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GitHub / OpenMS/streamlit-template issues and pull requests

#262 - deps: bump fonttools from 4.56.0 to 4.58.5

Pull Request - State: open - Opened by dependabot[bot] 25 days ago - 1 comment
Labels: dependencies, python

#261 - deps: bump narwhals from 1.32.0 to 1.46.0

Pull Request - State: open - Opened by dependabot[bot] 25 days ago - 1 comment
Labels: dependencies, python

#260 - deps: bump streamlit from 1.43.0 to 1.46.1

Pull Request - State: open - Opened by dependabot[bot] about 1 month ago - 1 comment
Labels: dependencies, python

#259 - deps: bump narwhals from 1.32.0 to 1.44.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago - 2 comments
Labels: dependencies, python

#258 - deps: bump streamlit from 1.43.0 to 1.46.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago - 2 comments
Labels: dependencies, python

#257 - deps: bump narwhals from 1.32.0 to 1.43.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 2 comments
Labels: dependencies, python

#256 - deps: bump fonttools from 4.56.0 to 4.58.4

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 2 comments
Labels: dependencies, python

#255 - deps: bump narwhals from 1.32.0 to 1.42.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 2 comments
Labels: dependencies, python

#254 - deps: bump fonttools from 4.56.0 to 4.58.2

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 2 comments
Labels: dependencies, python

#253 - deps: bump fonttools from 4.56.0 to 4.58.1

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago - 2 comments
Labels: dependencies, python

#252 - deps: bump protobuf from 5.29.4 to 6.31.1

Pull Request - State: open - Opened by dependabot[bot] 2 months ago - 1 comment
Labels: dependencies, python

#251 - Update Dockerfile for pyopenms-viz

Pull Request - State: closed - Opened by Arslan-Siraj 2 months ago - 2 comments

#250 - Fix Failing Tests

Pull Request - State: closed - Opened by t0mdavid-m 2 months ago - 2 comments

#249 - Update Licence

Pull Request - State: closed - Opened by t0mdavid-m 2 months ago - 3 comments

#248 - deps: bump narwhals from 1.32.0 to 1.41.0

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago - 2 comments
Labels: dependencies, python

#247 - deps: bump narwhals from 1.32.0 to 1.40.0

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago - 2 comments
Labels: dependencies, python

#245 - Make pyOpenMS build Optional

Issue - State: open - Opened by t0mdavid-m 3 months ago

#244 - Use manylinux instead of ubuntu for dockerfiles

Issue - State: open - Opened by t0mdavid-m 3 months ago

#243 - deps: bump fonttools from 4.56.0 to 4.58.0

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 2 comments
Labels: dependencies, python

#242 - deps: bump narwhals from 1.32.0 to 1.39.0

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 2 comments
Labels: dependencies, python

#241 - deps: bump streamlit from 1.43.0 to 1.45.1

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 2 comments
Labels: dependencies, python

#240 - deps: bump streamlit from 1.43.0 to 1.45.0

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 2 comments
Labels: dependencies, python

#239 - deps: bump narwhals from 1.32.0 to 1.38.0

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 2 comments
Labels: dependencies, python

#238 - deps: bump narwhals from 1.32.0 to 1.37.0

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 2 comments
Labels: dependencies, python

#237 - deps: bump narwhals from 1.32.0 to 1.35.0

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 2 comments
Labels: dependencies, python

#236 - deps: bump fonttools from 4.56.0 to 4.57.0

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 2 comments
Labels: dependencies, python

#235 - deps: bump packaging from 24.2 to 25.0

Pull Request - State: open - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies, python

#234 - Reset CAPTCHA input field

Pull Request - State: open - Opened by Leandro1302 3 months ago - 1 comment

#233 - TOPP tools not found when running template locally

Issue - State: closed - Opened by jisnoo123 4 months ago - 5 comments

#232 - feature : additional changes to the workspace directory deletion

Issue - State: open - Opened by achalbajpai 4 months ago - 1 comment

#229 - deps: bump streamlit from 1.43.0 to 1.44.1

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 4 comments
Labels: dependencies, python

#227 - TOPP execution: show log, just after clicking `start workflow`.

Pull Request - State: open - Opened by jitendra-ky 4 months ago - 1 comment

#226 - Reset CAPTCHA input field after incorrect submission

Issue - State: open - Opened by Leandro1302 4 months ago - 2 comments

#225 - Log not visible just after TOPP Workflow Run

Issue - State: open - Opened by jitendra-ky 4 months ago - 3 comments
Labels: GSoC-2025

#224 - Nicegui implementation

Issue - State: open - Opened by t0mdavid-m 4 months ago - 9 comments
Labels: GSoC-2025

#223 - 154-workflows-are-not-terminated

Pull Request - State: open - Opened by jitendra-ky 4 months ago - 1 comment

#222 - Fix Test Failures Due to Streamlit Version Update

Pull Request - State: open - Opened by namrathavpatil 4 months ago - 1 comment
Labels: review-required

#221 - Fix: Correct return type of get_parameters_from_json

Pull Request - State: closed - Opened by ZenMachina16 4 months ago - 1 comment

#220 - Fix/dependabot

Pull Request - State: closed - Opened by jcharkow 4 months ago - 1 comment

#219 - deps: bump captcha from 0.5.0 to 0.7.1

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies, python

#218 - deps: bump numpy from 1.26.4 to 2.0.2

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 4 comments
Labels: dependencies, python

#217 - deps: bump streamlit from 1.43.0 to 1.44.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 2 comments
Labels: dependencies, python

#216 - deps: bump protobuf from 5.29.4 to 6.30.2

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 4 comments
Labels: dependencies, python

#215 - deps: bump pyopenms from 3.2.0 to 3.3.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies, python

#214 - Feature: dependabot

Pull Request - State: closed - Opened by jcharkow 4 months ago - 1 comment

#213 - Fix: Correct return type of get_parameters_from_json in ParameterManager.py

Pull Request - State: closed - Opened by Imama-Kainat 4 months ago - 3 comments

#212 - Bug: Incorrect Return Type Annotation in ParameterManager

Issue - State: open - Opened by Imama-Kainat 4 months ago - 1 comment

#211 - Tests Failing Due to Streamlit Version Update

Issue - State: open - Opened by jcharkow 4 months ago - 12 comments
Labels: GSoC-2025

#210 - Throw exception on ERROR and terminate TOPP workflow run

Pull Request - State: open - Opened by subCode321 4 months ago - 1 comment

#209 - Add comprehensive tests for TOPP workflow parameter page

Pull Request - State: closed - Opened by blenbot 4 months ago - 2 comments

#208 - fix : OpenMS Executable Release Artifact Upload Issue

Pull Request - State: closed - Opened by achalbajpai 4 months ago - 2 comments

#207 - update PyInstaller documentation and remove outdated sections.

Pull Request - State: open - Opened by jitendra-ky 4 months ago - 1 comment

#206 - Addition to Issue #169; Update new logo: build icon and page svg

Pull Request - State: closed - Opened by ketan1406 4 months ago - 2 comments

#205 - Testing `window exec work with pyinstaller with latest version of streamlit`

Pull Request - State: closed - Opened by jitendra-ky 4 months ago - 1 comment

#204 - OpenMS Executable cannot be added as a release artifact

Issue - State: closed - Opened by t0mdavid-m 4 months ago - 8 comments
Labels: GSoC-2025

#203 - Tests for TOPP tools page

Issue - State: open - Opened by Srajald 4 months ago

#202 - feat : add welcome modal to improve user-experience

Pull Request - State: closed - Opened by achalbajpai 4 months ago - 4 comments

#201 - feature : enhance user experience

Issue - State: closed - Opened by achalbajpai 4 months ago - 1 comment

#200 - fix: disable interactions on the openms

Pull Request - State: closed - Opened by achalbajpai 4 months ago - 10 comments

#199 - fix : disable any interactions on openms logo

Issue - State: closed - Opened by achalbajpai 4 months ago - 4 comments

#198 - feat: Made sidebar collapsible

Pull Request - State: closed - Opened by subCode321 4 months ago - 1 comment

#197 - Make sidebar collapsible for better view

Issue - State: closed - Opened by subCode321 4 months ago

#196 - Issue #138: Add configurable theme settings and custom CSS injection

Pull Request - State: closed - Opened by onemriganka 4 months ago - 4 comments

#195 - Added panning and zooming options.

Pull Request - State: open - Opened by subCode321 4 months ago - 44 comments

#194 - Add panning and zooming options for chromatograms

Issue - State: open - Opened by subCode321 4 months ago - 1 comment

#193 - pyopenms installation error through pip

Issue - State: open - Opened by jisnoo123 5 months ago - 7 comments

#192 - fix: Prevent Streamlit email prompt on first run by providing credent…

Pull Request - State: closed - Opened by achalbajpai 5 months ago - 9 comments

#191 - Fix the documentation issue #174

Pull Request - State: open - Opened by Imama-Kainat 5 months ago - 9 comments
Labels: Stale

#190 - fix: auto-clear captcha input on wrong entry

Pull Request - State: closed - Opened by SanjayUG 5 months ago - 2 comments

#189 - Clear captcha everytime it reruns and also add pip install guide for linux

Pull Request - State: closed - Opened by jisnoo123 5 months ago - 2 comments

#188 - Fix Documentation References (#174) - Work in Progress

Pull Request - State: closed - Opened by Imama-Kainat 5 months ago - 1 comment

#187 - Clear captcha once the user has entered the wrong value

Issue - State: closed - Opened by jisnoo123 5 months ago - 5 comments
Labels: GSoC-2025

#186 - fix: increase timeout for test launch function test to 30 seconds

Pull Request - State: closed - Opened by achalbajpai 5 months ago - 2 comments

#185 - feat: automatically load example data in pyOpenMS workflow

Pull Request - State: closed - Opened by achalbajpai 5 months ago - 2 comments

#184 - Unify Example Data UX in TOPP and pyOpenMS Workflows

Issue - State: closed - Opened by t0mdavid-m 5 months ago - 3 comments
Labels: GSoC-2025

#183 - window exec work with pyinstaller issue #180

Pull Request - State: closed - Opened by Srajald 5 months ago - 3 comments

#182 - Add new MSI dialog to select workspaces folder path

Pull Request - State: open - Opened by subCode321 5 months ago - 6 comments

#181 - Added a Stop/Close Button to sidebar to solve Issue #151

Pull Request - State: open - Opened by Ayushmaan06 5 months ago - 1 comment
Labels: minor-changes-needed

#180 - check if window exec work with pyinstaller with latest version of streamlit

Issue - State: closed - Opened by Arslan-Siraj 5 months ago - 4 comments
Labels: enhancement, GSoC-2025, Windows executable

#179 - Bugfix : added warning to reject empty workspace names

Pull Request - State: closed - Opened by subCode321 5 months ago - 2 comments

#178 - Streamlit template website crashes on entering empty workspace name

Issue - State: closed - Opened by subCode321 5 months ago - 2 comments
Labels: GSoC-2025

#177 - Test cases

Pull Request - State: closed - Opened by Srajald 5 months ago - 1 comment

#176 - Fix Boolean Parameter Handling in TOPP Tools (#90)

Pull Request - State: closed - Opened by Imama-Kainat 5 months ago - 11 comments
Labels: Stale

#175 - feat: add cpu and ram visualiser

Pull Request - State: closed - Opened by subCode321 5 months ago - 4 comments

#174 - Fix Documentation

Issue - State: open - Opened by t0mdavid-m 5 months ago - 15 comments
Labels: GSoC-2025

#173 - Ask for workspace location during installation

Issue - State: open - Opened by t0mdavid-m 5 months ago - 2 comments
Labels: GSoC-2025, Windows executable

#172 - feat: enhanced the visualization of plot theme & application theme

Pull Request - State: closed - Opened by achalbajpai 5 months ago - 8 comments

#171 - solved #169 by relpacing the logo

Pull Request - State: closed - Opened by Nishantrde 5 months ago - 2 comments

#170 - fix : refactor the branding of OpenMS

Pull Request - State: closed - Opened by achalbajpai 5 months ago - 8 comments

#169 - Update OpenMS Logos

Issue - State: closed - Opened by jcharkow 5 months ago - 13 comments
Labels: GSoC-2025

#168 - Feature : Add Theme Toggle Button to Sidebar

Issue - State: open - Opened by achalbajpai 5 months ago - 22 comments
Labels: GSoC-2025

#167 - Additional tests files added

Pull Request - State: closed - Opened by Srajald 5 months ago - 3 comments

#166 - Implement Auto-Shutdown When Browser Closes (solves Issue #151)

Pull Request - State: closed - Opened by Ayushmaan06 5 months ago - 7 comments
Labels: review-required

#165 - Updated the dockerfile with new OpenMS version issue #128

Pull Request - State: open - Opened by Srajald 5 months ago - 2 comments
Labels: read-to-merge-3.4

#164 - Update timeout

Pull Request - State: closed - Opened by subCode321 5 months ago - 2 comments

#163 - fix : Workflows are not terminated if errors are detected

Pull Request - State: closed - Opened by asterisk-ragavan 5 months ago - 6 comments
Labels: Stale

#162 - GUI tests are failing intermittently

Issue - State: closed - Opened by t0mdavid-m 5 months ago - 1 comment
Labels: GSoC-2025