OpenMS/pyopenms_viz issues and pull requests

#47 - Binning seems to really shift the spectrum m/z

Issue - State: open - Opened by jcharkow 29 days ago

#46 - update: docs with changed location of spyo example data

Pull Request - State: closed - Opened by singjc about 1 month ago

#45 - Spectrum plot optimization

Pull Request - State: closed - Opened by axelwalter about 1 month ago - 2 comments
Labels: enhancement, Review effort [1-5]: 3

#44 - Bokeh LinePlot linewidth not being set properly

Issue - State: open - Opened by jcharkow about 2 months ago

#43 - feature: compute peak apex

Pull Request - State: closed - Opened by jcharkow about 2 months ago - 1 comment

#42 - Docs: Add Spyogenes multiplot

Pull Request - State: closed - Opened by jcharkow about 2 months ago - 1 comment

#41 - Add annotation labels for 3D plots

Pull Request - State: closed - Opened by t0mdavid-m about 2 months ago - 6 comments

#40 - Patch/html annotation bug

Pull Request - State: closed - Opened by singjc about 2 months ago
Labels: bug, bug fix

#39 - Major Code Refactor: Clean Up Parameters

Pull Request - State: open - Opened by jcharkow about 2 months ago

#38 - Add Tests for plotting

Pull Request - State: closed - Opened by jcharkow about 2 months ago - 2 comments

#37 - Patch/warn ungroupped new

Pull Request - State: closed - Opened by jcharkow about 2 months ago

#36 - PLOTLY Spectrum Annotations not rendering properly

Issue - State: closed - Opened by jcharkow about 2 months ago
Labels: bug

#35 - Patch/warn ungroupped

Pull Request - State: closed - Opened by jcharkow about 2 months ago - 2 comments
Labels: documentation, enhancement, Review effort [1-5]: 3, bug_fix

#34 - Revert "Feature: Add option to aggregate dataframe before plotting"

Pull Request - State: closed - Opened by jcharkow about 2 months ago - 2 comments
Labels: enhancement, Review effort [1-5]: 2

#33 - remove explcit TOC

Pull Request - State: closed - Opened by jcharkow 2 months ago - 2 comments
Labels: documentation, Review effort [1-5]: 1

#32 - Patch/annotations with select nans

Pull Request - State: closed - Opened by singjc 2 months ago

#31 - Docs first version

Pull Request - State: closed - Opened by jcharkow 2 months ago - 2 comments
Labels: documentation, enhancement, Review effort [1-5]: 3

#30 - Sequence plot

Pull Request - State: open - Opened by jcharkow 2 months ago - 5 comments
Labels: enhancement, Review effort [1-5]: 4

#29 - Plot peptide sequence with matched fragments indicated

Pull Request - State: closed - Opened by bittremieux 2 months ago - 3 comments

#28 - DRAFT - Add Documentation

Pull Request - State: closed - Opened by jcharkow 2 months ago - 2 comments
Labels: documentation, Review effort [1-5]: 3

#27 - Add Documentation

Pull Request - State: closed - Opened by jcharkow 2 months ago - 3 comments
Labels: documentation, enhancement, Review effort [1-5]: 4, Other

#26 - remove: python 3.9 from project toml

Pull Request - State: closed - Opened by singjc 2 months ago - 2 comments
Labels: Review effort [1-5]: 1, configuration changes

#25 - Error loading ms_matplotlib backend with python 3.9

Issue - State: closed - Opened by huhehaotecrystal 2 months ago - 3 comments

#24 - Feature: Add option to aggregate dataframe before plotting

Pull Request - State: closed - Opened by jcharkow 2 months ago - 4 comments
Labels: enhancement, Review effort [1-5]: 3, bug fix

#23 - change binning aggregation from "mean" to "sum"

Pull Request - State: closed - Opened by jcharkow 3 months ago - 5 comments
Labels: enhancement, Review effort [1-5]: 2

#22 - Tutorials

Pull Request - State: closed - Opened by singjc 3 months ago - 2 comments
Labels: documentation, Review effort [1-5]: 2

#21 - Patch/font sizes

Pull Request - State: closed - Opened by singjc 3 months ago - 3 comments
Labels: enhancement, Review effort [1-5]: 3, bug fix

#20 - Add/3d peakmap

Pull Request - State: closed - Opened by singjc 3 months ago - 2 comments
Labels: enhancement, bug fix, Review effort [1-5]: 4

#19 - Patch/spectrum bin peaks

Pull Request - State: closed - Opened by singjc 3 months ago - 2 comments
Labels: enhancement, Review effort [1-5]: 3

#18 - add: dragmode and template to layout

Pull Request - State: closed - Opened by singjc 3 months ago - 2 comments
Labels: enhancement, Review effort [1-5]: 1

#17 - Add: gh actions

Pull Request - State: closed - Opened by singjc 4 months ago - 2 comments
Labels: documentation, enhancement, Review effort [1-5]: 3

#16 - Spectrum Plots

Pull Request - State: closed - Opened by axelwalter 4 months ago - 11 comments

#15 - [Discussion] Base Plot Arguments

Issue - State: closed - Opened by jcharkow 4 months ago - 6 comments

#14 - DOCS: add doc template and API

Pull Request - State: closed - Opened by jcharkow 4 months ago - 1 comment

#13 - Cleanup (changes forgot)

Pull Request - State: closed - Opened by jcharkow 4 months ago

#12 - [DRAFT] Documentation

Pull Request - State: closed - Opened by jcharkow 4 months ago

#11 - restructure package

Pull Request - State: closed - Opened by jcharkow 5 months ago - 1 comment

#10 - Patch/config param interpolation

Pull Request - State: closed - Opened by singjc 5 months ago

#9 - Refactor fixes

Pull Request - State: closed - Opened by jcharkow 5 months ago - 1 comment

#8 - DRAFT ADD: bounding box annotation for feature_heatmap

Pull Request - State: closed - Opened by singjc 5 months ago

#7 - Refactoring Bugs

Issue - State: closed - Opened by singjc 5 months ago - 1 comment

#6 - add: alphatims tutorial

Pull Request - State: closed - Opened by singjc 5 months ago

#5 - Patches to refactoring

Pull Request - State: closed - Opened by jcharkow 5 months ago - 3 comments

#4 - [DRAFT] refactor plotting backends

Pull Request - State: closed - Opened by singjc 5 months ago

#3 - MSSpectrum plots

Pull Request - State: closed - Opened by axelwalter 6 months ago - 1 comment

#2 - Add/chrom plotting

Pull Request - State: closed - Opened by singjc 7 months ago

#1 - Add/datastructures

Pull Request - State: closed - Opened by singjc 7 months ago - 10 comments

GitHub / OpenMS/pyopenms_viz issues and pull requests