_openpnm` not working as intended

Issue - State: open - Opened by shillcoat 11 months ago - 2 comments

#871 - Add ablog plugin

Pull Request - State: closed - Opened by jgostick 12 months ago - 2 comments

#870 - Speeding up sphere insertions

Pull Request - State: closed - Opened by jgostick 12 months ago - 1 comment

#869 - Deprecate COMSOL IO?

Issue - State: open - Opened by ma-sadeghi 12 months ago
Labels: discussion, api

#868 - Export to COMSOL

Issue - State: closed - Opened by kunal0kumar0sinha 12 months ago - 1 comment

#867 - Adding beta module

Pull Request - State: closed - Opened by jgostick 12 months ago - 1 comment

#865 - Add `pc_to_seq` func

Pull Request - State: closed - Opened by jgostick 12 months ago - 1 comment

#864 - Readding tic and toc funcs to tools

Pull Request - State: closed - Opened by jgostick 12 months ago - 1 comment

#863 - Enhance `satn_profile` function

Pull Request - State: closed - Opened by jgostick 12 months ago

#862 - improve the `_insert_disks` methods by not generating spheres each time

Issue - State: closed - Opened by jgostick 12 months ago

#861 - Add a `pc_to_seq` function

Issue - State: closed - Opened by jgostick 12 months ago

#860 - Add a `size_to_pc` function?

Issue - State: open - Opened by jgostick 12 months ago
Labels: enhancement

#859 - Separate out `tools` and `utils`?

Issue - State: open - Opened by jgostick 12 months ago
Labels: discussion, api

#858 - Readd tic and toc to tools

Issue - State: closed - Opened by jgostick 12 months ago

#857 - saturation profile should return a Results object, not a tuple

Issue - State: closed - Opened by jgostick 12 months ago

#856 - saturation_profile should throw warning if requested saturation was not possible

Issue - State: closed - Opened by jgostick 12 months ago

#852 - Update `satn_profile` to accept an already thresholded image

Issue - State: closed - Opened by jgostick 12 months ago

#850 - Add flux tolerance as argument to `tortuosity_fd` (and possibly other effective solvers in the future)

Issue - State: open - Opened by ma-sadeghi about 1 year ago

#849 - Visualization functions should optionally accept `ax` as argument

Issue - State: open - Opened by ma-sadeghi about 1 year ago - 2 comments
Labels: feature request, easy

#848 - snow2 interested in only one phase

Issue - State: closed - Opened by thsmit about 1 year ago - 3 comments

#847 - Would be helpful if `shape=[100, 100, 0]` was treated the same as `shape=[100, 100]`

Issue - State: open - Opened by jgostick about 1 year ago

#845 - Don't forget to merge release back into dev!

Pull Request - State: closed - Opened by github-actions[bot] about 1 year ago
Labels: high priority

#844 - Merging dev into release for v2.3.0

Pull Request - State: closed - Opened by jgostick about 1 year ago - 2 comments

#843 - adding release.yml

Pull Request - State: closed - Opened by jgostick about 1 year ago
Labels: maint

#842 - Fine tuning satn/seq/size/pc funcs for imbibition

Pull Request - State: closed - Opened by jgostick about 1 year ago - 1 comment

#841 - Added logger decorator to all functions

Pull Request - State: open - Opened by Daniel-olaO about 1 year ago - 6 comments

#840 - Lower memory footprint for `porosimetry` and `local_thickness`

Issue - State: open - Opened by MathieuLeocmach about 1 year ago - 1 comment
Labels: performance

#839 - Added log message to the begining and ending of every functions

Pull Request - State: closed - Opened by Daniel-olaO about 1 year ago - 12 comments

GitHub / PMEAL/porespy issues and pull requests